RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 LAMA3Q16787 3333 aa19.91■□□□□ 0.78
DDB1-215ENST00000539712 ATP2A1O14983 1001 aa19.9■□□□□ 0.78
DDB1-215ENST00000539712 PGK2P07205 417 aa19.9■□□□□ 0.78
DDB1-215ENST00000539712 PDE4AP27815 886 aa19.9■□□□□ 0.78
DDB1-215ENST00000539712 C11orf49Q9H6J7 331 aa19.9■□□□□ 0.78
DDB1-215ENST00000539712 SLC38A10Q9HBR0 1119 aa19.9■□□□□ 0.78
DDB1-215ENST00000539712 DDX20Q9UHI6 824 aaKnown RBP19.9■□□□□ 0.78
DDB1-215ENST00000539712 ZMYM6O95789 1325 aa19.9■□□□□ 0.78
DDB1-215ENST00000539712 CCDC171Q6TFL3 1326 aa19.9■□□□□ 0.78
DDB1-215ENST00000539712 IRX6P78412 446 aaPredicted RBP19.89■□□□□ 0.77
DDB1-215ENST00000539712 ZNF792Q3KQV3 632 aa19.89■□□□□ 0.77
DDB1-215ENST00000539712 PRAMEF19Q5SWL8 479 aa19.89■□□□□ 0.77
DDB1-215ENST00000539712 GMCL1Q96IK5 515 aa19.89■□□□□ 0.77
DDB1-215ENST00000539712 MMP19Q99542 508 aa19.89■□□□□ 0.77
DDB1-215ENST00000539712 TEX13BQ9BXU2 312 aa19.89■□□□□ 0.77
DDB1-215ENST00000539712 FEM1BQ9UK73 627 aa19.89■□□□□ 0.77
DDB1-215ENST00000539712 NR2E3Q9Y5X4 410 aa19.89■□□□□ 0.77
DDB1-215ENST00000539712 TSPY2A6NKD2 308 aa19.88■□□□□ 0.77
DDB1-215ENST00000539712 EVI5O60447 810 aa19.88■□□□□ 0.77
DDB1-215ENST00000539712 RANBP6O60518 1105 aaKnown RBP19.88■□□□□ 0.77
DDB1-215ENST00000539712 BMP3P12645 472 aa19.88■□□□□ 0.77
DDB1-215ENST00000539712 SNRNP48Q6IEG0 339 aaKnown RBP19.88■□□□□ 0.77
DDB1-215ENST00000539712 RASGRP2Q7LDG7 609 aa19.88■□□□□ 0.77
DDB1-215ENST00000539712 KIFC2Q96AC6 838 aa19.88■□□□□ 0.77
DDB1-215ENST00000539712 FRMPD3Q5JV73 1810 aa19.88■□□□□ 0.77
DDB1-215ENST00000539712 MCCP23508 829 aa19.87■□□□□ 0.77
DDB1-215ENST00000539712 COPB2P35606 906 aa19.87■□□□□ 0.77
DDB1-215ENST00000539712 CHRDL2Q6WN34 429 aa19.87■□□□□ 0.77
DDB1-215ENST00000539712 RAVER2Q9HCJ3 691 aaKnown RBP19.87■□□□□ 0.77
DDB1-215ENST00000539712 SLC5A4Q9NY91 659 aa19.87■□□□□ 0.77
DDB1-215ENST00000539712 STX8Q9UNK0 236 aa19.87■□□□□ 0.77
DDB1-215ENST00000539712 DIS3Q9Y2L1 958 aaKnown RBP19.87■□□□□ 0.77
DDB1-215ENST00000539712 DNAJC25-GNG10A0A024R161 153 aa19.86■□□□□ 0.77
DDB1-215ENST00000539712 TMEM232C9JQI7 657 aa19.86■□□□□ 0.77
DDB1-215ENST00000539712 ZBED4O75132 1171 aa19.86■□□□□ 0.77
DDB1-215ENST00000539712 CNGA1P29973 690 aa19.86■□□□□ 0.77
DDB1-215ENST00000539712 HAND2P61296 217 aa19.86■□□□□ 0.77
DDB1-215ENST00000539712 KCTD2Q14681 263 aa19.86■□□□□ 0.77
DDB1-215ENST00000539712 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.86■□□□□ 0.77
DDB1-215ENST00000539712 TBC1D10CQ8IV04 446 aa19.86■□□□□ 0.77
DDB1-215ENST00000539712 CPXCR1Q8N123 301 aa19.86■□□□□ 0.77
DDB1-215ENST00000539712 CHMP4CQ96CF2 233 aa19.86■□□□□ 0.77
DDB1-215ENST00000539712 ZNF536O15090 1300 aa19.85■□□□□ 0.77
DDB1-215ENST00000539712 SEPT4O43236 478 aa19.85■□□□□ 0.77
DDB1-215ENST00000539712 MSCO60682 206 aa19.85■□□□□ 0.77
DDB1-215ENST00000539712 PLA2G6O60733 806 aa19.85■□□□□ 0.77
DDB1-215ENST00000539712 CWC27Q6UX04 472 aaKnown RBP19.85■□□□□ 0.77
DDB1-215ENST00000539712 STAG1Q8WVM7 1258 aa19.85■□□□□ 0.77
DDB1-215ENST00000539712 TINF2Q9BSI4 451 aa19.85■□□□□ 0.77
DDB1-215ENST00000539712 IL25Q9H293 177 aa19.85■□□□□ 0.77
DDB1-215ENST00000539712 TCP11L1Q9NUJ3 509 aa19.85■□□□□ 0.77
DDB1-215ENST00000539712 RBM27Q9P2N5 1060 aaKnown RBP19.85■□□□□ 0.77
DDB1-215ENST00000539712 GSPT1P15170 499 aaKnown RBP19.84■□□□□ 0.77
DDB1-215ENST00000539712 TAL1P17542 331 aaPredicted RBP19.84■□□□□ 0.77
DDB1-215ENST00000539712 SLC1A4P43007 532 aa19.84■□□□□ 0.77
DDB1-215ENST00000539712 FXR1P51114 621 aaKnown RBP eCLIP19.84■□□□□ 0.771e-6■■■□□ 17.8
DDB1-215ENST00000539712 OAZ1P54368 228 aa19.84■□□□□ 0.77
DDB1-215ENST00000539712 PPP4R3BQ5MIZ7 849 aa19.84■□□□□ 0.77
DDB1-215ENST00000539712 ANO1Q5XXA6 986 aa19.84■□□□□ 0.77
DDB1-215ENST00000539712 RCSD1Q6JBY9 416 aa19.84■□□□□ 0.77
DDB1-215ENST00000539712 KCTD1Q719H9 257 aa19.84■□□□□ 0.77
DDB1-215ENST00000539712 FGD4Q96M96 766 aa19.84■□□□□ 0.77
DDB1-215ENST00000539712 PLXNA1Q9UIW2 1896 aa19.84■□□□□ 0.77
DDB1-215ENST00000539712 SMCHD1A6NHR9 2005 aa19.83■□□□□ 0.77
DDB1-215ENST00000539712 LAMA2P24043 3122 aaKnown RBP19.83■□□□□ 0.77
DDB1-215ENST00000539712 STAT2P52630 851 aa19.83■□□□□ 0.77
DDB1-215ENST00000539712 LRRC26Q2I0M4 334 aa19.83■□□□□ 0.77
DDB1-215ENST00000539712 RRP12Q5JTH9 1297 aaKnown RBP19.83■□□□□ 0.77
DDB1-215ENST00000539712 AKNAD1Q5T1N1 836 aa19.83■□□□□ 0.77
DDB1-215ENST00000539712 C7orf61Q8IZ16 206 aa19.83■□□□□ 0.77
DDB1-215ENST00000539712 TMEM47Q9BQJ4 181 aa19.83■□□□□ 0.77
DDB1-215ENST00000539712 ZNF865P0CJ78 1059 aaPredicted RBP19.82■□□□□ 0.76
DDB1-215ENST00000539712 FDX1P10109 184 aa19.82■□□□□ 0.76
DDB1-215ENST00000539712 FAM160B2Q86V87 743 aa19.82■□□□□ 0.76
DDB1-215ENST00000539712 CHURC1Q8WUH1 139 aa19.82■□□□□ 0.76
DDB1-215ENST00000539712 AGBL1Q96MI9 1066 aa19.82■□□□□ 0.76
DDB1-215ENST00000539712 DIAPH3Q9NSV4 1193 aa19.82■□□□□ 0.76
DDB1-215ENST00000539712 NRBP1Q9UHY1 535 aa19.82■□□□□ 0.76
DDB1-215ENST00000539712 DNM1LO00429 736 aa19.81■□□□□ 0.76
DDB1-215ENST00000539712 SNAI1O95863 264 aaPredicted RBP19.81■□□□□ 0.76
DDB1-215ENST00000539712 PCP11498 1178 aaKnown RBP19.81■□□□□ 0.76
DDB1-215ENST00000539712 SLC4A3P48751 1232 aa19.81■□□□□ 0.76
DDB1-215ENST00000539712 MFAP1P55081 439 aaKnown RBP19.81■□□□□ 0.76
DDB1-215ENST00000539712 SNAP25P60880 206 aa19.81■□□□□ 0.76
DDB1-215ENST00000539712 TTC22Q5TAA0 569 aa19.81■□□□□ 0.76
DDB1-215ENST00000539712 TTBK2Q6IQ55 1244 aa19.81■□□□□ 0.76
DDB1-215ENST00000539712 MAMDC4Q6UXC1 1216 aa19.81■□□□□ 0.76
DDB1-215ENST00000539712 MFSD6Q6ZSS7 791 aa19.81■□□□□ 0.76
DDB1-215ENST00000539712 CHST13Q8NET6 341 aa19.81■□□□□ 0.76
DDB1-215ENST00000539712 TOMM22Q9NS69 142 aa19.81■□□□□ 0.76
DDB1-215ENST00000539712 PCDH10Q9P2E7 1040 aa19.81■□□□□ 0.76
DDB1-215ENST00000539712 PRR12Q9ULL5 1215 aa19.81■□□□□ 0.76
DDB1-215ENST00000539712 NEDD4P46934 1319 aa19.8■□□□□ 0.76
DDB1-215ENST00000539712 HIP1O00291 1037 aa19.8■□□□□ 0.76
DDB1-215ENST00000539712 TOP1P11387 765 aaKnown RBP19.8■□□□□ 0.76
DDB1-215ENST00000539712 GJC2Q5T442 439 aaPredicted RBP19.8■□□□□ 0.76
DDB1-215ENST00000539712 DCAF4Q8WV16 495 aa19.8■□□□□ 0.76
DDB1-215ENST00000539712 DDX11Q96FC9 970 aa19.8■□□□□ 0.76
DDB1-215ENST00000539712 GDF15Q99988 308 aa19.8■□□□□ 0.76
DDB1-215ENST00000539712 SENP6Q9GZR1 1112 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms