RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 SLC4A10Q6U841 1118 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 TCEAL8Q8IYN2 117 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 AFAP1L2Q8N4X5 818 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 PAF1Q8N7H5 531 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 RIN3Q8TB24 985 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 CAMKK2Q96RR4 588 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 CDH19Q9H159 772 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 TNKS2Q9H2K2 1166 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 GSX1Q9H4S2 264 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-209ENST00000540819 ZNF576Q9H609 170 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 PIDD1Q9HB75 910 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 C1GALT1Q9NS00 363 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 MAP3K20Q9NYL2 800 aaKnown RBP6.84□□□□□ -1.31
PRKDC-209ENST00000540819 SCINQ9Y6U3 715 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 SYNGAP1Q96PV0 1343 aa6.83□□□□□ -1.32
PRKDC-209ENST00000540819 DDAH1O94760 285 aa6.83□□□□□ -1.32
PRKDC-209ENST00000540819 COL6A1P12109 1028 aa6.83□□□□□ -1.32
PRKDC-209ENST00000540819 ITPKAP23677 461 aa6.83□□□□□ -1.32
PRKDC-209ENST00000540819 ZNF165P49910 485 aa6.83□□□□□ -1.32
PRKDC-209ENST00000540819 PIN1Q13526 163 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-209ENST00000540819 SEZ6L2Q6UXD5 910 aa6.83□□□□□ -1.32
PRKDC-209ENST00000540819 NECAB2Q7Z6G3 386 aa6.83□□□□□ -1.32
PRKDC-209ENST00000540819 POU5F2Q8N7G0 328 aa6.83□□□□□ -1.32
PRKDC-209ENST00000540819 RBBP8NLQ8NC74 664 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-209ENST00000540819 BCL7CQ8WUZ0 217 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-209ENST00000540819 MISP3Q96FF7 219 aa6.83□□□□□ -1.32
PRKDC-209ENST00000540819 WDR18Q9BV38 432 aa6.83□□□□□ -1.32
PRKDC-209ENST00000540819 TMX4Q9H1E5 349 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-209ENST00000540819 INTUQ9ULD6 942 aa6.83□□□□□ -1.32
PRKDC-209ENST00000540819 GSG1L2A8MUP6 293 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 TBX3O15119 743 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 DYNC1LI2O43237 492 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-209ENST00000540819 KATNA1O75449 491 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 C8AP07357 584 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 FCGRTP55899 365 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 MLC1Q15049 377 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 GFOD2Q3B7J2 385 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 GRAMD1BQ3KR37 738 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 INO80DQ53TQ3 878 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-209ENST00000540819 FAM102BQ5T8I3 360 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 AGMOQ6ZNB7 445 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 CCDC84Q86UT8 332 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-209ENST00000540819 UBR7Q8N806 425 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 E2F7Q96AV8 911 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 ATXN3LQ9H3M9 355 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 PPP1R9AQ9ULJ8 1098 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 ZNRF3Q9ULT6 936 aa6.82□□□□□ -1.32
PRKDC-209ENST00000540819 ARID1BQ8NFD5 2236 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-209ENST00000540819 MCM4P33991 863 aa6.81□□□□□ -1.32
PRKDC-209ENST00000540819 PDE6BP35913 854 aa6.81□□□□□ -1.32
PRKDC-209ENST00000540819 ZNF157P51786 506 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-209ENST00000540819 RPS26P62854 115 aaKnown RBP6.81□□□□□ -1.32
PRKDC-209ENST00000540819 PURAQ00577 322 aaKnown RBP6.81□□□□□ -1.32
PRKDC-209ENST00000540819 CWF19L2Q2TBE0 894 aaKnown RBP6.81□□□□□ -1.32
PRKDC-209ENST00000540819 RPS26P11Q5JNZ5 115 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-209ENST00000540819 ACBD5Q5T8D3 534 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-209ENST00000540819 ARHGAP27Q6ZUM4 889 aa6.81□□□□□ -1.32
PRKDC-209ENST00000540819 DGKHQ86XP1 1220 aa6.81□□□□□ -1.32
PRKDC-209ENST00000540819 PASD1Q8IV76 773 aa6.81□□□□□ -1.32
PRKDC-209ENST00000540819 REXO1Q8N1G1 1221 aaKnown RBP6.81□□□□□ -1.32
PRKDC-209ENST00000540819 C19orf47Q8N9M1 422 aaKnown RBP6.81□□□□□ -1.32
PRKDC-209ENST00000540819 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-209ENST00000540819 ZC3H12CQ9C0D7 883 aaKnown RBP6.81□□□□□ -1.32
PRKDC-209ENST00000540819 CEP44Q9C0F1 390 aa6.81□□□□□ -1.32
PRKDC-209ENST00000540819 AKAP2Q9Y2D5 859 aa6.81□□□□□ -1.32
PRKDC-209ENST00000540819 DNAJC25-GNG10A0A024R161 153 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 CFAP69A5D8W1 941 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 RNGTTO60942 597 aaKnown RBP6.8□□□□□ -1.32
PRKDC-209ENST00000540819 EYA4O95677 639 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 FAM153BP0C7A2 387 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 BNIP3Q12983 259 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 MPP2Q14168 576 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 ZNF792Q3KQV3 632 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 EFCAB2Q5VUJ9 269 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 DTHD1Q6ZMT9 781 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 LSRQ86X29 649 aaPredicted RBP6.8□□□□□ -1.32
PRKDC-209ENST00000540819 FAM178BQ8IXR5 827 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 NETO1Q8TDF5 533 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 RUNDC1Q96C34 613 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 CHMP4CQ96CF2 233 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 KIF2CQ99661 725 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 SPATA9Q9BWV2 254 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 LZTS1Q9Y250 596 aa6.8□□□□□ -1.32
PRKDC-209ENST00000540819 TMEM238LA0A1B0GVL6 79 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 CCER2I3L3R5 266 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 TMPRSS2O15393 492 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 TLR3O15455 904 aaKnown RBP6.79□□□□□ -1.32
PRKDC-209ENST00000540819 FBXO24O75426 580 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 IFIT2P09913 472 aaKnown RBP6.79□□□□□ -1.32
PRKDC-209ENST00000540819 FAM87AP0C7U9 286 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 TFE3P19532 575 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-209ENST00000540819 ID3Q02535 119 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 PPP2R5EQ16537 467 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 TTBK2Q6IQ55 1244 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 ZNF280DQ6N043 979 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 ZNF574Q6ZN55 896 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-209ENST00000540819 DDX46Q7L014 1031 aaKnown RBP6.79□□□□□ -1.32
PRKDC-209ENST00000540819 SPRED2Q7Z698 418 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 SMYD4Q8IYR2 804 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-209ENST00000540819 SPICE1Q8N0Z3 855 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms