RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PTPAQ15257 358 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 CCDC96Q2M329 555 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 SHROOM1Q2M3G4 852 aaPredicted RBP19.36■□□□□ 0.69
COPS3-212ENST00000539941 SLFN13Q68D06 897 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 HEATR3Q7Z4Q2 680 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 GPKOWQ92917 476 aaPredicted RBP eCLIP19.36■□□□□ 0.69
COPS3-212ENST00000539941 GMCL1Q96IK5 515 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 ARHGEF10LQ9HCE6 1279 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.36■□□□□ 0.69
COPS3-212ENST00000539941 GINM1Q9NU53 330 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 ZBTB21Q9ULJ3 1066 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 PCDHA7Q9UN72 937 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 CEP131Q9UPN4 1083 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 VEGFAP15692 232 aaPredicted RBP19.35■□□□□ 0.69
COPS3-212ENST00000539941 LIG1P18858 919 aa19.35■□□□□ 0.69
COPS3-212ENST00000539941 TRAPPC10P48553 1259 aa19.35■□□□□ 0.69
COPS3-212ENST00000539941 TOB1P50616 345 aaPredicted RBP19.35■□□□□ 0.69
COPS3-212ENST00000539941 JAG1P78504 1218 aa19.35■□□□□ 0.69
COPS3-212ENST00000539941 APOBEC3FQ8IUX4 373 aaKnown RBP19.35■□□□□ 0.69
COPS3-212ENST00000539941 BLIDQ8IZY5 108 aa19.35■□□□□ 0.69
COPS3-212ENST00000539941 TEPSINQ96N21 525 aa19.35■□□□□ 0.69
COPS3-212ENST00000539941 GPCPD1Q9NPB8 672 aa19.35■□□□□ 0.69
COPS3-212ENST00000539941 HACL1Q9UJ83 578 aa19.35■□□□□ 0.69
COPS3-212ENST00000539941 ESYT2A0FGR8 921 aa19.34■□□□□ 0.69
COPS3-212ENST00000539941 BMP15O95972 392 aa19.34■□□□□ 0.69
COPS3-212ENST00000539941 CAP2P40123 477 aa19.34■□□□□ 0.69
COPS3-212ENST00000539941 SLC1A4P43007 532 aa19.34■□□□□ 0.69
COPS3-212ENST00000539941 LRSAM1Q6UWE0 723 aa19.34■□□□□ 0.69
COPS3-212ENST00000539941 CCDC73Q6ZRK6 1079 aa19.34■□□□□ 0.69
COPS3-212ENST00000539941 HOOK2Q96ED9 719 aa19.34■□□□□ 0.69
COPS3-212ENST00000539941 PIGSQ96S52 555 aa19.34■□□□□ 0.69
COPS3-212ENST00000539941 UBA5Q9GZZ9 404 aa19.34■□□□□ 0.69
COPS3-212ENST00000539941 ZMYND12Q9H0C1 365 aa19.34■□□□□ 0.69
COPS3-212ENST00000539941 CPVLQ9H3G5 476 aa19.34■□□□□ 0.69
COPS3-212ENST00000539941 SYCE3A1L190 88 aa19.33■□□□□ 0.69
COPS3-212ENST00000539941 F5H6K3 240 aa19.33■□□□□ 0.69
COPS3-212ENST00000539941 KLRC3Q07444 240 aa19.33■□□□□ 0.69
COPS3-212ENST00000539941 TPRNQ4KMQ1 711 aa19.33■□□□□ 0.69
COPS3-212ENST00000539941 PPP1R18Q6NYC8 613 aa19.33■□□□□ 0.69
COPS3-212ENST00000539941 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.33■□□□□ 0.69
COPS3-212ENST00000539941 CDAN1Q8IWY9 1227 aa19.33■□□□□ 0.69
COPS3-212ENST00000539941 CCAR1Q8IX12 1150 aaKnown RBP19.33■□□□□ 0.69
COPS3-212ENST00000539941 RBM46Q8TBY0 533 aaKnown RBP19.33■□□□□ 0.69
COPS3-212ENST00000539941 MTMR8Q96EF0 704 aa19.33■□□□□ 0.69
COPS3-212ENST00000539941 SH2D4AQ9H788 454 aa19.33■□□□□ 0.69
COPS3-212ENST00000539941 PNMA6FA0A0J9YX94 578 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 ASNSP08243 561 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 GNA11P29992 359 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 NAPAP54920 295 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 TYW1BQ6NUM6 668 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 DPY19L2Q6NUT2 758 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 MIGA2Q7L4E1 593 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 HOMER1Q86YM7 354 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 ADGRF4Q8IZF3 695 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 MRPS27Q92552 414 aaKnown RBP19.33■□□□□ 0.68
COPS3-212ENST00000539941 DEFB129Q9H1M3 183 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 JMJD4Q9H9V9 463 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 VAT1LQ9HCJ6 419 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 C6orf50Q9HD87 102 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 DACT1Q9NYF0 836 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 TMX2Q9Y320 296 aa19.33■□□□□ 0.68
COPS3-212ENST00000539941 TRIM75PA6NK02 468 aa19.32■□□□□ 0.68
COPS3-212ENST00000539941 M0R2N6 131 aa19.32■□□□□ 0.68
COPS3-212ENST00000539941 AXDND1Q5T1B0 1012 aaPredicted RBP19.32■□□□□ 0.68
COPS3-212ENST00000539941 KCTD1Q719H9 257 aa19.32■□□□□ 0.68
COPS3-212ENST00000539941 NUP62CLQ9H1M0 184 aa19.32■□□□□ 0.68
COPS3-212ENST00000539941 GOPCQ9HD26 462 aa19.32■□□□□ 0.68
COPS3-212ENST00000539941 PPP2R3BQ9Y5P8 575 aa19.32■□□□□ 0.68
COPS3-212ENST00000539941 CUTAO60888 179 aa19.31■□□□□ 0.68
COPS3-212ENST00000539941 NDUFB10O96000 172 aa19.31■□□□□ 0.68
COPS3-212ENST00000539941 FAM160A1Q05DH4 1040 aa19.31■□□□□ 0.68
COPS3-212ENST00000539941 DCAF15Q66K64 600 aa19.31■□□□□ 0.68
COPS3-212ENST00000539941 FSIP1Q8NA03 581 aa19.31■□□□□ 0.68
COPS3-212ENST00000539941 PHF20L1A8MW92 1017 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 ZBTB5O15062 677 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 NR1I2O75469 434 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 CMA1P23946 247 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 TTBK2Q6IQ55 1244 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 GAS2L3Q86XJ1 694 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 SMAP1Q8IYB5 467 aaPredicted RBP19.3■□□□□ 0.68
COPS3-212ENST00000539941 TRPM4Q8TD43 1214 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 CLSTN2Q9H4D0 955 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 PCDHB6Q9Y5E3 794 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 ASTN2O75129 1339 aaPredicted RBP19.3■□□□□ 0.68
COPS3-212ENST00000539941 A0A1W2PRG0 241 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 DDNO94850 711 aaPredicted RBP19.3■□□□□ 0.68
COPS3-212ENST00000539941 BMP3P12645 472 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 CCDC173Q0VFZ6 552 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 EARS2Q5JPH6 523 aaKnown RBP19.3■□□□□ 0.68
COPS3-212ENST00000539941 BTNL9Q6UXG8 535 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 KRI1Q8N9T8 703 aaKnown RBP19.3■□□□□ 0.68
COPS3-212ENST00000539941 ENGASEQ8NFI3 743 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 PRDM4Q9UKN5 801 aa19.3■□□□□ 0.68
COPS3-212ENST00000539941 ATAD5Q96QE3 1844 aa19.29■□□□□ 0.68
COPS3-212ENST00000539941 PITPNM2Q9BZ72 1349 aa19.29■□□□□ 0.68
COPS3-212ENST00000539941 CCDC194A0A1B0GVG4 234 aa19.29■□□□□ 0.68
COPS3-212ENST00000539941 FAM205CA6NFA0 338 aa19.29■□□□□ 0.68
COPS3-212ENST00000539941 SMCO2A6NFE2 343 aa19.29■□□□□ 0.68
COPS3-212ENST00000539941 CTNND1O60716 968 aaKnown RBP19.29■□□□□ 0.68
COPS3-212ENST00000539941 LMOD1P29536 600 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms