RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 FAM107AO95990 144 aa10.85□□□□□ -0.67
CLDN2-202ENST00000540876 MYL1P05976 194 aa10.85□□□□□ -0.67
CLDN2-202ENST00000540876 ATP4AP20648 1035 aa10.85□□□□□ -0.67
CLDN2-202ENST00000540876 GCLCP48506 637 aaPredicted RBP10.85□□□□□ -0.67
CLDN2-202ENST00000540876 SIK1P57059 783 aa10.85□□□□□ -0.67
CLDN2-202ENST00000540876 AMPD2Q01433 879 aa10.85□□□□□ -0.67
CLDN2-202ENST00000540876 ITPK1Q13572 414 aa10.85□□□□□ -0.67
CLDN2-202ENST00000540876 FAM196AQ6ZSG2 479 aa10.85□□□□□ -0.67
CLDN2-202ENST00000540876 CYFIP2Q96F07 1278 aa10.85□□□□□ -0.67
CLDN2-202ENST00000540876 MAF1Q9H063 256 aa10.85□□□□□ -0.67
CLDN2-202ENST00000540876 C9orf78Q9NZ63 289 aaPredicted RBP10.85□□□□□ -0.67
CLDN2-202ENST00000540876 NEDD4P46934 1319 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 B4DLN1 442 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 H7C1W4 665 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 HMGB1P09429 215 aaKnown RBP10.84□□□□□ -0.67
CLDN2-202ENST00000540876 RBM41Q96IZ5 413 aaKnown RBP10.84□□□□□ -0.67
CLDN2-202ENST00000540876 PALLDQ8WX93 1383 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 A0A1W2PQ27 194 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 A0A1W2PQ64 194 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 A0A1W2PQD8 194 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 KRT14P02533 472 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 MRPS25P82663 173 aaKnown RBP10.84□□□□□ -0.67
CLDN2-202ENST00000540876 XRCC4Q13426 336 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 TRIM42Q8IWZ5 723 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 EHBP1Q8NDI1 1231 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 GORASP1Q9BQQ3 440 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 MMADHCQ9H3L0 296 aaPredicted RBP10.84□□□□□ -0.67
CLDN2-202ENST00000540876 GUCA1BQ9UMX6 200 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 TTF2Q9UNY4 1162 aaKnown RBP10.84□□□□□ -0.67
CLDN2-202ENST00000540876 WNK3Q9BYP7 1800 aa10.84□□□□□ -0.67
CLDN2-202ENST00000540876 HEG1Q9ULI3 1381 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 NBPF26B4DH59 902 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 ZBED6P86452 979 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 PNOCQ13519 176 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 BLMHQ13867 455 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 PDIA6Q15084 440 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 MFSD4BQ5TF39 518 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 NBPF14Q5TI25 921 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 NAA16Q6N069 864 aaPredicted RBP10.83□□□□□ -0.68
CLDN2-202ENST00000540876 RASGRP2Q7LDG7 609 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 NBPF15Q8N660 670 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 AENQ8WTP8 325 aaKnown RBP10.83□□□□□ -0.68
CLDN2-202ENST00000540876 PANX2Q96RD6 677 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 SEC62Q99442 399 aaKnown RBP10.83□□□□□ -0.68
CLDN2-202ENST00000540876 BABAM1Q9NWV8 329 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 ZFATQ9P243 1243 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 GGA2Q9UJY4 613 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 CLIC4Q9Y696 253 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 BRWD3Q6RI45 1802 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 DOT1LQ8TEK3 1739 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 TPD52L2O43399 206 aaKnown RBP10.83□□□□□ -0.68
CLDN2-202ENST00000540876 APBA3O96018 575 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 RBL2Q08999 1139 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 CUL3Q13618 768 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 TMEM132AQ24JP5 1023 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 TSEN2Q8NCE0 465 aaKnown RBP10.83□□□□□ -0.68
CLDN2-202ENST00000540876 RHPN1Q8TCX5 695 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 NOC3LQ8WTT2 800 aaKnown RBP10.83□□□□□ -0.68
CLDN2-202ENST00000540876 YIPF2Q9BWQ6 316 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 OSBPL1AQ9BXW6 950 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 LRRC2Q9BYS8 371 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 NOP53Q9NZM5 478 aaKnown RBP10.83□□□□□ -0.68
CLDN2-202ENST00000540876 MRC1P22897 1456 aa10.83□□□□□ -0.68
CLDN2-202ENST00000540876 PFKFB1P16118 471 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 NR1D1P20393 614 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 MXRA7P84157 204 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 PPP1R15BQ5SWA1 713 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 CCDC70Q6NSX1 233 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 KDM7AQ6ZMT4 941 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 HVCN1Q96D96 273 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 FAM227BQ96M60 508 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 MMTAG2Q9BU76 263 aaKnown RBP10.82□□□□□ -0.68
CLDN2-202ENST00000540876 PIDD1Q9HB75 910 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 LRRC4BQ9NT99 713 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 BACH1O14867 736 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 POLR3DP05423 398 aaPredicted RBP10.82□□□□□ -0.68
CLDN2-202ENST00000540876 EPB41P11171 864 aaKnown RBP10.82□□□□□ -0.68
CLDN2-202ENST00000540876 MDH1P40925 334 aaKnown RBP10.82□□□□□ -0.68
CLDN2-202ENST00000540876 MAGEA10P43363 369 aaPredicted RBP10.82□□□□□ -0.68
CLDN2-202ENST00000540876 C2orf54Q08AI8 447 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 SLMAPQ14BN4 828 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 CWF19L2Q2TBE0 894 aaKnown RBP10.82□□□□□ -0.68
CLDN2-202ENST00000540876 ATL3Q6DD88 541 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 MTHFD1LQ6UB35 978 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 TRMT44Q8IYL2 757 aaKnown RBP10.82□□□□□ -0.68
CLDN2-202ENST00000540876 SYCP3Q8IZU3 236 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 BICD1Q96G01 975 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 NFE2L3Q9Y4A8 694 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 SAR1BQ9Y6B6 198 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 ADAMTS7Q9UKP4 1686 aa10.82□□□□□ -0.68
CLDN2-202ENST00000540876 SPTLC2O15270 562 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 LGR5O75473 907 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 HPDP32754 393 aaPredicted RBP10.81□□□□□ -0.68
CLDN2-202ENST00000540876 PDE4BQ07343 736 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 CCDC178Q5BJE1 867 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 ACBD5Q5T8D3 534 aaPredicted RBP10.81□□□□□ -0.68
CLDN2-202ENST00000540876 TRAPPC11Q7Z392 1133 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 AMIGO3Q86WK7 504 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 GALNT15Q8N3T1 639 aa10.81□□□□□ -0.68
CLDN2-202ENST00000540876 TEKT4Q8WW24 435 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms