RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CPLX3Q8WVH0 158 aa6.14□□□□□ -1.43
MDM2-227ENST00000540709 LINC01599Q8WXQ3 324 aa6.14□□□□□ -1.43
MDM2-227ENST00000540709 BRF1Q92994 677 aa6.14□□□□□ -1.43
MDM2-227ENST00000540709 TM9SF2Q99805 663 aa6.14□□□□□ -1.43
MDM2-227ENST00000540709 C1QTNF9P0C862 333 aa6.13□□□□□ -1.43
MDM2-227ENST00000540709 VAMP1P23763 118 aa6.13□□□□□ -1.43
MDM2-227ENST00000540709 GUCY2CP25092 1073 aa6.13□□□□□ -1.43
MDM2-227ENST00000540709 PMS1P54277 932 aaKnown RBP6.13□□□□□ -1.43
MDM2-227ENST00000540709 PPP2R5EQ16537 467 aa6.13□□□□□ -1.43
MDM2-227ENST00000540709 BBS9Q3SYG4 887 aa6.13□□□□□ -1.43
MDM2-227ENST00000540709 CWF19L1Q69YN2 538 aaKnown RBP6.13□□□□□ -1.43
MDM2-227ENST00000540709 METTL16Q86W50 562 aaKnown RBP6.13□□□□□ -1.43
MDM2-227ENST00000540709 ANKLE2Q86XL3 938 aa6.13□□□□□ -1.43
MDM2-227ENST00000540709 GPRASP2Q96D09 838 aa6.13□□□□□ -1.43
MDM2-227ENST00000540709 INTS4Q96HW7 963 aaKnown RBP6.13□□□□□ -1.43
MDM2-227ENST00000540709 MAP6Q96JE9 813 aa6.13□□□□□ -1.43
MDM2-227ENST00000540709 HHIPL1Q96JK4 782 aa6.13□□□□□ -1.43
MDM2-227ENST00000540709 G6PC3Q9BUM1 346 aa6.13□□□□□ -1.43
MDM2-227ENST00000540709 CWC22Q9HCG8 908 aaKnown RBP6.13□□□□□ -1.43
MDM2-227ENST00000540709 YBX2Q9Y2T7 364 aaKnown RBP6.13□□□□□ -1.43
MDM2-227ENST00000540709 TMEM82A0PJX8 343 aa6.12□□□□□ -1.43
MDM2-227ENST00000540709 UNCXA6NJT0 531 aa6.12□□□□□ -1.43
MDM2-227ENST00000540709 SDHBP21912 280 aa6.12□□□□□ -1.43
MDM2-227ENST00000540709 CTSKP43235 329 aa6.12□□□□□ -1.43
MDM2-227ENST00000540709 EIF6P56537 245 aaKnown RBP6.12□□□□□ -1.43
MDM2-227ENST00000540709 RTP1P59025 263 aa6.12□□□□□ -1.43
MDM2-227ENST00000540709 NR0B2Q15466 257 aa6.12□□□□□ -1.43
MDM2-227ENST00000540709 AXDND1Q5T1B0 1012 aaPredicted RBP6.12□□□□□ -1.43
MDM2-227ENST00000540709 ADGRF1Q5T601 910 aa6.12□□□□□ -1.43
MDM2-227ENST00000540709 ATG14Q6ZNE5 492 aa6.12□□□□□ -1.43
MDM2-227ENST00000540709 LSRQ86X29 649 aaPredicted RBP6.12□□□□□ -1.43
MDM2-227ENST00000540709 AP5S1Q9NUS5 200 aa6.12□□□□□ -1.43
MDM2-227ENST00000540709 KIAA1522Q9P206 1035 aaPredicted RBP6.12□□□□□ -1.43
MDM2-227ENST00000540709 NPIPB6E9PJ23 425 aa6.11□□□□□ -1.43
MDM2-227ENST00000540709 ETV2O00321 342 aaPredicted RBP6.11□□□□□ -1.43
MDM2-227ENST00000540709 GSTM1P09488 218 aa6.11□□□□□ -1.43
MDM2-227ENST00000540709 VAV1P15498 845 aa6.11□□□□□ -1.43
MDM2-227ENST00000540709 NASPP49321 788 aaPredicted RBP6.11□□□□□ -1.43
MDM2-227ENST00000540709 SNX17Q15036 470 aa6.11□□□□□ -1.43
MDM2-227ENST00000540709 GNPTABQ3T906 1256 aa6.11□□□□□ -1.43
MDM2-227ENST00000540709 PPFIBP1Q86W92 1011 aa6.11□□□□□ -1.43
MDM2-227ENST00000540709 NAT16Q8N8M0 369 aa6.11□□□□□ -1.43
MDM2-227ENST00000540709 PCDHB10Q9UN67 800 aa6.11□□□□□ -1.43
MDM2-227ENST00000540709 TCAF2A6NFQ2 919 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 BMP8BP34820 402 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 COL9A2Q14055 689 aaPredicted RBP6.1□□□□□ -1.43
MDM2-227ENST00000540709 PPP2R5DQ14738 602 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 KIR3DS1Q14943 382 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 ADAT2Q7Z6V5 191 aaKnown RBP6.1□□□□□ -1.43
MDM2-227ENST00000540709 IRF2BP1Q8IU81 584 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 RGS22Q8NE09 1264 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 ADCY4Q8NFM4 1077 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 TOX2Q96NM4 488 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 SLC26A8Q96RN1 970 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 SGPP1Q9BX95 441 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 SRRTQ9BXP5 876 aaKnown RBP6.1□□□□□ -1.43
MDM2-227ENST00000540709 GP6Q9HCN6 339 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 INPP5FQ9Y2H2 1132 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 GPR55Q9Y2T6 319 aaPredicted RBP6.1□□□□□ -1.43
MDM2-227ENST00000540709 ZNF281Q9Y2X9 895 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 TAF6LQ9Y6J9 622 aa6.1□□□□□ -1.43
MDM2-227ENST00000540709 A0A1W2PQ27 194 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 A0A1W2PQ64 194 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 A0A1W2PQC6 194 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 A0A1W2PQD8 194 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 OR14I1A6ND48 311 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 H0Y8X5 98 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 TSPAN15O95858 294 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 EFEMP2O95967 443 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 GSNP06396 782 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 KIR2DL1P43626 348 aaPredicted RBP6.09□□□□□ -1.43
MDM2-227ENST00000540709 KIR2DL2P43627 348 aaPredicted RBP6.09□□□□□ -1.43
MDM2-227ENST00000540709 ZNF445P59923 1031 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 TCEAL1Q15170 157 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 TAB3Q8N5C8 712 aaPredicted RBP6.09□□□□□ -1.43
MDM2-227ENST00000540709 RBBP8NLQ8NC74 664 aaPredicted RBP6.09□□□□□ -1.43
MDM2-227ENST00000540709 SHISA4Q96DD7 197 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 FCRL2Q96LA5 508 aaPredicted RBP6.09□□□□□ -1.43
MDM2-227ENST00000540709 SPATA32Q96LK8 384 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 ZDHHC15Q96MV8 337 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 PLCD4Q9BRC7 762 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 ACBD3Q9H3P7 528 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 NOL6Q9H6R4 1146 aaKnown RBP6.09□□□□□ -1.43
MDM2-227ENST00000540709 CCSER2Q9H7U1 834 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 TNFRSF10DQ9UBN6 386 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 ZNF451Q9Y4E5 1061 aa6.09□□□□□ -1.43
MDM2-227ENST00000540709 LTBP3Q9NS15 1303 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 NOTOA8MTQ0 251 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 SHOXO15266 292 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 NRDCO43847 1150 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 ZNF205O95201 554 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 CD3EP07766 207 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 ITGA4P13612 1032 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 PRKCAP17252 672 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 CD247P20963 164 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 CFPP27918 469 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 GALNT18Q6P9A2 607 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 NLRX1Q86UT6 975 aa6.08□□□□□ -1.44
MDM2-227ENST00000540709 LRRC56Q8IYG6 542 aaPredicted RBP6.08□□□□□ -1.44
MDM2-227ENST00000540709 FIBCD1Q8N539 461 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms