RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 PSMA7O14818 248 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 IPO7O95373 1038 aaKnown RBP14.9□□□□□ -0.02
UBE3B-209ENST00000539584 PARP1P09874 1014 aaKnown RBP14.9□□□□□ -0.02
UBE3B-209ENST00000539584 CASP1P29466 404 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 STAT6P42226 847 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 MEA1Q16626 185 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 CCDC178Q5BJE1 867 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 PIK3AP1Q6ZUJ8 805 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 ADGRA1Q86SQ6 560 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 SRBD1Q8N5C6 995 aaKnown RBP14.9□□□□□ -0.02
UBE3B-209ENST00000539584 DHTKD1Q96HY7 919 aaPredicted RBP14.9□□□□□ -0.02
UBE3B-209ENST00000539584 MTRQ99707 1265 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 SLF1Q9BQI6 1058 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 DISC1Q9NRI5 854 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 ZNHIT6Q9NWK9 470 aaKnown RBP14.9□□□□□ -0.02
UBE3B-209ENST00000539584 TAB2Q9NYJ8 693 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 SAR1BQ9Y6B6 198 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 SLIT2O94813 1529 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 RHOBTB3O94955 611 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 HOXA7P31268 230 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-209ENST00000539584 PRCPP42785 496 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 GNAQP50148 359 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 USP14P54578 494 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 CDK17Q00537 523 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 SBK1Q52WX2 424 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 FIGNQ5HY92 759 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 CTR9Q6PD62 1173 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 FAM114A1Q8IWE2 563 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 GOLGA6L1Q8N7Z2 621 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 ZNF507Q8TCN5 953 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 CCDC47Q96A33 483 aaKnown RBP14.89□□□□□ -0.03
UBE3B-209ENST00000539584 CCSER1Q9C0I3 900 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 BLZF1Q9H2G9 400 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 CCDC87Q9NVE4 849 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 ARPP21Q9UBL0 812 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-209ENST00000539584 LAMB2P55268 1798 aa14.89□□□□□ -0.03
UBE3B-209ENST00000539584 NTSR2O95665 410 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 RHOXF2BP0C7M4 288 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 CAPN2P17655 700 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 PRPHP41219 470 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 DTHD1Q6ZMT9 781 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 BLIDQ8IZY5 108 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 C4orf32Q8N8J7 132 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 RHOXF2Q9BQY4 288 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 TSGA10Q9BZW7 698 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 A0A0U1RQJ8 604 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 TTC26A0AVF1 554 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 BICDL2A1A5D9 508 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 SNAP23O00161 211 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 EXOC5O00471 708 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 WNT7AO00755 349 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 MCM7P33993 719 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 DAGLBQ8NCG7 672 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 GIMAP8Q8ND71 665 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-209ENST00000539584 ATRIPQ8WXE1 791 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 AK8Q96MA6 479 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 CRNKL1Q9BZJ0 848 aaKnown RBP14.88□□□□□ -0.03
UBE3B-209ENST00000539584 BSDC1Q9NW68 430 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-209ENST00000539584 PCDHA4Q9UN74 947 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 ZNF652Q9Y2D9 606 aa14.88□□□□□ -0.03
UBE3B-209ENST00000539584 EIF3CLB5ME19 914 aaKnown RBP14.87□□□□□ -0.03
UBE3B-209ENST00000539584 CAMTA2O94983 1202 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 SRGNP10124 158 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 ITIH3Q06033 890 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 IL17AQ16552 155 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 NOM1Q5C9Z4 860 aaKnown RBP14.87□□□□□ -0.03
UBE3B-209ENST00000539584 CCDC70Q6NSX1 233 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 DGKHQ86XP1 1220 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 IRF2BP1Q8IU81 584 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 ANKS1AQ92625 1134 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 EIF3CQ99613 913 aaKnown RBP14.87□□□□□ -0.03
UBE3B-209ENST00000539584 KBTBD4Q9NVX7 518 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 FEZ2Q9UHY8 353 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-209ENST00000539584 GUCA1BQ9UMX6 200 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 MYH2Q9UKX2 1941 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 A0A1W2PQJ5 194 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 RGL2O15211 777 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 COBLL1Q53SF7 1204 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 CCDC122Q5T0U0 273 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 INTS5Q6P9B9 1019 aaKnown RBP14.87□□□□□ -0.03
UBE3B-209ENST00000539584 ANKRD18AQ8IVF6 992 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 CCDC102AQ96A19 550 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 CHP1Q99653 195 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 RASSF4Q9H2L5 321 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 REXO2Q9Y3B8 237 aaKnown RBP14.87□□□□□ -0.03
UBE3B-209ENST00000539584 CACNA1SQ13698 1873 aa14.87□□□□□ -0.03
UBE3B-209ENST00000539584 USP17L12C9JPN9 530 aa14.86□□□□□ -0.03
UBE3B-209ENST00000539584 USP17L21D6R901 530 aa14.86□□□□□ -0.03
UBE3B-209ENST00000539584 RNF225M0QZC1 329 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-209ENST00000539584 ZBED6P86452 979 aa14.86□□□□□ -0.03
UBE3B-209ENST00000539584 SF3B2Q13435 895 aaKnown RBP14.86□□□□□ -0.03
UBE3B-209ENST00000539584 SF3B3Q15393 1217 aaKnown RBP14.86□□□□□ -0.03
UBE3B-209ENST00000539584 CLEC4GQ6UXB4 293 aa14.86□□□□□ -0.03
UBE3B-209ENST00000539584 SRLQ86TD4 932 aa14.86□□□□□ -0.03
UBE3B-209ENST00000539584 FNBP4Q8N3X1 1017 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-209ENST00000539584 NOA1Q8NC60 698 aaKnown RBP14.86□□□□□ -0.03
UBE3B-209ENST00000539584 STAMQ92783 540 aa14.86□□□□□ -0.03
UBE3B-209ENST00000539584 EXOC1Q9NV70 894 aa14.86□□□□□ -0.03
UBE3B-209ENST00000539584 FAN1Q9Y2M0 1017 aa14.86□□□□□ -0.03
UBE3B-209ENST00000539584 XIRP1Q702N8 1843 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms