RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 SP8Q8IXZ3 490 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 DIS3L2Q8IYB7 885 aaKnown RBP11.67□□□□□ -0.54
LMO3-224ENST00000540848 CCDC24Q8N4L8 307 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 CD209Q9NNX6 404 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 TCP11L1Q9NUJ3 509 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 MKRN1Q9UHC7 482 aaKnown RBP11.67□□□□□ -0.54
LMO3-224ENST00000540848 HOOK1Q9UJC3 728 aaKnown RBP11.67□□□□□ -0.54
LMO3-224ENST00000540848 LTBP1Q14766 1721 aa11.66□□□□□ -0.54
LMO3-224ENST00000540848 FAM205AQ6ZU69 1335 aa11.66□□□□□ -0.54
LMO3-224ENST00000540848 CDC25BP30305 580 aa11.66□□□□□ -0.54
LMO3-224ENST00000540848 NDUFA8P51970 172 aa11.66□□□□□ -0.54
LMO3-224ENST00000540848 AMHR2Q16671 573 aa11.66□□□□□ -0.54
LMO3-224ENST00000540848 RESP18Q5W5W9 173 aa11.66□□□□□ -0.54
LMO3-224ENST00000540848 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.66□□□□□ -0.54
LMO3-224ENST00000540848 TMTC3Q6ZXV5 915 aa11.66□□□□□ -0.54
LMO3-224ENST00000540848 CCDC34Q96HJ3 373 aa11.66□□□□□ -0.54
LMO3-224ENST00000540848 AIFM3Q96NN9 605 aa11.66□□□□□ -0.54
LMO3-224ENST00000540848 AAASQ9NRG9 546 aa11.66□□□□□ -0.54
LMO3-224ENST00000540848 MCM9Q9NXL9 1143 aa11.66□□□□□ -0.54
LMO3-224ENST00000540848 RGPD3A6NKT7 1758 aaPredicted RBP11.65□□□□□ -0.54
LMO3-224ENST00000540848 RGPD4Q7Z3J3 1758 aa11.65□□□□□ -0.54
LMO3-224ENST00000540848 TSPY2A6NKD2 308 aa11.65□□□□□ -0.54
LMO3-224ENST00000540848 TRIM37O94972 964 aa11.65□□□□□ -0.54
LMO3-224ENST00000540848 ZNF202O95125 648 aa11.65□□□□□ -0.54
LMO3-224ENST00000540848 SYKP43405 635 aa11.65□□□□□ -0.54
LMO3-224ENST00000540848 HPSEQ9Y251 543 aa11.65□□□□□ -0.54
LMO3-224ENST00000540848 GPR75-ASB3A0A0A6YYF3 556 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 A0A1B0GVL5 298 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 PFKFB1P16118 471 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 ALDH1B1P30837 517 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 KRT2P35908 639 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 DDR1Q08345 913 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 DHX8Q14562 1220 aaKnown RBP11.64□□□□□ -0.55
LMO3-224ENST00000540848 SPIRE2Q8WWL2 714 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 COA1Q9GZY4 146 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 TMX4Q9H1E5 349 aaPredicted RBP11.64□□□□□ -0.55
LMO3-224ENST00000540848 DNAJC25Q9H1X3 360 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 SH3GLB2Q9NR46 395 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 GJB4Q9NTQ9 266 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 GAKO14976 1311 aa11.64□□□□□ -0.55
LMO3-224ENST00000540848 CYP2D7A0A087X1C5 515 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 BECN2A8MW95 431 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 BTBD18B2RXH4 712 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 ZBTB24O43167 697 aaPredicted RBP11.63□□□□□ -0.55
LMO3-224ENST00000540848 MYO1BO43795 1136 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 NPR1P16066 1061 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 PDE6BP35913 854 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 TRAPPC10P48553 1259 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 TERF1P54274 439 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 TPM4P67936 248 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 IQCB1Q15051 598 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 LUZP1Q86V48 1076 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 PLA2G4DQ86XP0 818 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 TBC1D16Q8TBP0 767 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 LZTS2Q9BRK4 669 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 PHF20Q9BVI0 1012 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 RTFDC1Q9BY42 306 aaPredicted RBP11.63□□□□□ -0.55
LMO3-224ENST00000540848 KAT14Q9H8E8 782 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 FAM13BQ9NYF5 915 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 ATP6V0A2Q9Y487 856 aa11.63□□□□□ -0.55
LMO3-224ENST00000540848 DDX60LQ5H9U9 1706 aaKnown RBP11.63□□□□□ -0.55
LMO3-224ENST00000540848 OFD1O75665 1012 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 CALML3P27482 149 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 GUCY1A2P33402 732 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 PKN1Q16512 942 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 KANK3Q6NY19 840 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 STK11IPQ8N1F8 1099 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 MRFAP1L1Q96HT8 127 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 MKNK2Q9HBH9 465 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 SRPRBQ9Y5M8 271 aaKnown RBP11.62□□□□□ -0.55
LMO3-224ENST00000540848 CNTNAP5Q8WYK1 1306 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 ANKRD31Q8N7Z5 1873 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 QSER1Q2KHR3 1735 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 TRIM75PA6NK02 468 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 SMTNL1A8MU46 457 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 WNT7AO00755 349 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 PRDM1O75626 825 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 WDHD1O75717 1129 aaPredicted RBP11.62□□□□□ -0.55
LMO3-224ENST00000540848 AVPP01185 164 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 JUNDP17535 347 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 NDUFV2P19404 249 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 ZNF75DP51815 510 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 NLRP12P59046 1061 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 GALNT17Q6IS24 598 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 ZNF444Q8N0Y2 327 aaPredicted RBP11.62□□□□□ -0.55
LMO3-224ENST00000540848 CYP4X1Q8N118 509 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 SH3RF3Q8TEJ3 882 aaPredicted RBP11.62□□□□□ -0.55
LMO3-224ENST00000540848 FERMT2Q96AC1 680 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 PYM1Q9BRP8 204 aaKnown RBP11.62□□□□□ -0.55
LMO3-224ENST00000540848 TRIM5Q9C035 493 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 DACH1Q9UI36 760 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 TUBE1Q9UJT0 475 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
LMO3-224ENST00000540848 FOCADQ5VW36 1801 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 CDK5RAP2Q96SN8 1893 aa11.62□□□□□ -0.55
LMO3-224ENST00000540848 NEMFO60524 1076 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 USP17L8P0C7I0 530 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 FDX1P10109 184 aa11.61□□□□□ -0.55
LMO3-224ENST00000540848 SCG2P13521 617 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms