RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TRIB2Q92519 343 aa21.53■■□□□ 1.04
SNRPA1-203ENST00000540017 SLC38A10Q9HBR0 1119 aa21.53■■□□□ 1.04
SNRPA1-203ENST00000540017 PDHBP11177 359 aa21.52■■□□□ 1.04
SNRPA1-203ENST00000540017 XRCC5P13010 732 aaKnown RBP21.52■■□□□ 1.04
SNRPA1-203ENST00000540017 STAT2P52630 851 aa21.52■■□□□ 1.04
SNRPA1-203ENST00000540017 DCAF4Q8WV16 495 aa21.52■■□□□ 1.04
SNRPA1-203ENST00000540017 ANKS1AQ92625 1134 aa21.52■■□□□ 1.04
SNRPA1-203ENST00000540017 MROH8Q9H579 483 aa21.52■■□□□ 1.04
SNRPA1-203ENST00000540017 RAVER2Q9HCJ3 691 aaKnown RBP21.52■■□□□ 1.04
SNRPA1-203ENST00000540017 ANO2Q9NQ90 1003 aa21.52■■□□□ 1.04
SNRPA1-203ENST00000540017 RIPK3Q9Y572 518 aa21.52■■□□□ 1.04
SNRPA1-203ENST00000540017 IVNS1ABPQ9Y6Y0 642 aa21.52■■□□□ 1.04
SNRPA1-203ENST00000540017 TNKSO95271 1327 aa21.52■■□□□ 1.03
SNRPA1-203ENST00000540017 PLA2G6O60733 806 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 ZBED4O75132 1171 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 CCL5P13501 91 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 RGS2P41220 211 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 SNAP25P60880 206 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 CCDC96Q2M329 555 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 FAM160B2Q86V87 743 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 CPXCR1Q8N123 301 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 NPLOC4Q8TAT6 608 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 CHURC1Q8WUH1 139 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 APBA2Q99767 749 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 TMEM106CQ9BVX2 250 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 UNC93B1Q9H1C4 597 aa21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 FRMPD2Q68DX3 1309 aaPredicted RBP21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 RBBP6Q7Z6E9 1792 aaKnown RBP21.51■■□□□ 1.03
SNRPA1-203ENST00000540017 SLC27A2O14975 620 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 ATP2A1O14983 1001 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 COBLO75128 1261 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 SLC25A27O95847 323 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 HMGCRP04035 888 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 SNHG28P0DPA3 235 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 EN2P19622 333 aaPredicted RBP21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 ADORA2AP29274 412 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 SLC16A2P36021 539 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 UBXN2AP68543 259 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 IKQ13123 557 aaPredicted RBP21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 COL9A3Q14050 684 aaPredicted RBP21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 NECTIN1Q15223 517 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 SEC23AQ15436 765 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 CCDC178Q5BJE1 867 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 SNRNP48Q6IEG0 339 aaKnown RBP21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 TEX13BQ9BXU2 312 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 GPCPD1Q9NPB8 672 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 FLRT1Q9NZU1 646 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 PRR12Q9ULL5 1215 aa21.5■■□□□ 1.03
SNRPA1-203ENST00000540017 MKI67P46013 3256 aaKnown RBP21.49■■□□□ 1.03
SNRPA1-203ENST00000540017 STRNO43815 780 aa21.49■■□□□ 1.03
SNRPA1-203ENST00000540017 HOXC6P09630 235 aa21.49■■□□□ 1.03
SNRPA1-203ENST00000540017 TRDNQ13061 729 aa21.49■■□□□ 1.03
SNRPA1-203ENST00000540017 PNMA1Q8ND90 353 aa21.49■■□□□ 1.03
SNRPA1-203ENST00000540017 UBAC1Q9BSL1 405 aa21.49■■□□□ 1.03
SNRPA1-203ENST00000540017 RNF208Q9H0X6 261 aa21.49■■□□□ 1.03
SNRPA1-203ENST00000540017 ZNF236Q9UL36 1845 aa21.49■■□□□ 1.03
SNRPA1-203ENST00000540017 KIAA0100Q14667 2235 aaKnown RBP21.49■■□□□ 1.03
SNRPA1-203ENST00000540017 ZNF536O15090 1300 aa21.49■■□□□ 1.03
SNRPA1-203ENST00000540017 SLC4A3P48751 1232 aa21.48■■□□□ 1.03
SNRPA1-203ENST00000540017 ZNF543Q08ER8 600 aa21.48■■□□□ 1.03
SNRPA1-203ENST00000540017 CREB3L3Q68CJ9 461 aa21.48■■□□□ 1.03
SNRPA1-203ENST00000540017 CASC1Q6TDU7 716 aa21.48■■□□□ 1.03
SNRPA1-203ENST00000540017 BTNL9Q6UXG8 535 aa21.48■■□□□ 1.03
SNRPA1-203ENST00000540017 CHST3Q7LGC8 479 aa21.48■■□□□ 1.03
SNRPA1-203ENST00000540017 NCOA7Q8NI08 942 aa21.48■■□□□ 1.03
SNRPA1-203ENST00000540017 KAT14Q9H8E8 782 aa21.48■■□□□ 1.03
SNRPA1-203ENST00000540017 SENP2Q9HC62 589 aa21.48■■□□□ 1.03
SNRPA1-203ENST00000540017 GOLGA8HP0CJ92 632 aa21.47■■□□□ 1.03
SNRPA1-203ENST00000540017 FCER1AP12319 257 aa21.47■■□□□ 1.03
SNRPA1-203ENST00000540017 ZKSCAN1P17029 563 aaPredicted RBP21.47■■□□□ 1.03
SNRPA1-203ENST00000540017 ANTXR2P58335 489 aa21.47■■□□□ 1.03
SNRPA1-203ENST00000540017 RALYLQ86SE5 291 aaKnown RBP21.47■■□□□ 1.03
SNRPA1-203ENST00000540017 MB21D2Q8IYB1 491 aaPredicted RBP21.47■■□□□ 1.03
SNRPA1-203ENST00000540017 ABRAQ8N0Z2 381 aa21.47■■□□□ 1.03
SNRPA1-203ENST00000540017 AGBL1Q96MI9 1066 aa21.47■■□□□ 1.03
SNRPA1-203ENST00000540017 CTDP1Q9Y5B0 961 aaPredicted RBP21.47■■□□□ 1.03
SNRPA1-203ENST00000540017 IGHA2P01877 340 aa21.46■■□□□ 1.03
SNRPA1-203ENST00000540017 FDX1P10109 184 aa21.46■■□□□ 1.03
SNRPA1-203ENST00000540017 OAZ1P54368 228 aa21.46■■□□□ 1.03
SNRPA1-203ENST00000540017 MAP3K21Q5TCX8 1036 aa21.46■■□□□ 1.03
SNRPA1-203ENST00000540017 SYDE2Q5VT97 1194 aa21.46■■□□□ 1.03
SNRPA1-203ENST00000540017 DPP9Q86TI2 863 aa21.46■■□□□ 1.03
SNRPA1-203ENST00000540017 SHISA4Q96DD7 197 aa21.46■■□□□ 1.03
SNRPA1-203ENST00000540017 MMP19Q99542 508 aa21.46■■□□□ 1.03
SNRPA1-203ENST00000540017 CPVLQ9H3G5 476 aa21.46■■□□□ 1.03
SNRPA1-203ENST00000540017 ZNFX1Q9P2E3 1918 aaKnown RBP21.46■■□□□ 1.03
SNRPA1-203ENST00000540017 PGK2P07205 417 aa21.45■■□□□ 1.02
SNRPA1-203ENST00000540017 GJB1P08034 283 aa21.45■■□□□ 1.02
SNRPA1-203ENST00000540017 PRKAR2AP13861 404 aaKnown RBP21.45■■□□□ 1.02
SNRPA1-203ENST00000540017 TAL1P17542 331 aaPredicted RBP21.45■■□□□ 1.02
SNRPA1-203ENST00000540017 COPB2P35606 906 aa21.45■■□□□ 1.02
SNRPA1-203ENST00000540017 CACNB2Q08289 660 aaPredicted RBP21.45■■□□□ 1.02
SNRPA1-203ENST00000540017 IFIT1BQ5T764 474 aaKnown RBP21.45■■□□□ 1.02
SNRPA1-203ENST00000540017 CCDC174Q6PII3 467 aa21.45■■□□□ 1.02
SNRPA1-203ENST00000540017 TRMT44Q8IYL2 757 aaKnown RBP21.45■■□□□ 1.02
SNRPA1-203ENST00000540017 PAK6Q9NQU5 681 aaPredicted RBP21.45■■□□□ 1.02
SNRPA1-203ENST00000540017 TNRC18O15417 2968 aaPredicted RBP21.44■■□□□ 1.02
SNRPA1-203ENST00000540017 IFIT3O14879 490 aaKnown RBP21.44■■□□□ 1.02
SNRPA1-203ENST00000540017 IGDCC4Q8TDY8 1250 aa21.44■■□□□ 1.02
SNRPA1-203ENST00000540017 RANBP17Q9H2T7 1088 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms