RNA–Protein interactions for RNA: ENST00000541846.5

LMO3-228, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LMO3, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-228ENST00000541846 hCG_1642624A0A1W2PR95 340 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 TESPA1A2RU30 521 aaPredicted RBP14.47□□□□□ -0.09
LMO3-228ENST00000541846 TMEM232C9JQI7 657 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 DEXIO95424 95 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 SLC10A3P09131 477 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 SYT1P21579 422 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 SLC16A2P36021 539 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 FOSBP53539 338 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 C1QTNF8P60827 252 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 AKAP17AQ02040 695 aaKnown RBP14.47□□□□□ -0.09
LMO3-228ENST00000541846 PKP1Q13835 747 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 PKN1Q16512 942 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 LARP1BQ659C4 914 aaKnown RBP14.47□□□□□ -0.09
LMO3-228ENST00000541846 PIBF1Q8WXW3 757 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 LPAR1Q92633 364 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 ALG1Q9BT22 464 aa14.47□□□□□ -0.09
LMO3-228ENST00000541846 WDR46O15213 610 aaKnown RBP14.46□□□□□ -0.09
LMO3-228ENST00000541846 VCAM1P19320 739 aa14.46□□□□□ -0.09
LMO3-228ENST00000541846 PDCP20941 246 aa14.46□□□□□ -0.09
LMO3-228ENST00000541846 GTF2A2P52657 109 aa14.46□□□□□ -0.09
LMO3-228ENST00000541846 HMGCS2P54868 508 aa14.46□□□□□ -0.09
LMO3-228ENST00000541846 SNAPC2Q13487 334 aa14.46□□□□□ -0.09
LMO3-228ENST00000541846 DEFB115Q30KQ5 88 aa14.46□□□□□ -0.09
LMO3-228ENST00000541846 BTNL9Q6UXG8 535 aa14.46□□□□□ -0.09
LMO3-228ENST00000541846 ADGRF4Q8IZF3 695 aa14.46□□□□□ -0.09
LMO3-228ENST00000541846 WASF1Q92558 559 aa14.46□□□□□ -0.09
LMO3-228ENST00000541846 VAT1LQ9HCJ6 419 aa14.46□□□□□ -0.09
LMO3-228ENST00000541846 RBM27Q9P2N5 1060 aaKnown RBP14.46□□□□□ -0.09
LMO3-228ENST00000541846 STX6O43752 255 aa14.45□□□□□ -0.1
LMO3-228ENST00000541846 STAT2P52630 851 aa14.45□□□□□ -0.1
LMO3-228ENST00000541846 IKQ13123 557 aaPredicted RBP14.45□□□□□ -0.1
LMO3-228ENST00000541846 SYDE2Q5VT97 1194 aa14.45□□□□□ -0.1
LMO3-228ENST00000541846 FASTKD5Q7L8L6 764 aaKnown RBP14.45□□□□□ -0.1
LMO3-228ENST00000541846 PROCA1Q8NCQ7 364 aaPredicted RBP14.45□□□□□ -0.1
LMO3-228ENST00000541846 RRP36Q96EU6 259 aaKnown RBP14.45□□□□□ -0.1
LMO3-228ENST00000541846 PIGSQ96S52 555 aa14.45□□□□□ -0.1
LMO3-228ENST00000541846 JMJD4Q9H9V9 463 aa14.45□□□□□ -0.1
LMO3-228ENST00000541846 GJB4Q9NTQ9 266 aa14.45□□□□□ -0.1
LMO3-228ENST00000541846 TMOD4Q9NZQ9 345 aa14.45□□□□□ -0.1
LMO3-228ENST00000541846 MYH15Q9Y2K3 1946 aa14.45□□□□□ -0.1
LMO3-228ENST00000541846 COL11A1P12107 1806 aaPredicted RBP14.44□□□□□ -0.1
LMO3-228ENST00000541846 VPS37CA5D8V6 355 aaPredicted RBP14.44□□□□□ -0.1
LMO3-228ENST00000541846 PLA2G6O60733 806 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 CETPP11597 493 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 SCG2P13521 617 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 HSPA6P17066 643 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 HOXA7P31268 230 aaPredicted RBP14.44□□□□□ -0.1
LMO3-228ENST00000541846 NUCB2P80303 420 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 PFKFB3Q16875 520 aaPredicted RBP14.44□□□□□ -0.1
LMO3-228ENST00000541846 OTUD7BQ6GQQ9 843 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 GPAT2Q6NUI2 795 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 FAM160B2Q86V87 743 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 HOMER1Q86YM7 354 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 MTMR8Q96EF0 704 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 C8orf76Q96K31 380 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 RPAP3Q9H6T3 665 aaPredicted RBP14.44□□□□□ -0.1
LMO3-228ENST00000541846 FBXO28Q9NVF7 368 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 FEM1BQ9UK73 627 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 PRR12Q9ULL5 1215 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 MTMR6Q9Y217 621 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 ZDHHC9Q9Y397 364 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 SMCHD1A6NHR9 2005 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 CEP350Q5VT06 3117 aa14.44□□□□□ -0.1
LMO3-228ENST00000541846 BRD1O95696 1058 aa14.43□□□□□ -0.1
LMO3-228ENST00000541846 INHBEP58166 350 aa14.43□□□□□ -0.1
LMO3-228ENST00000541846 GUCY1B3Q02153 619 aa14.43□□□□□ -0.1
LMO3-228ENST00000541846 KRT40Q6A162 431 aa14.43□□□□□ -0.1
LMO3-228ENST00000541846 FBXO18Q8NFZ0 1043 aa14.43□□□□□ -0.1
LMO3-228ENST00000541846 CHURC1Q8WUH1 139 aa14.43□□□□□ -0.1
LMO3-228ENST00000541846 BRI3BPQ8WY22 251 aa14.43□□□□□ -0.1
LMO3-228ENST00000541846 GPKOWQ92917 476 aaPredicted RBP eCLIP14.43□□□□□ -0.1
LMO3-228ENST00000541846 SHISA4Q96DD7 197 aa14.43□□□□□ -0.1
LMO3-228ENST00000541846 TANGO6Q9C0B7 1094 aa14.43□□□□□ -0.1
LMO3-228ENST00000541846 SEC63Q9UGP8 760 aaKnown RBP14.43□□□□□ -0.1
LMO3-228ENST00000541846 WDR33Q9C0J8 1336 aaKnown RBP14.42□□□□□ -0.1
LMO3-228ENST00000541846 PNMA6FA0A0J9YX94 578 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 MANSC4A6NHS7 340 aaPredicted RBP14.42□□□□□ -0.1
LMO3-228ENST00000541846 H3BQV1 296 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 PDIA4P13667 645 aaKnown RBP14.42□□□□□ -0.1
LMO3-228ENST00000541846 TM4SF4P48230 202 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 SNAP25P60880 206 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 QRICH1Q2TAL8 776 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 IFFO2Q5TF58 517 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 FOXD4L5Q5VV16 416 aaPredicted RBP14.42□□□□□ -0.1
LMO3-228ENST00000541846 WWC2Q6AWC2 1192 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 CYP4F22Q6NT55 531 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 GADL1Q6ZQY3 521 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 CATSPERGQ6ZRH7 1159 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 FOXD4L4Q8WXT5 416 aaPredicted RBP14.42□□□□□ -0.1
LMO3-228ENST00000541846 KIFC2Q96AC6 838 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 CAPNS2Q96L46 248 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 PTPN18Q99952 460 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 VPS54Q9P1Q0 977 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 SLC45A1Q9Y2W3 748 aa14.42□□□□□ -0.1
LMO3-228ENST00000541846 CCL15-CCL14A0A0B4J2E2 113 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 USP17L15C9J2P7 530 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 USP17L13C9JLJ4 530 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 USP17L11C9JVI0 530 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 USP17L18D6R9N7 530 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 USP17L22D6RA61 530 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms