RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ORC3Q9UBD5 711 aaPredicted RBP11.83□□□□□ -0.52
CHFR-219ENST00000541341 DOCK1Q14185 1865 aa11.83□□□□□ -0.52
CHFR-219ENST00000541341 PTPDC1A2A3K4 754 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 A6NNZ2 444 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 BTBD19C9JJ37 291 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 IRF6O14896 467 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 SPTLC2O15270 562 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 ZRANB2O95218 330 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHFR-219ENST00000541341 UQCRFS1P1P0C7P4 283 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 TOP1P11387 765 aaKnown RBP11.82□□□□□ -0.52
CHFR-219ENST00000541341 INPP5BP32019 993 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 ADD1P35611 737 aaKnown RBP11.82□□□□□ -0.52
CHFR-219ENST00000541341 PHKA1P46020 1223 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 TUBB8Q3ZCM7 444 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 TPRNQ4KMQ1 711 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 HABP4Q5JVS0 413 aaKnown RBP11.82□□□□□ -0.52
CHFR-219ENST00000541341 LEKR1Q6ZMV7 388 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 C11orf57Q6ZUT1 292 aaPredicted RBP11.82□□□□□ -0.52
CHFR-219ENST00000541341 TMC6Q7Z403 805 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
CHFR-219ENST00000541341 WASF1Q92558 559 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 GOLGA1Q92805 767 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 ARMC5Q96C12 935 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 FAM227BQ96M60 508 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 TMOD2Q9NZR1 351 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.82□□□□□ -0.52
CHFR-219ENST00000541341 CPA4Q9UI42 421 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 CDK5RAP2Q96SN8 1893 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 DOCK3Q8IZD9 2030 aa11.82□□□□□ -0.52
CHFR-219ENST00000541341 FOCADQ5VW36 1801 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 A0A0D9SFI3 127 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 FAM237AA0A1B0GTK4 181 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 SPDYE5A6NIY4 337 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 UNCXA6NJT0 531 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 SERPINC1P01008 464 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 TNNT3P45378 269 aaPredicted RBP11.81□□□□□ -0.52
CHFR-219ENST00000541341 CLCN6P51797 869 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 UBASH3AP57075 661 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 EXOSC10Q01780 885 aaKnown RBP11.81□□□□□ -0.52
CHFR-219ENST00000541341 DIXDC1Q155Q3 683 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 E4F1Q66K89 784 aaPredicted RBP11.81□□□□□ -0.52
CHFR-219ENST00000541341 APOBEC3HQ6NTF7 200 aaKnown RBP11.81□□□□□ -0.52
CHFR-219ENST00000541341 SYT10Q6XYQ8 523 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 IQUBQ8NA54 791 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 ZNF333Q96JL9 665 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 C8orf76Q96K31 380 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 BOLA2Q9H3K6 86 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 GNL3LQ9NVN8 582 aaKnown RBP11.81□□□□□ -0.52
CHFR-219ENST00000541341 MYO1AQ9UBC5 1043 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 FHOD1Q9Y613 1164 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 SALL1Q9NSC2 1324 aa11.81□□□□□ -0.52
CHFR-219ENST00000541341 CPLX1O14810 134 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 IGSF3O75054 1194 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 SLURP2P0DP57 97 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 CTGFP29279 349 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 MCAMP43121 646 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 FANCCQ00597 558 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 SCRN1Q12765 414 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 STK3Q13188 491 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 TTC39AQ5SRH9 613 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 GORABQ5T7V8 394 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 MLKLQ8NB16 471 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 LINC00301Q8NCQ3 95 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 TBC1D22AQ8WUA7 517 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 CCDC51Q96ER9 411 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 ZDHHC15Q96MV8 337 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 CTAGE1Q96RT6 745 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 LARP6Q9BRS8 491 aaKnown RBP11.8□□□□□ -0.52
CHFR-219ENST00000541341 XPO4Q9C0E2 1151 aaKnown RBP11.8□□□□□ -0.52
CHFR-219ENST00000541341 RASSF4Q9H2L5 321 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 TMX1Q9H3N1 280 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 TRMT1Q9NXH9 659 aaKnown RBP11.8□□□□□ -0.52
CHFR-219ENST00000541341 IFNKQ9P0W0 207 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 TUBE1Q9UJT0 475 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 DENND2AQ9ULE3 1009 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 PCDHA7Q9UN72 937 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 LAMA4Q16363 1823 aa11.8□□□□□ -0.52
CHFR-219ENST00000541341 TADA3O75528 432 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 URI1O94763 535 aaPredicted RBP11.79□□□□□ -0.52
CHFR-219ENST00000541341 ZNF202O95125 648 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 CETPP11597 493 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 LACTBP83111 547 aaPredicted RBP11.79□□□□□ -0.52
CHFR-219ENST00000541341 NFIAQ12857 509 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 RASGRF1Q13972 1273 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 TRIM29Q14134 588 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 KIF22Q14807 665 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 MTFR1Q15390 333 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 IMMTQ16891 758 aaKnown RBP11.79□□□□□ -0.52
CHFR-219ENST00000541341 ERCC6LQ2NKX8 1250 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 HSP90B2PQ58FF3 399 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 HDXQ7Z353 690 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 NBPF11Q86T75 865 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 ERO1BQ86YB8 467 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 ZFPM1Q8IX07 1006 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 USP28Q96RU2 1077 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 PYM1Q9BRP8 204 aaKnown RBP11.79□□□□□ -0.52
CHFR-219ENST00000541341 ALPK3Q96L96 1907 aa11.79□□□□□ -0.52
CHFR-219ENST00000541341 TLR2O60603 784 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 CUTAO60888 179 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 CYP21A2P08686 494 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms