RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PNMA3Q9UL41 463 aa26.86■■□□□ 1.89
HOMER3-205ENST00000542541 BTBD19C9JJ37 291 aa26.85■■□□□ 1.89
HOMER3-205ENST00000542541 MAP2K2P36507 400 aa26.85■■□□□ 1.89
HOMER3-205ENST00000542541 ANP32AP39687 249 aaKnown RBP26.85■■□□□ 1.89
HOMER3-205ENST00000542541 TM4SF4P48230 202 aa26.85■■□□□ 1.89
HOMER3-205ENST00000542541 BECN1Q14457 450 aa26.85■■□□□ 1.89
HOMER3-205ENST00000542541 TTBK2Q6IQ55 1244 aa26.85■■□□□ 1.89
HOMER3-205ENST00000542541 NECAB1Q8N987 351 aa26.85■■□□□ 1.89
HOMER3-205ENST00000542541 SLF1Q9BQI6 1058 aa26.85■■□□□ 1.89
HOMER3-205ENST00000542541 PDHXO00330 501 aa26.84■■□□□ 1.89
HOMER3-205ENST00000542541 CDKL5O76039 1030 aa26.84■■□□□ 1.89
HOMER3-205ENST00000542541 VEGFBP49765 207 aa26.84■■□□□ 1.89
HOMER3-205ENST00000542541 UBA5Q9GZZ9 404 aa26.84■■□□□ 1.89
HOMER3-205ENST00000542541 PTPRFP10586 1907 aa26.84■■□□□ 1.89
HOMER3-205ENST00000542541 MYPNQ86TC9 1320 aa26.84■■□□□ 1.89
HOMER3-205ENST00000542541 SLC16A2P36021 539 aa26.83■■□□□ 1.89
HOMER3-205ENST00000542541 PTPN18Q99952 460 aa26.83■■□□□ 1.89
HOMER3-205ENST00000542541 SPZ1Q9BXG8 430 aa26.83■■□□□ 1.89
HOMER3-205ENST00000542541 THSD7BQ9C0I4 1608 aa26.83■■□□□ 1.89
HOMER3-205ENST00000542541 PLEKHA8P1O95397 391 aa26.83■■□□□ 1.88
HOMER3-205ENST00000542541 FDX1P10109 184 aa26.83■■□□□ 1.88
HOMER3-205ENST00000542541 SYDE2Q5VT97 1194 aa26.83■■□□□ 1.88
HOMER3-205ENST00000542541 IFNL1Q8IU54 200 aa26.83■■□□□ 1.88
HOMER3-205ENST00000542541 FAM43AQ8N2R8 423 aa26.83■■□□□ 1.88
HOMER3-205ENST00000542541 KIFC2Q96AC6 838 aa26.83■■□□□ 1.88
HOMER3-205ENST00000542541 ASCC2Q9H1I8 757 aaPredicted RBP26.83■■□□□ 1.88
HOMER3-205ENST00000542541 FBXO28Q9NVF7 368 aa26.83■■□□□ 1.88
HOMER3-205ENST00000542541 PPP1R9AQ9ULJ8 1098 aa26.83■■□□□ 1.88
HOMER3-205ENST00000542541 LOC285556D6RIA3 1793 aa26.82■■□□□ 1.88
HOMER3-205ENST00000542541 AOC2O75106 756 aa26.82■■□□□ 1.88
HOMER3-205ENST00000542541 IFNAR1P17181 557 aa26.82■■□□□ 1.88
HOMER3-205ENST00000542541 CCDC83Q8IWF9 413 aa26.82■■□□□ 1.88
HOMER3-205ENST00000542541 SRBD1Q8N5C6 995 aaKnown RBP26.82■■□□□ 1.88
HOMER3-205ENST00000542541 RIOX1Q9H6W3 641 aa26.82■■□□□ 1.88
HOMER3-205ENST00000542541 RBM19Q9Y4C8 960 aaKnown RBP26.82■■□□□ 1.88
HOMER3-205ENST00000542541 DSG3P32926 999 aa26.81■■□□□ 1.88
HOMER3-205ENST00000542541 SAMD1Q6SPF0 538 aaPredicted RBP26.81■■□□□ 1.88
HOMER3-205ENST00000542541 ADGRF4Q8IZF3 695 aa26.81■■□□□ 1.88
HOMER3-205ENST00000542541 CCDC82Q8N4S0 544 aa26.81■■□□□ 1.88
HOMER3-205ENST00000542541 ZIC5Q96T25 663 aa26.81■■□□□ 1.88
HOMER3-205ENST00000542541 LLPHQ9BRT6 129 aaKnown RBP26.81■■□□□ 1.88
HOMER3-205ENST00000542541 PRR12Q9ULL5 1215 aa26.81■■□□□ 1.88
HOMER3-205ENST00000542541 NTRK3Q16288 839 aa26.8■■□□□ 1.88
HOMER3-205ENST00000542541 CMTR1Q8N1G2 835 aaKnown RBP26.8■■□□□ 1.88
HOMER3-205ENST00000542541 CPVLQ9H3G5 476 aa26.8■■□□□ 1.88
HOMER3-205ENST00000542541 VAT1LQ9HCJ6 419 aa26.8■■□□□ 1.88
HOMER3-205ENST00000542541 RBM27Q9P2N5 1060 aaKnown RBP26.8■■□□□ 1.88
HOMER3-205ENST00000542541 IGF2BP3O00425 579 aaKnown RBP eCLIP26.79■■□□□ 1.88
HOMER3-205ENST00000542541 ALDH1A1P00352 501 aa26.79■■□□□ 1.88
HOMER3-205ENST00000542541 AKAP17AQ02040 695 aaKnown RBP26.79■■□□□ 1.88
HOMER3-205ENST00000542541 NBPF11Q86T75 865 aa26.79■■□□□ 1.88
HOMER3-205ENST00000542541 TRIM22Q8IYM9 498 aa26.79■■□□□ 1.88
HOMER3-205ENST00000542541 RRP36Q96EU6 259 aaKnown RBP26.79■■□□□ 1.88
HOMER3-205ENST00000542541 PARK7Q99497 189 aaKnown RBP26.79■■□□□ 1.88
HOMER3-205ENST00000542541 P2RX7Q99572 595 aaKnown RBP26.79■■□□□ 1.88
HOMER3-205ENST00000542541 CTDP1Q9Y5B0 961 aaPredicted RBP26.79■■□□□ 1.88
HOMER3-205ENST00000542541 FUT2Q10981 343 aa26.79■■□□□ 1.88
HOMER3-205ENST00000542541 GTF3C2Q8WUA4 911 aaPredicted RBP26.79■■□□□ 1.88
HOMER3-205ENST00000542541 JMJD4Q9H9V9 463 aa26.79■■□□□ 1.88
HOMER3-205ENST00000542541 CYTH3O43739 400 aa26.78■■□□□ 1.88
HOMER3-205ENST00000542541 ZBED4O75132 1171 aa26.78■■□□□ 1.88
HOMER3-205ENST00000542541 SSRP1Q08945 709 aaKnown RBP26.78■■□□□ 1.88
HOMER3-205ENST00000542541 CUL4AQ13619 759 aa26.78■■□□□ 1.88
HOMER3-205ENST00000542541 LBX2Q6XYB7 198 aa26.78■■□□□ 1.88
HOMER3-205ENST00000542541 MB21D1Q8N884 522 aa26.78■■□□□ 1.88
HOMER3-205ENST00000542541 SMCR8Q8TEV9 937 aaPredicted RBP26.78■■□□□ 1.88
HOMER3-205ENST00000542541 RNF26Q9BY78 433 aaPredicted RBP26.78■■□□□ 1.88
HOMER3-205ENST00000542541 ADAMTS5Q9UNA0 930 aa26.78■■□□□ 1.88
HOMER3-205ENST00000542541 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.78■■□□□ 1.88
HOMER3-205ENST00000542541 PCNTO95613 3336 aa26.77■■□□□ 1.88
HOMER3-205ENST00000542541 SPDYE16A6NNV3 312 aaPredicted RBP26.77■■□□□ 1.88
HOMER3-205ENST00000542541 HERVK_113P62684 666 aa26.77■■□□□ 1.88
HOMER3-205ENST00000542541 DNAJC5GQ8N7S2 189 aa26.77■■□□□ 1.88
HOMER3-205ENST00000542541 SEC63Q9UGP8 760 aaKnown RBP26.77■■□□□ 1.88
HOMER3-205ENST00000542541 V9GY48 417 aaPredicted RBP26.77■■□□□ 1.88
HOMER3-205ENST00000542541 VWA5AO00534 786 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 PRPF3O43395 683 aaKnown RBP26.76■■□□□ 1.87
HOMER3-205ENST00000542541 ST3GAL1Q11201 340 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 ATG4CQ96DT6 458 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 PNMA2Q9UL42 364 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 CNTNAP5Q8WYK1 1306 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 ZBTB5O15062 677 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 FMNL1O95466 1100 aaPredicted RBP26.76■■□□□ 1.87
HOMER3-205ENST00000542541 CTDNEP1O95476 244 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 HSP90AA1P07900 732 aaKnown RBP26.76■■□□□ 1.87
HOMER3-205ENST00000542541 CYP2C8P10632 490 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 TAF1CQ15572 869 aaPredicted RBP26.76■■□□□ 1.87
HOMER3-205ENST00000542541 SLC35G1Q2M3R5 365 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 NSUN7Q8NE18 718 aaKnown RBP26.76■■□□□ 1.87
HOMER3-205ENST00000542541 PHKBQ93100 1093 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 MTMR8Q96EF0 704 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 SLC26A6Q9BXS9 759 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 RANBP17Q9H2T7 1088 aaKnown RBP26.76■■□□□ 1.87
HOMER3-205ENST00000542541 SLC38A10Q9HBR0 1119 aa26.76■■□□□ 1.87
HOMER3-205ENST00000542541 PNMA6FA0A0J9YX94 578 aa26.75■■□□□ 1.87
HOMER3-205ENST00000542541 GCLCP48506 637 aaPredicted RBP26.75■■□□□ 1.87
HOMER3-205ENST00000542541 HMGN5P82970 282 aaKnown RBP26.75■■□□□ 1.87
HOMER3-205ENST00000542541 TRAF1Q13077 416 aa26.75■■□□□ 1.87
HOMER3-205ENST00000542541 CDC37Q16543 378 aaPredicted RBP26.75■■□□□ 1.87
HOMER3-205ENST00000542541 HOMER1Q86YM7 354 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms