RNA–Protein interactions for RNA: ENST00000541669.5

LDHC-207, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-207ENST00000541669 APLP1P51693 650 aa11.29□□□□□ -0.6
LDHC-207ENST00000541669 GTF2A2P52657 109 aa11.29□□□□□ -0.6
LDHC-207ENST00000541669 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
LDHC-207ENST00000541669 TTBK2Q6IQ55 1244 aa11.29□□□□□ -0.6
LDHC-207ENST00000541669 FASTKD5Q7L8L6 764 aaKnown RBP11.29□□□□□ -0.6
LDHC-207ENST00000541669 FAM160B2Q86V87 743 aa11.29□□□□□ -0.6
LDHC-207ENST00000541669 CCDC82Q8N4S0 544 aa11.29□□□□□ -0.6
LDHC-207ENST00000541669 CHURC1Q8WUH1 139 aa11.29□□□□□ -0.6
LDHC-207ENST00000541669 PHKBQ93100 1093 aa11.29□□□□□ -0.6
LDHC-207ENST00000541669 SLC26A6Q9BXS9 759 aa11.29□□□□□ -0.6
LDHC-207ENST00000541669 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
LDHC-207ENST00000541669 RPAP3Q9H6T3 665 aaPredicted RBP11.29□□□□□ -0.6
LDHC-207ENST00000541669 RIOX1Q9H6W3 641 aa11.29□□□□□ -0.6
LDHC-207ENST00000541669 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
LDHC-207ENST00000541669 RBM27Q9P2N5 1060 aaKnown RBP11.29□□□□□ -0.6
LDHC-207ENST00000541669 ZNFX1Q9P2E3 1918 aaKnown RBP11.28□□□□□ -0.6
LDHC-207ENST00000541669 PRPF3O43395 683 aaKnown RBP11.28□□□□□ -0.6
LDHC-207ENST00000541669 CYTH3O43739 400 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 GJB2P29033 226 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 IKQ13123 557 aaPredicted RBP11.28□□□□□ -0.6
LDHC-207ENST00000541669 SLC35G1Q2M3R5 365 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 GADL1Q6ZQY3 521 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 SPRYD3Q8NCJ5 442 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 UBA5Q9GZZ9 404 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 CPVLQ9H3G5 476 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 CREBZFQ9NS37 354 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 USP17L15C9J2P7 530 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 USP17L13C9JLJ4 530 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 USP17L11C9JVI0 530 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 USP17L18D6R9N7 530 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 USP17L22D6RA61 530 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 USP17L17D6RBQ6 530 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 USP17L19D6RCP7 530 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 USP17L20D6RJB6 530 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 SLC10A3P09131 477 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 CETPP11597 493 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 SLC16A2P36021 539 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 AKAP17AQ02040 695 aaKnown RBP11.28□□□□□ -0.6
LDHC-207ENST00000541669 USP17L24Q0WX57 530 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 MOGSQ13724 837 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 SYDE2Q5VT97 1194 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 ADGRF4Q8IZF3 695 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 CCDC102AQ96A19 550 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 DDX11Q96FC9 970 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 MS4A4AQ96JQ5 239 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 ORC3Q9UBD5 711 aaPredicted RBP11.28□□□□□ -0.6
LDHC-207ENST00000541669 AGTPBP1Q9UPW5 1226 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 KIF3AQ9Y496 699 aa11.28□□□□□ -0.6
LDHC-207ENST00000541669 PPFIA3O75145 1194 aa11.27□□□□□ -0.61
LDHC-207ENST00000541669 FLOT1O75955 427 aa11.27□□□□□ -0.61
LDHC-207ENST00000541669 DEXIO95424 95 aa11.27□□□□□ -0.61
LDHC-207ENST00000541669 FDPSP14324 419 aaKnown RBP11.27□□□□□ -0.61
LDHC-207ENST00000541669 HOXA7P31268 230 aaPredicted RBP11.27□□□□□ -0.61
LDHC-207ENST00000541669 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
LDHC-207ENST00000541669 TREML2Q5T2D2 321 aa11.27□□□□□ -0.61
LDHC-207ENST00000541669 CATSPERGQ6ZRH7 1159 aa11.27□□□□□ -0.61
LDHC-207ENST00000541669 FAM184AQ8NB25 1140 aa11.27□□□□□ -0.61
LDHC-207ENST00000541669 WASF1Q92558 559 aa11.27□□□□□ -0.61
LDHC-207ENST00000541669 MTMR8Q96EF0 704 aa11.27□□□□□ -0.61
LDHC-207ENST00000541669 RRP36Q96EU6 259 aaKnown RBP11.27□□□□□ -0.61
LDHC-207ENST00000541669 SLF1Q9BQI6 1058 aa11.27□□□□□ -0.61
LDHC-207ENST00000541669 JMJD4Q9H9V9 463 aa11.27□□□□□ -0.61
LDHC-207ENST00000541669 CWC22Q9HCG8 908 aaKnown RBP11.27□□□□□ -0.61
LDHC-207ENST00000541669 SEC63Q9UGP8 760 aaKnown RBP11.27□□□□□ -0.61
LDHC-207ENST00000541669 PRR12Q9ULL5 1215 aa11.27□□□□□ -0.61
LDHC-207ENST00000541669 V9GY48 417 aaPredicted RBP11.27□□□□□ -0.61
LDHC-207ENST00000541669 CCL15-CCL14A0A0B4J2E2 113 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 DTNBO60941 627 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 PABPC4Q13310 644 aaKnown RBP eCLIP11.26□□□□□ -0.61
LDHC-207ENST00000541669 CCL15Q16663 113 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 PRPF38AQ8NAV1 312 aaKnown RBP11.26□□□□□ -0.61
LDHC-207ENST00000541669 KIFC2Q96AC6 838 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 VAT1LQ9HCJ6 419 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 PPP1R9AQ9ULJ8 1098 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 MYPNQ86TC9 1320 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 MANSC4A6NHS7 340 aaPredicted RBP11.26□□□□□ -0.61
LDHC-207ENST00000541669 RASSF10A6NK89 507 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 FAM155AB1AL88 458 aaPredicted RBP11.26□□□□□ -0.61
LDHC-207ENST00000541669 ZBTB5O15062 677 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 COG2Q14746 738 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 PKN1Q16512 942 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 PFKFB3Q16875 520 aaPredicted RBP11.26□□□□□ -0.61
LDHC-207ENST00000541669 HOMER1Q86YM7 354 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 PIGSQ96S52 555 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 RANBP17Q9H2T7 1088 aaKnown RBP11.26□□□□□ -0.61
LDHC-207ENST00000541669 SLC45A1Q9Y2W3 748 aa11.26□□□□□ -0.61
LDHC-207ENST00000541669 DOCK3Q8IZD9 2030 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 PNMA6FA0A0J9YX94 578 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 hCG_1642624A0A1W2PR95 340 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 TESPA1A2RU30 521 aaPredicted RBP11.25□□□□□ -0.61
LDHC-207ENST00000541669 FDX1P10109 184 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 SCG2P13521 617 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 PDCP20941 246 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 CDC37Q16543 378 aaPredicted RBP11.25□□□□□ -0.61
LDHC-207ENST00000541669 GPAT2Q6NUI2 795 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 PIBF1Q8WXW3 757 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 BRI3BPQ8WY22 251 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 HOXC10Q9NYD6 342 aa11.25□□□□□ -0.61
LDHC-207ENST00000541669 MYH7BA7E2Y1 1941 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms