RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PDCD2Q16342 344 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-204ENST00000541819 GPIHBP1Q8IV16 184 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 DCPSQ96C86 337 aaKnown RBP11.78□□□□□ -0.52
GABRB3-204ENST00000541819 RABEP2Q9H5N1 569 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 C19orf44Q9H6X5 657 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 NRBP2Q9NSY0 501 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 TRPM2O94759 1503 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 TOP2BQ02880 1626 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 DNAJC8O75937 253 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-204ENST00000541819 TRIM37O94972 964 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 SLF1Q9BQI6 1058 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 TEKT3Q9BXF9 490 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 HOMER3Q9NSC5 361 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 NESP48681 1621 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 BAG2O95816 211 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 ALAS1P13196 640 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 DMP1Q13316 513 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-204ENST00000541819 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.78□□□□□ -0.52
GABRB3-204ENST00000541819 METTL23Q86XA0 190 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 NCAPG2Q86XI2 1143 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 BLZF1Q9H2G9 400 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 FAM207AQ9NSI2 230 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-204ENST00000541819 PCDHB15Q9Y5E8 787 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 ORC6Q9Y5N6 252 aa11.78□□□□□ -0.52
GABRB3-204ENST00000541819 ZNF202O95125 648 aa11.77□□□□□ -0.52
GABRB3-204ENST00000541819 SORBS3O60504 671 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 ABCB4P21439 1286 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 PIK3CAP42336 1068 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 STX1BP61266 288 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 TIMM10P62072 90 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 ASPHQ12797 758 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 TTC1Q99614 292 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 BZW2Q9Y6E2 419 aaKnown RBP11.77□□□□□ -0.53
GABRB3-204ENST00000541819 ATF2P15336 505 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 BAG6P46379 1132 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 MYOCDQ8IZQ8 938 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 NLRC4Q9NPP4 1024 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 SYNJ2BP-COX16A0A087WUM0 186 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 TAF5LO75529 589 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 TFAP4Q01664 338 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 BFSP1Q12934 665 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 COX16Q9P0S2 106 aa11.77□□□□□ -0.53
GABRB3-204ENST00000541819 KRIT1O00522 736 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 THAP12O43422 761 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 GPC4O75487 556 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 POLGP54098 1239 aaPredicted RBP11.76□□□□□ -0.53
GABRB3-204ENST00000541819 ANKRD35Q8N283 1001 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 ATP6V1E2Q96A05 226 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 LMCD1Q9NZU5 365 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 ZFYVE9O95405 1425 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 PPARDQ03181 441 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 C2CD5Q86YS7 1000 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 PLEKHM2Q8IWE5 1019 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 NLRP7Q8WX94 980 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 CCDC51Q96ER9 411 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 NCOA5Q9HCD5 579 aaKnown RBP11.76□□□□□ -0.53
GABRB3-204ENST00000541819 NFE2L3Q9Y4A8 694 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 RNF8O76064 485 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 ZNF75DP51815 510 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 MAP7D3Q8IWC1 876 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 CXorf38Q8TB03 319 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 USP26Q9BXU7 913 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 DDX41Q9UJV9 622 aaKnown RBP11.76□□□□□ -0.53
GABRB3-204ENST00000541819 ABCC1P33527 1531 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 HOXC9P31274 260 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 SF3A3Q12874 501 aaKnown RBP eCLIP11.76□□□□□ -0.53
GABRB3-204ENST00000541819 KRT40Q6A162 431 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 RAPH1Q70E73 1250 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 MYL10Q9BUA6 226 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 UBN1Q9NPG3 1134 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 NUB1Q9Y5A7 615 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 KDM5BQ9UGL1 1544 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 H7C0C1 242 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 GNGT2O14610 69 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 NVLO15381 856 aaKnown RBP11.76□□□□□ -0.53
GABRB3-204ENST00000541819 GCP02774 474 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 ATP5OP48047 213 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 ANKRD20A4Q4UJ75 823 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 ANKRD20A8PQ5CZ79 823 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 ANKRD20A2Q5SQ80 823 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 ANKRD20A1Q5TYW2 823 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 TRIM58Q8NG06 486 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.76□□□□□ -0.53
GABRB3-204ENST00000541819 CCDC124Q96CT7 223 aaKnown RBP11.76□□□□□ -0.53
GABRB3-204ENST00000541819 RUNDC3BQ96NL0 473 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 MRPL46Q9H2W6 279 aaKnown RBP11.76□□□□□ -0.53
GABRB3-204ENST00000541819 BAIAP2L1Q9UHR4 511 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 MAD1L1Q9Y6D9 718 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 AOX1Q06278 1338 aa11.76□□□□□ -0.53
GABRB3-204ENST00000541819 EIF3CLB5ME19 914 aaKnown RBP11.75□□□□□ -0.53
GABRB3-204ENST00000541819 KCNK3O14649 394 aa11.75□□□□□ -0.53
GABRB3-204ENST00000541819 SERPINB6P35237 376 aa11.75□□□□□ -0.53
GABRB3-204ENST00000541819 KRT26Q7Z3Y9 468 aa11.75□□□□□ -0.53
GABRB3-204ENST00000541819 EIF3CQ99613 913 aaKnown RBP11.75□□□□□ -0.53
GABRB3-204ENST00000541819 SLC12A6Q9UHW9 1150 aa11.75□□□□□ -0.53
GABRB3-204ENST00000541819 TEX14Q8IWB6 1497 aa11.75□□□□□ -0.53
GABRB3-204ENST00000541819 PRXQ9BXM0 1461 aa11.75□□□□□ -0.53
GABRB3-204ENST00000541819 GOLGA8KD6RF30 607 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 1380.7 ms