RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 CUL4AQ13619 759 aa16.1■□□□□ 0.17
CACNB1-206ENST00000539338 ZMYM1Q5SVZ6 1142 aa16.1■□□□□ 0.17
CACNB1-206ENST00000539338 OR8K1Q8NGG5 319 aa16.1■□□□□ 0.17
CACNB1-206ENST00000539338 CROCC2H7BZ55 1655 aa16.1■□□□□ 0.17
CACNB1-206ENST00000539338 TNS3Q68CZ2 1445 aa16.1■□□□□ 0.17
CACNB1-206ENST00000539338 MSANTD4Q8NCY6 345 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 NKIRAS1Q9NYS0 192 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 LARGE1O95461 756 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 FNBP4Q8N3X1 1017 aaPredicted RBP16.09■□□□□ 0.17
CACNB1-206ENST00000539338 SAR1BQ9Y6B6 198 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 M0R2C6 588 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 COBLO75128 1261 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 CPXCR1Q8N123 301 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 NSUN7Q8NE18 718 aaKnown RBP16.09■□□□□ 0.17
CACNB1-206ENST00000539338 SMC6Q96SB8 1091 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 HACL1Q9UJ83 578 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 PALLDQ8WX93 1383 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 PTPN21Q16825 1174 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 CFAP221Q4G0U5 840 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 UBL4BQ8N7F7 174 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 MED23Q9ULK4 1368 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 ATP2A2P16615 1042 aaKnown RBP16.09■□□□□ 0.17
CACNB1-206ENST00000539338 ETF1P62495 437 aaKnown RBP16.09■□□□□ 0.17
CACNB1-206ENST00000539338 RPS6KA1Q15418 735 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 PNMA1Q8ND90 353 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 CCDC51Q96ER9 411 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 CDC42BPAQ5VT25 1732 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 IQGAP3Q86VI3 1631 aa16.09■□□□□ 0.17
CACNB1-206ENST00000539338 FRMPD2Q68DX3 1309 aaPredicted RBP16.08■□□□□ 0.17
CACNB1-206ENST00000539338 CCDC117Q8IWD4 279 aaPredicted RBP16.08■□□□□ 0.17
CACNB1-206ENST00000539338 GPR161Q8N6U8 529 aaKnown RBP16.08■□□□□ 0.17
CACNB1-206ENST00000539338 RTEL1Q9NZ71 1219 aa16.08■□□□□ 0.17
CACNB1-206ENST00000539338 SETDB1Q15047 1291 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 RDH13Q8NBN7 331 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 SYMPKQ92797 1274 aaKnown RBP16.08■□□□□ 0.16
CACNB1-206ENST00000539338 EEF2KMTQ96G04 330 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 LBHD1Q9BQE6 289 aaPredicted RBP16.08■□□□□ 0.16
CACNB1-206ENST00000539338 AGTPBP1Q9UPW5 1226 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 SCG2P13521 617 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 ARL1P40616 181 aaPredicted RBP16.08■□□□□ 0.16
CACNB1-206ENST00000539338 C11orf57Q6ZUT1 292 aaPredicted RBP16.08■□□□□ 0.16
CACNB1-206ENST00000539338 PCDHA5Q9Y5H7 936 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 CLASP1Q7Z460 1538 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 RPS6KA4O75676 772 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 FLOT1O75955 427 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 IL6STP40189 918 aaPredicted RBP16.08■□□□□ 0.16
CACNB1-206ENST00000539338 UBXN2AP68543 259 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 CHRNDQ07001 517 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 GOLGA8FQ08AF8 430 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 GOLGA8DPQ0D2H9 430 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 ARHGAP44Q17R89 818 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 MFSD14BQ5SR56 506 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 PEX26Q7Z412 305 aa16.08■□□□□ 0.16
CACNB1-206ENST00000539338 LSM14BQ9BX40 385 aaKnown RBP16.08■□□□□ 0.16
CACNB1-206ENST00000539338 MAK16Q9BXY0 300 aaKnown RBP16.08■□□□□ 0.16
CACNB1-206ENST00000539338 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 GTF2IP78347 998 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 SF3A3Q12874 501 aaKnown RBP eCLIP16.07■□□□□ 0.16
CACNB1-206ENST00000539338 PAK2Q13177 524 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 ZNF365Q70YC5 407 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 KIAA1524Q8TCG1 905 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 LRRC45Q96CN5 670 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 TXNDC16Q9P2K2 825 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 PCDHB13Q9Y5F0 798 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 HGSO14964 777 aaPredicted RBP16.07■□□□□ 0.16
CACNB1-206ENST00000539338 STX10O60499 249 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 PDE8BO95263 885 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 ERCC5P28715 1186 aaPredicted RBP16.07■□□□□ 0.16
CACNB1-206ENST00000539338 PTGDRQ13258 359 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 DPCR1Q3MIW9 517 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 B4GALNT4Q76KP1 1039 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 TDRD7Q8NHU6 1098 aaKnown RBP16.07■□□□□ 0.16
CACNB1-206ENST00000539338 TRPM1Q7Z4N2 1603 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 ATP7BP35670 1465 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 ERBB4Q15303 1308 aa16.07■□□□□ 0.16
CACNB1-206ENST00000539338 UBE3CQ15386 1083 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 TPH2Q8IWU9 490 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 ASIC3Q9UHC3 531 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 A0A1W2PQ27 194 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 A0A1W2PQ64 194 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 A0A1W2PQD8 194 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 PTPROQ16827 1216 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 HACE1Q8IYU2 909 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 COA7Q96BR5 231 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 IFT74Q96LB3 600 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 PI16Q6UXB8 463 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 GPBP1Q86WP2 473 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 TRIML1Q8N9V2 468 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 USP40Q9NVE5 1235 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 MYO1AQ9UBC5 1043 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 USTQ9Y2C2 406 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 MAP3K15Q6ZN16 1313 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 KLRF2D3W0D1 207 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 SLC39A14Q15043 492 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 SPATA1Q5VX52 437 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 ARHGEF25Q86VW2 580 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 PAGR1Q9BTK6 254 aa16.06■□□□□ 0.16
CACNB1-206ENST00000539338 NOP56O00567 594 aaKnown RBP16.05■□□□□ 0.16
CACNB1-206ENST00000539338 APOA5Q6Q788 366 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 INTS8Q75QN2 995 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms