RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 RECQLP46063 649 aaPredicted RBP6.95□□□□□ -1.3
DMD-228ENST00000541735 TFAMQ00059 246 aaKnown RBP6.95□□□□□ -1.3
DMD-228ENST00000541735 SLFN5Q08AF3 891 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 PARP10Q53GL7 1025 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 ALKBH2Q6NS38 261 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 STMN4Q9H169 189 aaPredicted RBP6.95□□□□□ -1.3
DMD-228ENST00000541735 SLC38A10Q9HBR0 1119 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 PLCB1Q9NQ66 1216 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 NRBP2Q9NSY0 501 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 SMCO2A6NFE2 343 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 KRT86O43790 486 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 ARID4AP29374 1257 aaPredicted RBP6.95□□□□□ -1.3
DMD-228ENST00000541735 ZNF157P51786 506 aaPredicted RBP6.95□□□□□ -1.3
DMD-228ENST00000541735 SETDB1Q15047 1291 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 PLA2G4DQ86XP0 818 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 SPATA5Q8NB90 893 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 GPKOWQ92917 476 aaPredicted RBP eCLIP6.95□□□□□ -1.3
DMD-228ENST00000541735 RPGRIP1Q96KN7 1286 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 CCDC94Q9BW85 323 aaPredicted RBP6.95□□□□□ -1.3
DMD-228ENST00000541735 BAG5Q9UL15 447 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 EIF4E1BA6NMX2 242 aaKnown RBP6.94□□□□□ -1.3
DMD-228ENST00000541735 H7C0C1 242 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 ATP5OP48047 213 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 KIF11P52732 1056 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 RPS8P62241 208 aaKnown RBP6.94□□□□□ -1.3
DMD-228ENST00000541735 FBXO11Q86XK2 927 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 UHMK1Q8TAS1 419 aaKnown RBP6.94□□□□□ -1.3
DMD-228ENST00000541735 OTUD5Q96G74 571 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 TTC14Q96N46 770 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 EFCC1Q9HA90 598 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 SLC12A6Q9UHW9 1150 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.94□□□□□ -1.3
DMD-228ENST00000541735 POLR2DO15514 142 aaKnown RBP6.94□□□□□ -1.3
DMD-228ENST00000541735 MCM4P33991 863 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 ANO1Q5XXA6 986 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 LCA5Q86VQ0 697 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 GPBP1Q86WP2 473 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 VMP1Q96GC9 406 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 KRT12Q99456 494 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 PSTPIP2Q9H939 334 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 CAPN10Q9HC96 672 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 SARS2Q9NP81 518 aaKnown RBP6.94□□□□□ -1.3
DMD-228ENST00000541735 DACT1Q9NYF0 836 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 SCAF8Q9UPN6 1271 aaKnown RBP6.94□□□□□ -1.3
DMD-228ENST00000541735 SDSP20132 328 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 MNAT1P51948 309 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 CACNB3P54284 484 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 DYNLT1P63172 113 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 NEDD9Q14511 834 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 HHATQ5VTY9 493 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 CC2D1AQ6P1N0 951 aaPredicted RBP6.94□□□□□ -1.3
DMD-228ENST00000541735 UBL4BQ8N7F7 174 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 IQUBQ8NA54 791 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 PDZD8Q8NEN9 1154 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 FLAD1Q8NFF5 587 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 DDX27Q96GQ7 796 aaKnown RBP6.94□□□□□ -1.3
DMD-228ENST00000541735 SLC13A4Q9UKG4 626 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 IGF1RP08069 1367 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 ZNF532Q9HCE3 1301 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 GOLGA8SH3BPF8 625 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 COBLO75128 1261 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 NPR1P16066 1061 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 CSGALNACT2Q8N6G5 542 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 ANKRD42Q8N9B4 389 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 PPP1R12CQ9BZL4 782 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 LGR6Q9HBX8 967 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 LUC7L2Q9Y383 392 aaKnown RBP6.94□□□□□ -1.3
DMD-228ENST00000541735 WDR64B1ANS9 1081 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 PFDN6O15212 129 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 MX2P20592 715 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 GSDMDP57764 484 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 PPM1KQ8N3J5 372 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 SH3KBP1Q96B97 665 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 EEF2KMTQ96G04 330 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 RABGAP1Q9Y3P9 1069 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 PCDHB4Q9Y5E5 795 aa6.94□□□□□ -1.3
DMD-228ENST00000541735 GPAA1O43292 621 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 ASMTLO95671 621 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 CD58P19256 250 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 ZAP70P43403 619 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 KRT83P78385 493 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 PRPSAP1Q14558 356 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 ALDH1L2Q3SY69 923 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 MFSD4BQ5TF39 518 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 SEPT12Q8IYM1 358 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 PCIF1Q9H4Z3 704 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 MRPL11Q9Y3B7 192 aaKnown RBP6.93□□□□□ -1.3
DMD-228ENST00000541735 CEP104O60308 925 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 SERPINB2P05120 415 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 NUMBP49757 651 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 FYB2Q5VWT5 728 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 CNNM4Q6P4Q7 775 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 GBP6Q6ZN66 633 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 OTULINQ96BN8 352 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 SPDL1Q96EA4 605 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 IFNKQ9P0W0 207 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 SUCLA2Q9P2R7 463 aaPredicted RBP6.93□□□□□ -1.3
DMD-228ENST00000541735 UTP11Q9Y3A2 253 aaKnown RBP6.93□□□□□ -1.3
DMD-228ENST00000541735 DENND4BO75064 1496 aaPredicted RBP6.93□□□□□ -1.3
DMD-228ENST00000541735 MRC2Q9UBG0 1479 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms