RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 DNAJC8O75937 253 aaPredicted RBP6.64□□□□□ -1.35
DDB1-219ENST00000541513 ATE1O95260 518 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 APBA3O96018 575 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 SETSIPP0DME0 302 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 BPIP17213 487 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 LMNB1P20700 586 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 LPOP22079 712 aaPredicted RBP6.64□□□□□ -1.35
DDB1-219ENST00000541513 L1CAMP32004 1257 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 CYP2C19P33261 490 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 ECE1P42892 770 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 PDE1CQ14123 709 aaPredicted RBP6.64□□□□□ -1.35
DDB1-219ENST00000541513 SLC9A5Q14940 896 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 TRIM61Q5EBN2 209 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 PKN3Q6P5Z2 889 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 C1orf228Q6PIY5 440 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 C16orf54Q6UWD8 224 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 TPTE2Q6XPS3 522 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 DTHD1Q6ZMT9 781 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 GK5Q6ZS86 529 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 EPM2AIP1Q7L775 607 aaPredicted RBP6.64□□□□□ -1.35
DDB1-219ENST00000541513 FAM43AQ8N2R8 423 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 C1orf127Q8N9H9 656 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 ZNF784Q8NCA9 323 aaPredicted RBP6.64□□□□□ -1.35
DDB1-219ENST00000541513 PGBD4Q96DM1 585 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 CDK5RAP3Q96JB5 506 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 AIFM3Q96NN9 605 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 NECAB3Q96P71 396 aaPredicted RBP6.64□□□□□ -1.35
DDB1-219ENST00000541513 FHDC1Q9C0D6 1143 aaPredicted RBP6.64□□□□□ -1.35
DDB1-219ENST00000541513 LRRC27Q9C0I9 530 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.64□□□□□ -1.352e-6■■■□□ 15.1
DDB1-219ENST00000541513 TMPRSS4Q9NRS4 437 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 CWC25Q9NXE8 425 aaPredicted RBP6.64□□□□□ -1.35
DDB1-219ENST00000541513 CABP1Q9NZU7 370 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 DACH1Q9UI36 760 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 APOBEC2Q9Y235 224 aaKnown RBP6.64□□□□□ -1.35
DDB1-219ENST00000541513 DHX57Q6P158 1386 aaKnown RBP6.64□□□□□ -1.35
DDB1-219ENST00000541513 ANKRD30BQ9BXX2 1392 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 SLIT1O75093 1534 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 CCDC144AA2RUR9 1427 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 ENC1O14682 589 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 ZEB2O60315 1214 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 GUCY2CP25092 1073 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 POLD1P28340 1107 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 ARSDP51689 593 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 IDI1Q13907 227 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 TOMM20Q15388 145 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 WDR45BQ5MNZ6 344 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 PEAR1Q5VY43 1037 aaPredicted RBP6.63□□□□□ -1.35
DDB1-219ENST00000541513 TSHZ3Q63HK5 1081 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 VASH1Q7L8A9 365 aaPredicted RBP6.63□□□□□ -1.35
DDB1-219ENST00000541513 STRCQ7RTU9 1775 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 CLIP3Q96DZ5 547 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 TNIP3Q96KP6 325 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 TSPAN18Q96SJ8 248 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 TTC1Q99614 292 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 RIC8AQ9NPQ8 531 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 RAB6BQ9NRW1 208 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 ARHGAP23Q9P227 1491 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 IFT172Q9UG01 1749 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 DMTF1Q9Y222 760 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 GIT1Q9Y2X7 761 aa6.63□□□□□ -1.35
DDB1-219ENST00000541513 PPLO60437 1756 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 FRMPD2Q68DX3 1309 aaPredicted RBP6.62□□□□□ -1.35
DDB1-219ENST00000541513 hCG_1984214I3L0E3 225 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 KHNYNO15037 678 aaKnown RBP6.62□□□□□ -1.35
DDB1-219ENST00000541513 DHX16O60231 1041 aaKnown RBP6.62□□□□□ -1.35
DDB1-219ENST00000541513 SNX2O60749 519 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 HSP90AB1P08238 724 aaKnown RBP6.62□□□□□ -1.35
DDB1-219ENST00000541513 EDN3P14138 238 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 INPP5BP32019 993 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 IDH3AP50213 366 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 AK2P54819 239 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 SH3BP2P78314 561 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 KRT85P78386 507 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 SEPT7Q16181 437 aaKnown RBP6.62□□□□□ -1.35
DDB1-219ENST00000541513 TJAP1Q5JTD0 557 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 XRRA1Q6P2D8 792 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 RUFY4Q6ZNE9 571 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 SAPCD2Q86UD0 394 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 ZSCAN30Q86W11 494 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 FAM186BQ8IYM0 893 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 CBARPQ8N350 705 aaPredicted RBP6.62□□□□□ -1.35
DDB1-219ENST00000541513 CPA6Q8N4T0 437 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 GIMAP8Q8ND71 665 aaPredicted RBP6.62□□□□□ -1.35
DDB1-219ENST00000541513 C7orf43Q8WVR3 580 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 CNKSR1Q969H4 720 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 NUP88Q99567 741 aaPredicted RBP6.62□□□□□ -1.35
DDB1-219ENST00000541513 MIR1-1HGQ9H1L0 117 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 IFT22Q9H7X7 185 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 PTPN22Q9Y2R2 807 aa6.62□□□□□ -1.35
DDB1-219ENST00000541513 RTCBQ9Y3I0 505 aaKnown RBP6.62□□□□□ -1.35
DDB1-219ENST00000541513 GPC6Q9Y625 555 aaPredicted RBP6.62□□□□□ -1.35
DDB1-219ENST00000541513 SPATA31E1Q6ZUB1 1445 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 WASHC2AQ641Q2 1341 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 TRBV23-1A0A0A0MS06 115 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 FZD9O00144 591 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 TGFB3P10600 412 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 SLC5A1P13866 664 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 TNFAIP3P21580 790 aa6.61□□□□□ -1.35
DDB1-219ENST00000541513 ALDH5A1P51649 535 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms