RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 CLIP2Q9UDT6 1046 aa14.16□□□□□ -0.14
PTPN6-219ENST00000542848 SYNPO2Q9UMS6 1093 aa14.16□□□□□ -0.14
PTPN6-219ENST00000542848 ZBED4O75132 1171 aa14.15□□□□□ -0.14
PTPN6-219ENST00000542848 NDUFB10O96000 172 aa14.15□□□□□ -0.14
PTPN6-219ENST00000542848 APPP05067 770 aa14.15□□□□□ -0.14
PTPN6-219ENST00000542848 TAL1P17542 331 aaPredicted RBP14.15□□□□□ -0.14
PTPN6-219ENST00000542848 TDO2P48775 406 aa14.15□□□□□ -0.14
PTPN6-219ENST00000542848 SNRNP48Q6IEG0 339 aaKnown RBP14.15□□□□□ -0.14
PTPN6-219ENST00000542848 MAMDC4Q6UXC1 1216 aa14.15□□□□□ -0.14
PTPN6-219ENST00000542848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTPN6-219ENST00000542848 BADQ92934 168 aa14.15□□□□□ -0.14
PTPN6-219ENST00000542848 DDX11Q96FC9 970 aa14.15□□□□□ -0.14
PTPN6-219ENST00000542848 TSEN34Q9BSV6 310 aaKnown RBP14.15□□□□□ -0.14
PTPN6-219ENST00000542848 PRDM5Q9NQX1 630 aaPredicted RBP14.15□□□□□ -0.14
PTPN6-219ENST00000542848 PDLIM7Q9NR12 457 aa14.15□□□□□ -0.14
PTPN6-219ENST00000542848 CNPY2Q9Y2B0 182 aa14.15□□□□□ -0.14
PTPN6-219ENST00000542848 RIPK3Q9Y572 518 aa14.15□□□□□ -0.14
PTPN6-219ENST00000542848 TACC3Q9Y6A5 838 aa14.15□□□□□ -0.14
PTPN6-219ENST00000542848 TTC41PQ6P2S7 1318 aa14.15□□□□□ -0.15
PTPN6-219ENST00000542848 SYNGAP1Q96PV0 1343 aa14.15□□□□□ -0.15
PTPN6-219ENST00000542848 DNAJC25-GNG10A0A024R161 153 aa14.14□□□□□ -0.15
PTPN6-219ENST00000542848 TRIM43BA6NCK2 446 aa14.14□□□□□ -0.15
PTPN6-219ENST00000542848 PGK1P00558 417 aa14.14□□□□□ -0.15
PTPN6-219ENST00000542848 TLE2Q04725 743 aa14.14□□□□□ -0.15
PTPN6-219ENST00000542848 SHHQ15465 462 aa14.14□□□□□ -0.15
PTPN6-219ENST00000542848 TSHZ3Q63HK5 1081 aa14.14□□□□□ -0.15
PTPN6-219ENST00000542848 ZNF467Q7Z7K2 595 aaPredicted RBP14.14□□□□□ -0.15
PTPN6-219ENST00000542848 IFNL3Q8IZI9 196 aa14.14□□□□□ -0.15
PTPN6-219ENST00000542848 TRIM43Q96BQ3 446 aaPredicted RBP14.14□□□□□ -0.15
PTPN6-219ENST00000542848 EPB41L4AQ9HCS5 686 aaPredicted RBP14.14□□□□□ -0.15
PTPN6-219ENST00000542848 MTMR4Q9NYA4 1195 aa14.14□□□□□ -0.15
PTPN6-219ENST00000542848 FEM1BQ9UK73 627 aa14.14□□□□□ -0.15
PTPN6-219ENST00000542848 CTDP1Q9Y5B0 961 aaPredicted RBP14.14□□□□□ -0.15
PTPN6-219ENST00000542848 MYO9BQ13459 2157 aa14.14□□□□□ -0.15
PTPN6-219ENST00000542848 M0R2C6 588 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 ERC2O15083 957 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 ADAMTS4O75173 837 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 SNAI1O95863 264 aaPredicted RBP14.13□□□□□ -0.15
PTPN6-219ENST00000542848 TTLL1O95922 423 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 FDX1P10109 184 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 PDE4BQ07343 736 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 SH3RF1Q7Z6J0 888 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 GMCL1P1Q8NEA9 526 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 NEDD1Q8NHV4 660 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 CEP95Q96GE4 821 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 NACAP1Q9BZK3 213 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 SLC38A10Q9HBR0 1119 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 FBXO40Q9UH90 709 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 FAM184BQ9ULE4 1060 aa14.13□□□□□ -0.15
PTPN6-219ENST00000542848 PLIN4Q96Q06 1357 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 A0A1W2PQ45 241 aaPredicted RBP14.12□□□□□ -0.15
PTPN6-219ENST00000542848 A0A1W2PQY0 241 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 PRDM1O75626 825 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 SLC3A2P08195 630 aaKnown RBP14.12□□□□□ -0.15
PTPN6-219ENST00000542848 CLTBP09497 229 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 OAZ1P54368 228 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 C9orf50Q5SZB4 431 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 ZNF697Q5TEC3 545 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 CPXCR1Q8N123 301 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 CHST13Q8NET6 341 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 NUP133Q8WUM0 1156 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 KIFC2Q96AC6 838 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 TOX2Q96NM4 488 aa14.12□□□□□ -0.15
PTPN6-219ENST00000542848 EYSQ5T1H1 3165 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 MOXD2PA6NHM9 499 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 KIAA0355O15063 1070 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 DUSP11O75319 330 aaKnown RBP14.11□□□□□ -0.15
PTPN6-219ENST00000542848 TSPY3P0CV98 308 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 TSPY8P0CW00 308 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 BMP3P12645 472 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 SLC4A3P48751 1232 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 ANKRD35Q8N283 1001 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 KLHDC9Q8NEP7 349 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 PI4K2BQ8TCG2 481 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 GUCD1Q96NT3 240 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 ABHD16BQ9H3Z7 469 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 RAVER2Q9HCJ3 691 aaKnown RBP14.11□□□□□ -0.15
PTPN6-219ENST00000542848 SYNRGQ9UMZ2 1314 aa14.11□□□□□ -0.15
PTPN6-219ENST00000542848 ACLYP53396 1101 aa14.1□□□□□ -0.15
PTPN6-219ENST00000542848 SMAD3P84022 425 aaKnown RBP14.1□□□□□ -0.15
PTPN6-219ENST00000542848 TFAP4Q01664 338 aa14.1□□□□□ -0.15
PTPN6-219ENST00000542848 ACVR2BQ13705 512 aa14.1□□□□□ -0.15
PTPN6-219ENST00000542848 PPP4R3BQ5MIZ7 849 aa14.1□□□□□ -0.15
PTPN6-219ENST00000542848 ZMYM1Q5SVZ6 1142 aa14.1□□□□□ -0.15
PTPN6-219ENST00000542848 SLFN13Q68D06 897 aa14.1□□□□□ -0.15
PTPN6-219ENST00000542848 CCSAPQ6IQ19 270 aaPredicted RBP14.1□□□□□ -0.15
PTPN6-219ENST00000542848 ANKRD33Q7Z3H0 272 aa14.1□□□□□ -0.15
PTPN6-219ENST00000542848 CHURC1Q8WUH1 139 aa14.1□□□□□ -0.15
PTPN6-219ENST00000542848 SEC62Q99442 399 aaKnown RBP14.1□□□□□ -0.15
PTPN6-219ENST00000542848 NAPBQ9H115 298 aa14.1□□□□□ -0.15
PTPN6-219ENST00000542848 STARD7Q9NQZ5 370 aa14.1□□□□□ -0.15
PTPN6-219ENST00000542848 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.1□□□□□ -0.15
PTPN6-219ENST00000542848 ZHX1Q9UKY1 873 aaPredicted RBP14.1□□□□□ -0.15
PTPN6-219ENST00000542848 PCDHB15Q9Y5E8 787 aa14.1□□□□□ -0.15
PTPN6-219ENST00000542848 LCTP09848 1927 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 PRUNE2Q8WUY3 3088 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 DCDC2CA8MYV0 355 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 PLA2G6O60733 806 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 PQBP1O60828 265 aaKnown RBP14.09□□□□□ -0.15
PTPN6-219ENST00000542848 RAG1P15918 1043 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms