RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 KCNG4Q8TDN1 519 aa12.77□□□□□ -0.37
CTCFL-212ENST00000539382 SYAP1Q96A49 352 aaPredicted RBP12.77□□□□□ -0.37
CTCFL-212ENST00000539382 CLIC6Q96NY7 704 aa12.77□□□□□ -0.37
CTCFL-212ENST00000539382 A0A1B0GVL5 298 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 RAD21O60216 631 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 PPP1R11O60927 126 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-212ENST00000539382 SMARCA1P28370 1054 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 MAP3K10Q02779 954 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 GRIN1Q05586 938 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 KIAA1755Q5JYT7 1200 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 ADGRF4Q8IZF3 695 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 TRPM4Q8TD43 1214 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 NUP88Q99567 741 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-212ENST00000539382 RBSNQ9H1K0 784 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 JMJD4Q9H9V9 463 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 SH3GLB2Q9NR46 395 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 HACL1Q9UJ83 578 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 SBF1O95248 1867 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 F5H6K3 240 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 KLRC3Q07444 240 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 KIF4BQ2VIQ3 1234 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 RILPL1Q5EBL4 403 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 PIK3AP1Q6ZUJ8 805 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 CCDC84Q86UT8 332 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-212ENST00000539382 FSIP1Q8NA03 581 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 ACER1Q8TDN7 264 aa12.76□□□□□ -0.37
CTCFL-212ENST00000539382 RRP36Q96EU6 259 aaKnown RBP12.76□□□□□ -0.37
CTCFL-212ENST00000539382 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.76□□□□□ -0.37
CTCFL-212ENST00000539382 TBC1D12O60347 775 aa12.75□□□□□ -0.37
CTCFL-212ENST00000539382 NDUFA8P51970 172 aa12.75□□□□□ -0.37
CTCFL-212ENST00000539382 CCDC96Q2M329 555 aa12.75□□□□□ -0.37
CTCFL-212ENST00000539382 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
CTCFL-212ENST00000539382 SHC4Q6S5L8 630 aa12.75□□□□□ -0.37
CTCFL-212ENST00000539382 BLIDQ8IZY5 108 aa12.75□□□□□ -0.37
CTCFL-212ENST00000539382 ZBTB21Q9ULJ3 1066 aa12.75□□□□□ -0.37
CTCFL-212ENST00000539382 PCDHA4Q9UN74 947 aa12.75□□□□□ -0.37
CTCFL-212ENST00000539382 PHF20L1A8MW92 1017 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 USP17L10C9JJH3 530 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 PPP6R2O75170 966 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 NDUFB10O96000 172 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 EPS15P42566 896 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 HIRAP54198 1017 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-212ENST00000539382 PRAMEF18Q5VWM3 479 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 FMR1NBQ8N0W7 255 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-212ENST00000539382 COA7Q96BR5 231 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 FUCA2Q9BTY2 467 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 GLIS2Q9BZE0 524 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-212ENST00000539382 RRAGDQ9NQL2 400 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-212ENST00000539382 GPRC5DQ9NZD1 345 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 A0A1W2PQ27 194 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 A0A1W2PQ64 194 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 A0A1W2PQD8 194 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 DDNO94850 711 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-212ENST00000539382 SLC1A4P43007 532 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 SPECC1Q5M775 1068 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
CTCFL-212ENST00000539382 CKAP2LQ8IYA6 745 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 SPICE1Q8N0Z3 855 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 ZMYND12Q9H0C1 365 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 NUP62CLQ9H1M0 184 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 DEFB129Q9H1M3 183 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 CLSTN2Q9H4D0 955 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 PCDHA6Q9UN73 950 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 PCDHA8Q9Y5H6 950 aa12.74□□□□□ -0.37
CTCFL-212ENST00000539382 CAP2P40123 477 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 MMP14P50281 582 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 NAPAP54920 295 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 GPC2Q8N158 579 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 GMCL1P1Q8NEA9 526 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 MRPS27Q92552 414 aaKnown RBP12.73□□□□□ -0.37
CTCFL-212ENST00000539382 MTMR8Q96EF0 704 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 BRMS1Q9HCU9 246 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 FBXO2Q9UK22 296 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-212ENST00000539382 DICER1Q9UPY3 1922 aaKnown RBP12.73□□□□□ -0.37
CTCFL-212ENST00000539382 CALML3P27482 149 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 SNAP25P60880 206 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 FAM160A1Q05DH4 1040 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 ZNF174Q15697 407 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 NBPF12Q5TAG4 269 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-212ENST00000539382 ANGEL2Q5VTE6 544 aaKnown RBP12.73□□□□□ -0.37
CTCFL-212ENST00000539382 DDX19AQ9NUU7 478 aaKnown RBP12.73□□□□□ -0.37
CTCFL-212ENST00000539382 SEC63Q9UGP8 760 aaKnown RBP12.73□□□□□ -0.37
CTCFL-212ENST00000539382 FZD1Q9UP38 647 aa12.73□□□□□ -0.37
CTCFL-212ENST00000539382 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-212ENST00000539382 SMCO2A6NFE2 343 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 TRIM75PA6NK02 468 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 H7C1D1 291 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 CMA1P23946 247 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 TNNI2P48788 182 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 PPP4R3BQ5MIZ7 849 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 RBM43Q6ZSC3 357 aaKnown RBP12.72□□□□□ -0.37
CTCFL-212ENST00000539382 DAGLBQ8NCG7 672 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 DCAF4Q8WV16 495 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 ERCC4Q92889 916 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-212ENST00000539382 TNMDQ9H2S6 317 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 PNMA6FA0A0J9YX94 578 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 PFKFB1P16118 471 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 PTPREP23469 700 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 DLK2Q6UY11 383 aa12.72□□□□□ -0.37
CTCFL-212ENST00000539382 CCDC73Q6ZRK6 1079 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms