RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, human

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD4-209	ENST00000542717	BTBD7	Q9P203	1132 aa		4.14	□□□□□ -1.75
CHD4-209	ENST00000542717	ANKFY1	Q9P2R3	1169 aa		4.14	□□□□□ -1.75
CHD4-209	ENST00000542717	FAM184B	Q9ULE4	1060 aa		4.14	□□□□□ -1.75
CHD4-209	ENST00000542717	USP18	Q9UMW8	372 aa		4.14	□□□□□ -1.75
CHD4-209	ENST00000542717	TIMELESS	Q9UNS1	1208 aa		4.14	□□□□□ -1.75
CHD4-209	ENST00000542717	MAP3K2	Q9Y2U5	619 aa		4.14	□□□□□ -1.75
CHD4-209	ENST00000542717	MAPK8IP3	Q9UPT6	1336 aa		4.14	□□□□□ -1.75
CHD4-209	ENST00000542717		A0A1B0GUL6	1792 aa		4.14	□□□□□ -1.75
CHD4-209	ENST00000542717	ZNF292	O60281	2723 aa		4.14	□□□□□ -1.75
CHD4-209	ENST00000542717	DNAH14	Q0VDD8	3507 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	TBC1D12	O60347	775 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	B4GALT4	O60513	344 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	DUSP11	O75319	330 aa	Known RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	BAIAP3	O94812	1187 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	IGHA2	P01877	340 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	LDHB	P07195	334 aa	Known RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	ASNS	P08243	561 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	ZNF865	P0CJ78	1059 aa	Predicted RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	CYP2C9	P11712	490 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	FCER1A	P12319	257 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	ERCC3	P19447	782 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	RBM25	P49756	843 aa	Known RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	IRX5	P78411	483 aa	Predicted RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	ZNF200	P98182	395 aa	Predicted RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	RING1	Q06587	406 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	CCDC57	Q2TAC2	916 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	CWF19L2	Q2TBE0	894 aa	Known RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	CXCL17	Q6UXB2	119 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	NOL8	Q76FK4	1167 aa	Known RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	GPR161	Q8N6U8	529 aa	Known RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	WDR66	Q8TBY9	1149 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	SECISBP2L	Q93073	1101 aa	Known RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	KIF12	Q96FN5	646 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	ZNF594	Q96JF6	807 aa	Predicted RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	AGBL1	Q96MI9	1066 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	HNRNPAB	Q99729	332 aa	Known RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	TINF2	Q9BSI4	451 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	IDI2	Q9BXS1	227 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	TRIM34	Q9BYJ4	488 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	INCENP	Q9NQS7	918 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	BABAM1	Q9NWV8	329 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	CLSPN	Q9HAW4	1339 aa		4.13	□□□□□ -1.75
CHD4-209	ENST00000542717	ZFYVE26	Q68DK2	2539 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717		H7C1W4	665 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	STK25	O00506	426 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	TBX10	O75333	385 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	GJB5	O95377	273 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	PGK2	P07205	417 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	CSF1R	P07333	972 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	SUPT20HL2	P0C7V6	817 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	RFX1	P22670	979 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	SP100	P23497	879 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	CST5	P28325	142 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	RFC2	P35250	354 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	CLCN5	P51795	746 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	RRP1	P56182	461 aa	Known RBP	4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	BEX3	Q00994	111 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	MTMR3	Q13615	1198 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	GCKR	Q14397	625 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	CBX2	Q14781	532 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	EPC2	Q52LR7	807 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	DUSP27	Q5VZP5	1158 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	FBXO33	Q7Z6M2	555 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	CCDC105	Q8IYK2	499 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	UBALD2	Q8IYN6	164 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	DTWD2	Q8NBA8	298 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	KREMEN2	Q8NCW0	462 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	RIN2	Q8WYP3	895 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	VWCE	Q96DN2	955 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	PHF7	Q9BWX1	381 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	PLA2G12B	Q9BX93	195 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	SPATC1L	Q9H0A9	340 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	SIL1	Q9H173	461 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	MROH8	Q9H579	483 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	DDX4	Q9NQI0	724 aa	Known RBP	4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	EMILIN3	Q9NT22	766 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	TNKS	O95271	1327 aa		4.12	□□□□□ -1.75
CHD4-209	ENST00000542717	MYO7A	Q13402	2215 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	DLG5	Q8TDM6	1919 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	SPDYE16	A6NNV3	312 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	NEURL1B	A8MQ27	555 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	C1QTNF9B	B2RNN3	333 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717		H3BNC9	293 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	LINC01565	O15544	149 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	ZEB2	O60315	1214 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	KIN	O60870	393 aa	Known RBP	4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	CABYR	O75952	493 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	GDF11	O95390	407 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	IGKV5-2	P06315	115 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	HOXB7	P09629	217 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	C1QTNF9	P0C862	333 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	PRDX5	P30044	214 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	USP14	P54578	494 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	RIPK4	P57078	832 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	WDR5	P61964	334 aa	Known RBP	4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	DEFB103A	P81534	67 aa		4.11	□□□□□ -1.75
CHD4-209	ENST00000542717	HYAL1	Q12794	435 aa		4.11	□□□□□ -1.75

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