RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 CCDC85BQ15834 202 aaPredicted RBP22.05■■□□□ 1.12
RAP1B-229ENST00000543393 MSL3Q8N5Y2 521 aaKnown RBP22.05■■□□□ 1.12
RAP1B-229ENST00000543393 ZHX1Q9UKY1 873 aaPredicted RBP22.05■■□□□ 1.12
RAP1B-229ENST00000543393 SYNGAP1Q96PV0 1343 aa22.05■■□□□ 1.12
RAP1B-229ENST00000543393 PRKAB2O43741 272 aa22.04■■□□□ 1.12
RAP1B-229ENST00000543393 DUSP11O75319 330 aaKnown RBP22.04■■□□□ 1.12
RAP1B-229ENST00000543393 ACRP10323 421 aa22.04■■□□□ 1.12
RAP1B-229ENST00000543393 CDK8P49336 464 aa22.04■■□□□ 1.12
RAP1B-229ENST00000543393 MRPS5P82675 430 aaKnown RBP22.04■■□□□ 1.12
RAP1B-229ENST00000543393 ADGRE1Q14246 886 aa22.04■■□□□ 1.12
RAP1B-229ENST00000543393 ERC1Q8IUD2 1116 aa22.04■■□□□ 1.12
RAP1B-229ENST00000543393 TMEM199Q8N511 208 aa22.04■■□□□ 1.12
RAP1B-229ENST00000543393 GOPCQ9HD26 462 aa22.04■■□□□ 1.12
RAP1B-229ENST00000543393 CYP2D7A0A087X1C5 515 aa22.03■■□□□ 1.12
RAP1B-229ENST00000543393 GOLIM4O00461 696 aa22.03■■□□□ 1.12
RAP1B-229ENST00000543393 RAD21O60216 631 aa22.03■■□□□ 1.12
RAP1B-229ENST00000543393 ASGR1P07306 291 aa22.03■■□□□ 1.12
RAP1B-229ENST00000543393 C6orf222P0C671 652 aaPredicted RBP22.03■■□□□ 1.12
RAP1B-229ENST00000543393 CST5P28325 142 aaPredicted RBP22.03■■□□□ 1.12
RAP1B-229ENST00000543393 FAM83BQ5T0W9 1011 aa22.03■■□□□ 1.12
RAP1B-229ENST00000543393 MAMDC4Q6UXC1 1216 aa22.03■■□□□ 1.12
RAP1B-229ENST00000543393 ZNF365Q70YC5 407 aa22.03■■□□□ 1.12
RAP1B-229ENST00000543393 VTI1AQ96AJ9 217 aa22.03■■□□□ 1.12
RAP1B-229ENST00000543393 UHRF1Q96T88 793 aaPredicted RBP22.03■■□□□ 1.12
RAP1B-229ENST00000543393 DNAJC2Q99543 621 aaKnown RBP22.03■■□□□ 1.12
RAP1B-229ENST00000543393 PPP1R12CQ9BZL4 782 aa22.03■■□□□ 1.12
RAP1B-229ENST00000543393 KANSL2Q9H9L4 492 aa22.03■■□□□ 1.12
RAP1B-229ENST00000543393 IL1RAPL2Q9NP60 686 aa22.03■■□□□ 1.12
RAP1B-229ENST00000543393 NCOR1O75376 2440 aa22.02■■□□□ 1.12
RAP1B-229ENST00000543393 IGFBP4P22692 258 aa22.02■■□□□ 1.12
RAP1B-229ENST00000543393 C12orf60Q5U649 245 aa22.02■■□□□ 1.12
RAP1B-229ENST00000543393 CEP85Q6P2H3 762 aa22.02■■□□□ 1.12
RAP1B-229ENST00000543393 PSRC1Q6PGN9 363 aaPredicted RBP22.02■■□□□ 1.12
RAP1B-229ENST00000543393 ITPRIPQ8IWB1 547 aa22.02■■□□□ 1.12
RAP1B-229ENST00000543393 PCSK9Q8NBP7 692 aaKnown RBP22.02■■□□□ 1.12
RAP1B-229ENST00000543393 DDX11Q96FC9 970 aa22.02■■□□□ 1.12
RAP1B-229ENST00000543393 ATP8A2Q9NTI2 1148 aa22.02■■□□□ 1.12
RAP1B-229ENST00000543393 RIPK3Q9Y572 518 aa22.02■■□□□ 1.12
RAP1B-229ENST00000543393 GBF1Q92538 1859 aa22.02■■□□□ 1.12
RAP1B-229ENST00000543393 MCM3APO60318 1980 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 CHD7Q9P2D1 2997 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 DNAJC25-GNG10A0A024R161 153 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 ARVCFO00192 962 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 APBB1O00213 710 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 ADCY6O43306 1168 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 MBD4O95243 580 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 SLFNL1Q499Z3 407 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 SNRNP48Q6IEG0 339 aaKnown RBP22.01■■□□□ 1.11
RAP1B-229ENST00000543393 C16orf86Q6ZW13 317 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 FAM126BQ8IXS8 530 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 FTSJ3Q8IY81 847 aaKnown RBP22.01■■□□□ 1.11
RAP1B-229ENST00000543393 TEX13BQ9BXU2 312 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 MSRAQ9UJ68 235 aa22.01■■□□□ 1.11
RAP1B-229ENST00000543393 A0A0U1RQG5 324 aaPredicted RBP22■■□□□ 1.11
RAP1B-229ENST00000543393 USP17L12C9JPN9 530 aa22■■□□□ 1.11
RAP1B-229ENST00000543393 USP17L21D6R901 530 aa22■■□□□ 1.11
RAP1B-229ENST00000543393 PLA2G5P39877 138 aa22■■□□□ 1.11
RAP1B-229ENST00000543393 ACVR2BQ13705 512 aa22■■□□□ 1.11
RAP1B-229ENST00000543393 RAB30Q15771 203 aa22■■□□□ 1.11
RAP1B-229ENST00000543393 IL27Q8NEV9 243 aa22■■□□□ 1.11
RAP1B-229ENST00000543393 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22■■□□□ 1.11
RAP1B-229ENST00000543393 SPC25Q9HBM1 224 aa22■■□□□ 1.11
RAP1B-229ENST00000543393 RLBP1P12271 317 aa21.99■■□□□ 1.11
RAP1B-229ENST00000543393 ZNF467Q7Z7K2 595 aaPredicted RBP21.99■■□□□ 1.11
RAP1B-229ENST00000543393 AMOTL1Q8IY63 956 aa21.99■■□□□ 1.11
RAP1B-229ENST00000543393 HERVK_113Q902F9 699 aa21.99■■□□□ 1.11
RAP1B-229ENST00000543393 NUP88Q99567 741 aaPredicted RBP21.99■■□□□ 1.11
RAP1B-229ENST00000543393 SLF1Q9BQI6 1058 aa21.99■■□□□ 1.11
RAP1B-229ENST00000543393 UPF3AQ9H1J1 476 aaKnown RBP21.99■■□□□ 1.11
RAP1B-229ENST00000543393 NKX2-4Q9H2Z4 354 aa21.99■■□□□ 1.11
RAP1B-229ENST00000543393 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.99■■□□□ 1.11
RAP1B-229ENST00000543393 CXXC1Q9P0U4 656 aaPredicted RBP21.99■■□□□ 1.11
RAP1B-229ENST00000543393 REV3LO60673 3130 aa21.99■■□□□ 1.11
RAP1B-229ENST00000543393 TCF20Q9UGU0 1960 aaKnown RBP21.98■■□□□ 1.11
RAP1B-229ENST00000543393 TLR3O15455 904 aaKnown RBP21.98■■□□□ 1.11
RAP1B-229ENST00000543393 ADD2P35612 726 aa21.98■■□□□ 1.11
RAP1B-229ENST00000543393 SLC4A3P48751 1232 aa21.98■■□□□ 1.11
RAP1B-229ENST00000543393 GJA9P57773 515 aa21.98■■□□□ 1.11
RAP1B-229ENST00000543393 CCDC144BQ3MJ40 725 aa21.98■■□□□ 1.11
RAP1B-229ENST00000543393 GNASQ5JWF2 1037 aa21.98■■□□□ 1.11
RAP1B-229ENST00000543393 RHPN1Q8TCX5 695 aa21.98■■□□□ 1.11
RAP1B-229ENST00000543393 ABHD16BQ9H3Z7 469 aa21.98■■□□□ 1.11
RAP1B-229ENST00000543393 SLC28A3Q9HAS3 691 aa21.98■■□□□ 1.11
RAP1B-229ENST00000543393 IL23AQ9NPF7 189 aa21.98■■□□□ 1.11
RAP1B-229ENST00000543393 CYP2C18P33260 490 aa21.97■■□□□ 1.11
RAP1B-229ENST00000543393 FAM122AQ96E09 287 aa21.97■■□□□ 1.11
RAP1B-229ENST00000543393 YBX2Q9Y2T7 364 aaKnown RBP21.97■■□□□ 1.11
RAP1B-229ENST00000543393 CD4P01730 458 aa21.96■■□□□ 1.11
RAP1B-229ENST00000543393 FGBP02675 491 aa21.96■■□□□ 1.11
RAP1B-229ENST00000543393 HSP90AB4PQ58FF6 505 aa21.96■■□□□ 1.11
RAP1B-229ENST00000543393 CPXCR1Q8N123 301 aa21.96■■□□□ 1.11
RAP1B-229ENST00000543393 FGD4Q96M96 766 aa21.96■■□□□ 1.11
RAP1B-229ENST00000543393 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.96■■□□□ 1.11
RAP1B-229ENST00000543393 GREB1LQ9C091 1923 aaPredicted RBP21.96■■□□□ 1.11
RAP1B-229ENST00000543393 BDP1A6H8Y1 2624 aa21.95■■□□□ 1.11
RAP1B-229ENST00000543393 XIRP2A4UGR9 3374 aa21.95■■□□□ 1.1
RAP1B-229ENST00000543393 CTAGE5O15320 804 aa21.95■■□□□ 1.1
RAP1B-229ENST00000543393 CTR9Q6PD62 1173 aa21.95■■□□□ 1.1
RAP1B-229ENST00000543393 CLASRPQ8N2M8 674 aaKnown RBP21.95■■□□□ 1.1
RAP1B-229ENST00000543393 DDRGK1Q96HY6 314 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms