RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ACSBG1Q96GR2 724 aa15.46■□□□□ 0.07
VPS33A-208ENST00000543633 THAP9Q9H5L6 903 aa15.46■□□□□ 0.07
VPS33A-208ENST00000543633 ABCB6Q9NP58 842 aa15.46■□□□□ 0.07
VPS33A-208ENST00000543633 COL1A1P02452 1464 aaPredicted RBP15.46■□□□□ 0.06
VPS33A-208ENST00000543633 WNT7AO00755 349 aa15.45■□□□□ 0.06
VPS33A-208ENST00000543633 PRDM1O75626 825 aa15.45■□□□□ 0.06
VPS33A-208ENST00000543633 NDUFA10O95299 355 aa15.45■□□□□ 0.06
VPS33A-208ENST00000543633 CASP1P29466 404 aa15.45■□□□□ 0.06
VPS33A-208ENST00000543633 PFKFB3Q16875 520 aaPredicted RBP15.45■□□□□ 0.06
VPS33A-208ENST00000543633 WWC2Q6AWC2 1192 aa15.45■□□□□ 0.06
VPS33A-208ENST00000543633 TRAPPC11Q7Z392 1133 aa15.45■□□□□ 0.06
VPS33A-208ENST00000543633 ADGRA1Q86SQ6 560 aa15.45■□□□□ 0.06
VPS33A-208ENST00000543633 OR8K1Q8NGG5 319 aa15.45■□□□□ 0.06
VPS33A-208ENST00000543633 ZSWIM4Q9H7M6 989 aa15.45■□□□□ 0.06
VPS33A-208ENST00000543633 PDE11AQ9HCR9 933 aa15.45■□□□□ 0.06
VPS33A-208ENST00000543633 EPN1Q9Y6I3 576 aaPredicted RBP15.45■□□□□ 0.06
VPS33A-208ENST00000543633 A0A0U1RQJ8 604 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 NTSR2O95665 410 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 MAP9Q49MG5 647 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 ATRIPQ8WXE1 791 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 MAGEF1Q9HAY2 307 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 TAB2Q9NYJ8 693 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 TARSL2A2RTX5 802 aaKnown RBP15.44■□□□□ 0.06
VPS33A-208ENST00000543633 SNAP23O00161 211 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 ZBTB22O15209 634 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 KCNQ2O43526 872 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 NLRP5P59047 1200 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 VSNL1P62760 191 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 CKAP4Q07065 602 aaKnown RBP15.44■□□□□ 0.06
VPS33A-208ENST00000543633 STIM1Q13586 685 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 CASP8Q14790 479 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 HSP90B2PQ58FF3 399 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 LEKR1Q6ZMV7 388 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 ADSSL1Q8N142 457 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 RETREG2Q8NC44 543 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 IQCDQ96DY2 449 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 MTRQ99707 1265 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 VPS16Q9H269 839 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 CCDC87Q9NVE4 849 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 TMEM51Q9NW97 253 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 TRPC5Q9UL62 973 aaPredicted RBP15.44■□□□□ 0.06
VPS33A-208ENST00000543633 CAPN11Q9UMQ6 739 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 MYH1P12882 1939 aa15.44■□□□□ 0.06
VPS33A-208ENST00000543633 PARP1P09874 1014 aaKnown RBP15.43■□□□□ 0.06
VPS33A-208ENST00000543633 KIF5BP33176 963 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 PPP1R2P41236 205 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 LMAN1P49257 510 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 AARSP49588 968 aaKnown RBP eCLIP15.43■□□□□ 0.06
VPS33A-208ENST00000543633 KRT83P78385 493 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 MEA1Q16626 185 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 SRBD1Q8N5C6 995 aaKnown RBP15.43■□□□□ 0.06
VPS33A-208ENST00000543633 MB21D1Q8N884 522 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 CUEDC2Q9H467 287 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 ANO9A1A5B4 782 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 CAMTA2O94983 1202 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 UBXN1Q04323 297 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 MCM6Q14566 821 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 TSR1Q2NL82 804 aaKnown RBP15.43■□□□□ 0.06
VPS33A-208ENST00000543633 PAPD7Q5XG87 772 aaKnown RBP15.43■□□□□ 0.06
VPS33A-208ENST00000543633 CTR9Q6PD62 1173 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 PIK3AP1Q6ZUJ8 805 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 C4orf32Q8N8J7 132 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 ZNF507Q8TCN5 953 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 RUBCNQ92622 972 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 SLF1Q9BQI6 1058 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 NUP58Q9BVL2 599 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 DISC1Q9NRI5 854 aa15.43■□□□□ 0.06
VPS33A-208ENST00000543633 LUC7L2Q9Y383 392 aaKnown RBP15.43■□□□□ 0.06
VPS33A-208ENST00000543633 CCDC88AQ3V6T2 1871 aa15.42■□□□□ 0.06
VPS33A-208ENST00000543633 LAD1O00515 517 aa15.42■□□□□ 0.06
VPS33A-208ENST00000543633 CAPN2P17655 700 aa15.42■□□□□ 0.06
VPS33A-208ENST00000543633 STAT6P42226 847 aa15.42■□□□□ 0.06
VPS33A-208ENST00000543633 PRCPP42785 496 aa15.42■□□□□ 0.06
VPS33A-208ENST00000543633 DNM2P50570 870 aa15.42■□□□□ 0.06
VPS33A-208ENST00000543633 USP14P54578 494 aa15.42■□□□□ 0.06
VPS33A-208ENST00000543633 SBK1Q52WX2 424 aa15.42■□□□□ 0.06
VPS33A-208ENST00000543633 GALNT17Q6IS24 598 aa15.42■□□□□ 0.06
VPS33A-208ENST00000543633 BLZF1Q9H2G9 400 aa15.42■□□□□ 0.06
VPS33A-208ENST00000543633 VPS18Q9P253 973 aa15.42■□□□□ 0.06
VPS33A-208ENST00000543633 REXO2Q9Y3B8 237 aaKnown RBP15.42■□□□□ 0.06
VPS33A-208ENST00000543633 CYLC1P35663 651 aaPredicted RBP15.41■□□□□ 0.06
VPS33A-208ENST00000543633 IL17AQ16552 155 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 ZNF831Q5JPB2 1677 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 IRF2BP1Q8IU81 584 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 CCDC170Q8IYT3 715 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 DAGLBQ8NCG7 672 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 CCSER1Q9C0I3 900 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 ATP8A2Q9NTI2 1148 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 ARPP21Q9UBL0 812 aaPredicted RBP15.41■□□□□ 0.06
VPS33A-208ENST00000543633 ABCF2Q9UG63 623 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 TTC26A0AVF1 554 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 RNF225M0QZC1 329 aaPredicted RBP15.41■□□□□ 0.06
VPS33A-208ENST00000543633 PSMA7O14818 248 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 RHOBTB3O94955 611 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 RHOXF2BP0C7M4 288 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 PRPHP41219 470 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 CAVIN4Q5BKX8 364 aa15.41■□□□□ 0.06
VPS33A-208ENST00000543633 NOM1Q5C9Z4 860 aaKnown RBP15.41■□□□□ 0.06
VPS33A-208ENST00000543633 INTS5Q6P9B9 1019 aaKnown RBP15.41■□□□□ 0.06
VPS33A-208ENST00000543633 BLIDQ8IZY5 108 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms