RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 ROBO3Q96MS0 1386 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 TRIM43BA6NCK2 446 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 F5H6K3 240 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 GPAA1O43292 621 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 PRDM1O75626 825 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 NDUFB10O96000 172 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 ZNF865P0CJ78 1059 aaPredicted RBP15.29■□□□□ 0.04
GPN3-203ENST00000543199 COPB2P35606 906 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 TLE2Q04725 743 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 KLRC3Q07444 240 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 RNF180Q86T96 592 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 TRIM43Q96BQ3 446 aaPredicted RBP15.29■□□□□ 0.04
GPN3-203ENST00000543199 GPATCH3Q96I76 525 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 TEX13BQ9BXU2 312 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 CNPY2Q9Y2B0 182 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 DIS3Q9Y2L1 958 aaKnown RBP15.29■□□□□ 0.04
GPN3-203ENST00000543199 RIPK3Q9Y572 518 aa15.29■□□□□ 0.04
GPN3-203ENST00000543199 APPP05067 770 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 AKR1A1P14550 325 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 TDO2P48775 406 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 ZNF697Q5TEC3 545 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 C1orf53Q5VUE5 145 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 GIMAP6Q6P9H5 292 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 CPXCR1Q8N123 301 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 NYAP2Q9P242 653 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 CLIP2Q9UDT6 1046 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 PHF24Q9UPV7 400 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 M0R2C6 588 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 RNF113AO15541 343 aaKnown RBP15.28■□□□□ 0.04
GPN3-203ENST00000543199 FAM109BQ6ICB4 259 aaPredicted RBP15.28■□□□□ 0.04
GPN3-203ENST00000543199 KIFC2Q96AC6 838 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 DDX11Q96FC9 970 aa15.28■□□□□ 0.04
GPN3-203ENST00000543199 A0A1W2PQ45 241 aaPredicted RBP15.27■□□□□ 0.03
GPN3-203ENST00000543199 A0A1W2PQY0 241 aa15.27■□□□□ 0.03
GPN3-203ENST00000543199 PQBP1O60828 265 aaKnown RBP15.27■□□□□ 0.03
GPN3-203ENST00000543199 CLTBP09497 229 aa15.27■□□□□ 0.03
GPN3-203ENST00000543199 ITGB8P26012 769 aa15.27■□□□□ 0.03
GPN3-203ENST00000543199 PRPF38AQ8NAV1 312 aaKnown RBP15.27■□□□□ 0.03
GPN3-203ENST00000543199 CEP95Q96GE4 821 aa15.27■□□□□ 0.03
GPN3-203ENST00000543199 DCTPP1Q9H773 170 aa15.27■□□□□ 0.03
GPN3-203ENST00000543199 ZHX1Q9UKY1 873 aaPredicted RBP15.27■□□□□ 0.03
GPN3-203ENST00000543199 CTDP1Q9Y5B0 961 aaPredicted RBP15.27■□□□□ 0.03
GPN3-203ENST00000543199 IGKV6D-41A0A0C4DH26 115 aa15.26■□□□□ 0.03
GPN3-203ENST00000543199 ADAMTS4O75173 837 aa15.26■□□□□ 0.03
GPN3-203ENST00000543199 GNAT2P19087 354 aa15.26■□□□□ 0.03
GPN3-203ENST00000543199 ZNF444Q8N0Y2 327 aaPredicted RBP15.26■□□□□ 0.03
GPN3-203ENST00000543199 LRRC47Q8N1G4 583 aaKnown RBP15.26■□□□□ 0.03
GPN3-203ENST00000543199 RAVER2Q9HCJ3 691 aaKnown RBP15.26■□□□□ 0.03
GPN3-203ENST00000543199 TACC3Q9Y6A5 838 aa15.26■□□□□ 0.03
GPN3-203ENST00000543199 VCANP13611 3396 aa15.26■□□□□ 0.03
GPN3-203ENST00000543199 ZBED4O75132 1171 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 SNAI1O95863 264 aaPredicted RBP15.25■□□□□ 0.03
GPN3-203ENST00000543199 ZFYP08048 801 aaPredicted RBP15.25■□□□□ 0.03
GPN3-203ENST00000543199 ZNF287Q9HBT7 754 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 SYNGAP1Q96PV0 1343 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 SYNRGQ9UMZ2 1314 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 MYH4Q9Y623 1939 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 DNAJC25-GNG10A0A024R161 153 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 NEFLP07196 543 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 IFNL3Q8IZI9 196 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 MSL3Q8N5Y2 521 aaKnown RBP15.25■□□□□ 0.03
GPN3-203ENST00000543199 SEC62Q99442 399 aaKnown RBP15.25■□□□□ 0.03
GPN3-203ENST00000543199 SLC38A10Q9HBR0 1119 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 STARD7Q9NQZ5 370 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 MTMR4Q9NYA4 1195 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 FAM184BQ9ULE4 1060 aa15.25■□□□□ 0.03
GPN3-203ENST00000543199 ISY1Q9ULR0 285 aaKnown RBP15.25■□□□□ 0.03
GPN3-203ENST00000543199 MYADML2A6NDP7 307 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 PATL2C9JE40 543 aaKnown RBP15.24■□□□□ 0.03
GPN3-203ENST00000543199 ATP2A1O14983 1001 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 TTLL1O95922 423 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 TSPY3P0CV98 308 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 TSPY8P0CW00 308 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 RAG1P15918 1043 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 ACLYP53396 1101 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 EPHB4P54760 987 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 MAMDC4Q6UXC1 1216 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.24■□□□□ 0.03
GPN3-203ENST00000543199 ANKRD35Q8N283 1001 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 CHMP4CQ96CF2 233 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 CDX2Q99626 313 aaPredicted RBP15.24■□□□□ 0.03
GPN3-203ENST00000543199 HOMER2Q9NSB8 354 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 TMEM39AQ9NV64 488 aa15.24■□□□□ 0.03
GPN3-203ENST00000543199 IRX5P78411 483 aaPredicted RBP15.23■□□□□ 0.03
GPN3-203ENST00000543199 KCNA10Q16322 511 aa15.23■□□□□ 0.03
GPN3-203ENST00000543199 OTUD7AQ8TE49 926 aaPredicted RBP15.23■□□□□ 0.03
GPN3-203ENST00000543199 NUP133Q8WUM0 1156 aa15.23■□□□□ 0.03
GPN3-203ENST00000543199 MKL1Q969V6 931 aa15.23■□□□□ 0.03
GPN3-203ENST00000543199 RNPC3Q96LT9 517 aaKnown RBP15.23■□□□□ 0.03
GPN3-203ENST00000543199 NACAP1Q9BZK3 213 aa15.23■□□□□ 0.03
GPN3-203ENST00000543199 FEM1BQ9UK73 627 aa15.23■□□□□ 0.03
GPN3-203ENST00000543199 PRUNE2Q8WUY3 3088 aa15.23■□□□□ 0.03
GPN3-203ENST00000543199 KIAA0355O15063 1070 aa15.22■□□□□ 0.03
GPN3-203ENST00000543199 ADCY6O43306 1168 aa15.22■□□□□ 0.03
GPN3-203ENST00000543199 PDE4BQ07343 736 aa15.22■□□□□ 0.03
GPN3-203ENST00000543199 FAAP100Q0VG06 881 aa15.22■□□□□ 0.03
GPN3-203ENST00000543199 ACVR2BQ13705 512 aa15.22■□□□□ 0.03
GPN3-203ENST00000543199 LRRFIP1Q32MZ4 808 aaKnown RBP15.22■□□□□ 0.03
GPN3-203ENST00000543199 SLFN13Q68D06 897 aa15.22■□□□□ 0.03
GPN3-203ENST00000543199 GMCL1P1Q8NEA9 526 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms