RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 NUCB1Q02818 461 aa11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 TAF1CQ15572 869 aaPredicted RBP11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 GADL1Q6ZQY3 521 aa11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 PHTF2Q8N3S3 785 aa11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 APPBP2Q92624 585 aa11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 CDK15Q96Q40 435 aa11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 PUS7LQ9H0K6 701 aaKnown RBP11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 AS3MTQ9HBK9 375 aa11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 ATP8A2Q9NTI2 1148 aa11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 TFIP11Q9UBB9 837 aaKnown RBP11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 SERPINB13Q9UIV8 391 aa11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 PTPRFP10586 1907 aa11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 PHIPQ8WWQ0 1821 aa11.34□□□□□ -0.59
GTF2H3-207ENST00000539429 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 MPHOSPH10O00566 681 aaKnown RBP11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 CXCL11O14625 94 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 PRKAB2O43741 272 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 CHGBP05060 677 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 ASNSP08243 561 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 PTPRAP18433 802 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 CAP2P40123 477 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 MAP3K10Q02779 954 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 VASH1Q7L8A9 365 aaPredicted RBP11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 FASTKD5Q7L8L6 764 aaKnown RBP11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 RNF135Q8IUD6 432 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 BRI3BPQ8WY22 251 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 EVI5LQ96CN4 794 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 CABP5Q9NP86 173 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 DCP1AQ9NPI6 582 aaPredicted RBP11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
GTF2H3-207ENST00000539429 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 ESPNB1AK53 854 aa11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 ATP9BO43861 1147 aa11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 FKTNO75072 461 aa11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 CENPBP07199 599 aaPredicted RBP11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 GNAT2P19087 354 aa11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 TDO2P48775 406 aa11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 ARID5BQ14865 1188 aa11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 CERKLQ49MI3 558 aaPredicted RBP11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 RNF20Q5VTR2 975 aa11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 CCDC84Q86UT8 332 aaPredicted RBP11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 KCTD15Q96SI1 283 aaPredicted RBP11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 PKD2L1Q9P0L9 805 aa11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 DDX60LQ5H9U9 1706 aaKnown RBP11.32□□□□□ -0.6
GTF2H3-207ENST00000539429 MINDY4BA8MYZ0 360 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 BTBD19C9JJ37 291 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 GPR25O00155 361 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 GPAA1O43292 621 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 SKIP12755 728 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 PLCD1P51178 756 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 FOXC1Q12948 553 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 SPP2Q13103 211 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 CRHR2Q13324 411 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 DGKZQ13574 1117 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 RAB3GAP1Q15042 981 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 FAM43AQ8N2R8 423 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 ZNF280CQ8ND82 737 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 OSBP2Q969R2 916 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 FEZ1Q99689 392 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 PTPN18Q99952 460 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 NACAP1Q9BZK3 213 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 EHD4Q9H223 541 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 GINM1Q9NU53 330 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 KCNH4Q9UQ05 1017 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 AFG3L2Q9Y4W6 797 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 SALL3Q9BXA9 1300 aa11.31□□□□□ -0.6
GTF2H3-207ENST00000539429 USP17L12C9JPN9 530 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 USP17L21D6R901 530 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 M0R2C6 588 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 PDHXO00330 501 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 GH2P01242 217 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 CYP2D6P10635 497 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 ANKRD23Q86SG2 305 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 PLEKHM2Q8IWE5 1019 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 STK11IPQ8N1F8 1099 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 ZNF296Q8WUU4 475 aaPredicted RBP11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 STRBPQ96SI9 672 aaKnown RBP11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 SEC62Q99442 399 aaKnown RBP11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 SWAP70Q9UH65 585 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 ZBTB21Q9ULJ3 1066 aa11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 MAFBQ9Y5Q3 323 aaPredicted RBP11.3□□□□□ -0.6
GTF2H3-207ENST00000539429 A0A0G2JLL6 359 aaPredicted RBP11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 PATL2C9JE40 543 aaKnown RBP11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 RGS20O76081 388 aa11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 PABPC4Q13310 644 aaKnown RBP eCLIP11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 RRP1BQ14684 758 aaKnown RBP11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 KIF22Q14807 665 aa11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 ARHGEF6Q15052 776 aa11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 PRRT2Q7Z6L0 340 aaPredicted RBP11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 METTL16Q86W50 562 aaKnown RBP11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 SMCR8Q8TEV9 937 aaPredicted RBP11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 DYNLL2Q96FJ2 89 aa11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 PARK7Q99497 189 aaKnown RBP11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 NAPBQ9H115 298 aa11.29□□□□□ -0.6
GTF2H3-207ENST00000539429 R3HDMLQ9H3Y0 253 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 1004.1 ms