RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 MICU3Q86XE3 530 aa14.32□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 CCDC83Q8IWF9 413 aa14.32□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 TMEM47Q9BQJ4 181 aa14.32□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SH2D4AQ9H788 454 aa14.32□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 CIZ1Q9ULV3 898 aaPredicted RBP14.32□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 KIF3AQ9Y496 699 aa14.32□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 CPLX1O14810 134 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 PPP1R12BO60237 982 aaPredicted RBP14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 GH2P01242 217 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 GRK4P32298 578 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 MAGEA10P43363 369 aaPredicted RBP14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 GNAQP50148 359 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 ST3GAL1Q11201 340 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 RTN1Q16799 776 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 MIGA2Q7L4E1 593 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 FANCBQ8NB91 859 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 RGS22Q8NE09 1264 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 BRI3BPQ8WY22 251 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 LARP6Q9BRS8 491 aaKnown RBP14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SENP2Q9HC62 589 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 ARHGEF10LQ9HCE6 1279 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 ZMYND8Q9ULU4 1186 aaPredicted RBP14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 NAP1L2Q9ULW6 460 aaPredicted RBP14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 STK36Q9NRP7 1315 aa14.31□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 GDF11O95390 407 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SGPL1O95470 568 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SNHG28P0DPA3 235 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 GUCY1A2P33402 732 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 STK3Q13188 491 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 KIF22Q14807 665 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 GRM4Q14833 912 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SEPT2Q15019 361 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 NECAB1Q8N987 351 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 GMCL1P1Q8NEA9 526 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 FAM161BQ96MY7 647 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 LZTS2Q9BRK4 669 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SMC3Q9UQE7 1217 aa14.3□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 EEF2P13639 858 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 IFNAR1P17181 557 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 PDCP20941 246 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SMARCA1P28370 1054 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 CTGFP29279 349 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 DDIT3P35638 169 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 IREB2P48200 963 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SLC4A3P48751 1232 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 CCT2P78371 535 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 RRP1BQ14684 758 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 RAB3GAP1Q15042 981 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 ASPRV1Q53RT3 343 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 C7orf61Q8IZ16 206 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SCYL3Q8IZE3 742 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 FAM43AQ8N2R8 423 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 NSUN7Q8NE18 718 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 NUP133Q8WUM0 1156 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 WRNIP1Q96S55 665 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SRRDQ9UH36 339 aa14.29□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 MGAMO43451 1857 aa14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 TLR2O60603 784 aa14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 ECM2O94769 699 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 SLURP2P0DP57 97 aa14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 GPATCH4Q5T3I0 446 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 DCAF4Q8WV16 495 aa14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 UBE2OQ9C0C9 1292 aaKnown RBP14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 UNC93B1Q9H1C4 597 aa14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 AS3MTQ9HBK9 375 aa14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 FAM217BQ9NTX9 383 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 CLIP2Q9UDT6 1046 aa14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 TMX2Q9Y320 296 aa14.28□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 PHIPQ8WWQ0 1821 aa14.27□□□□□ -0.12
CACNA1C-IT3-201ENST00000542680 PTPDC1A2A3K4 754 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 PALM3A6NDB9 673 aaPredicted RBP14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 USP17L5A8MUK1 530 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 PARP1P09874 1014 aaKnown RBP14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 PDHBP11177 359 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 NTRK3Q16288 839 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 TJAP1Q5JTD0 557 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 TMTC3Q6ZXV5 915 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 TRIM22Q8IYM9 498 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 GMCL1Q96IK5 515 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 CDX2Q99626 313 aaPredicted RBP14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 MYL10Q9BUA6 226 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 WDR18Q9BV38 432 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 RNF26Q9BY78 433 aaPredicted RBP14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 NCOA5Q9HCD5 579 aaKnown RBP14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 GOPCQ9HD26 462 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 PICK1Q9NRD5 415 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 MUC6Q6W4X9 2439 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 MYH6P13533 1939 aa14.27□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 DNAH12Q6ZR08 3092 aa14.26□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 USP2O75604 605 aaPredicted RBP14.26□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 CTDNEP1O95476 244 aa14.26□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 CAPN2P17655 700 aa14.26□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 RXRAP19793 462 aa14.26□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 GJB2P29033 226 aa14.26□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 CDC27P30260 824 aa14.26□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 ADD1P35611 737 aaKnown RBP14.26□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 UBXN2AP68543 259 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms