RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 STK3Q13188 491 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 MTMR2Q13614 643 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 COL9A3Q14050 684 aaPredicted RBP7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 TOB2Q14106 344 aaPredicted RBP7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 RASA3Q14644 834 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 WTAPQ15007 396 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 CCDC178Q5BJE1 867 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 USP48Q86UV5 1035 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 FAM83AQ86UY5 434 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 TMTC2Q8N394 836 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 SLC44A5Q8NCS7 719 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 SMC1BQ8NDV3 1235 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 CHMP4CQ96CF2 233 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 ZSCAN10Q96SZ4 725 aaPredicted RBP7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 TMEM39BQ9GZU3 492 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 EHD4Q9H223 541 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 SLKQ9H2G2 1235 aaPredicted RBP7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 GGA3Q9NZ52 723 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 ANGEL1Q9UNK9 670 aaKnown RBP7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 SCAF8Q9UPN6 1271 aaKnown RBP7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 SLC12A7Q9Y666 1083 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 TACC3Q9Y6A5 838 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 WASF2Q9Y6W5 498 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 ROBO3Q96MS0 1386 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 KLF18A0A0U1RQI7 1052 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 ADM5C9JUS6 153 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 SH2B2O14492 632 aaPredicted RBP7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 RASA1P20936 1047 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 LIFRP42702 1097 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 CCT2P78371 535 aaKnown RBP7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 ME3Q16798 604 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 IFIT1BQ5T764 474 aaKnown RBP7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 PTCRAQ6ISU1 281 aaPredicted RBP7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 CDC37L1Q7L3B6 337 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 SH3BP5LQ7L8J4 393 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 KRT26Q7Z3Y9 468 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 APOBEC3FQ8IUX4 373 aaKnown RBP7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 NECAB1Q8N987 351 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 IGDCC4Q8TDY8 1250 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 MTA3Q9BTC8 594 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 GLIS2Q9BZE0 524 aaPredicted RBP7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 DEFB129Q9H1M3 183 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 TPCN1Q9ULQ1 816 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 TNKSO95271 1327 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 PITPNM2Q9BZ72 1349 aa7.77□□□□□ -1.17
CLTCL1-206ENST00000540896 CNTNAP1P78357 1384 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 MOXD2PA6NHM9 499 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 FAM196BA6NMK8 535 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 GOLGA8BA8MQT2 603 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 CPLX1O14810 134 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 SIAH2O43255 324 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 ZBTB43O43298 467 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 DHX16O60231 1041 aaKnown RBP7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 NMT2O60551 498 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 ATP2B2Q01814 1243 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 KCNH2Q12809 1159 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 FSTL1Q12841 308 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 CERKLQ49MI3 558 aaPredicted RBP7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 DLK2Q6UY11 383 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 MIGA2Q7L4E1 593 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 CATIPQ7Z7H3 387 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 RAB11FIP4Q86YS3 637 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 CCDC83Q8IWF9 413 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 FBXL16Q8N461 479 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 PRR7Q8TB68 274 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 HOOK2Q96ED9 719 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 ZNF274Q96GC6 653 aaPredicted RBP7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 CCDC17Q96LX7 622 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 BEGAINQ9BUH8 593 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 KAT14Q9H8E8 782 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 LY9Q9HBG7 655 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 CABP5Q9NP86 173 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 HERC5Q9UII4 1024 aaKnown RBP7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 BRPF3Q9ULD4 1205 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 STX8Q9UNK0 236 aa7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 POLR2AP24928 1970 aaKnown RBP7.76□□□□□ -1.17
CLTCL1-206ENST00000540896 ECM29Q5VYK3 1845 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 ATRNL1Q5VV63 1379 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 TRAF5O00463 557 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 PFKFB2O60825 505 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 AKR1B1P15121 316 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 NDUFV2P19404 249 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 PDIA3P30101 505 aaKnown RBP7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 SHMT1P34896 483 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 METAP2P50579 478 aaKnown RBP eCLIP7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 GABPAQ06546 454 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 ABCB5Q2M3G0 1257 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 SUPT20HL1Q3ZLR7 823 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 PRAMEF18Q5VWM3 479 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 DCAF15Q66K64 600 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 CPLX2Q6PUV4 134 aaKnown RBP7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 MICU3Q86XE3 530 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 CCDC144CPQ8IYA2 1237 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 ZNF654Q8IZM8 581 aa7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 ENAHQ8N8S7 591 aaPredicted RBP7.75□□□□□ -1.17
CLTCL1-206ENST00000540896 NEDD1Q8NHV4 660 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms