RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 DPY19L1Q2PZI1 675 aa4.53□□□□□ -1.68
SNHG1-210ENST00000539303 NOL9Q5SY16 702 aaKnown RBP4.53□□□□□ -1.68
SNHG1-210ENST00000539303 GTF2IRD2BQ6EKJ0 949 aa4.53□□□□□ -1.68
SNHG1-210ENST00000539303 OGFOD3Q6PK18 319 aa4.53□□□□□ -1.68
SNHG1-210ENST00000539303 CRTC3Q6UUV7 619 aa4.53□□□□□ -1.68
SNHG1-210ENST00000539303 PRR23CQ6ZRP0 262 aa4.53□□□□□ -1.68
SNHG1-210ENST00000539303 GTF2IRD2Q86UP8 949 aa4.53□□□□□ -1.68
SNHG1-210ENST00000539303 CDC6Q99741 560 aa4.53□□□□□ -1.68
SNHG1-210ENST00000539303 DHRS4Q9BTZ2 278 aa4.53□□□□□ -1.68
SNHG1-210ENST00000539303 NCOA5Q9HCD5 579 aaKnown RBP4.53□□□□□ -1.68
SNHG1-210ENST00000539303 STOML1Q9UBI4 398 aa4.53□□□□□ -1.68
SNHG1-210ENST00000539303 FHOD1Q9Y613 1164 aa4.53□□□□□ -1.68
SNHG1-210ENST00000539303 NOP56O00567 594 aaKnown RBP4.52□□□□□ -1.69
SNHG1-210ENST00000539303 SIGLEC6O43699 453 aa4.52□□□□□ -1.69
SNHG1-210ENST00000539303 DLX3O60479 287 aa4.52□□□□□ -1.69
SNHG1-210ENST00000539303 C6orf222P0C671 652 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-210ENST00000539303 NCLP19338 710 aaKnown RBP4.52□□□□□ -1.69
SNHG1-210ENST00000539303 ITIH2P19823 946 aa4.52□□□□□ -1.69
SNHG1-210ENST00000539303 PABPC4Q13310 644 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNHG1-210ENST00000539303 NTRK3Q16288 839 aa4.52□□□□□ -1.69
SNHG1-210ENST00000539303 LONRF2Q1L5Z9 754 aa4.52□□□□□ -1.69
SNHG1-210ENST00000539303 SYTL5Q8TDW5 730 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-210ENST00000539303 RCC1LQ96I51 464 aaKnown RBP4.52□□□□□ -1.69
SNHG1-210ENST00000539303 SLC26A8Q96RN1 970 aa4.52□□□□□ -1.69
SNHG1-210ENST00000539303 DSCC1Q9BVC3 393 aa4.52□□□□□ -1.69
SNHG1-210ENST00000539303 CHST7Q9NS84 486 aa4.52□□□□□ -1.69
SNHG1-210ENST00000539303 STXBP3O00186 592 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 DNAJC6O75061 913 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 ZNF865P0CJ78 1059 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-210ENST00000539303 FGFR1P11362 822 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 IFNGR1P15260 489 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 SDSP20132 328 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 CYP7A1P22680 504 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 GFRA1P56159 465 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 DOC2BQ14184 412 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 PLA2G4EQ3MJ16 856 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 RNF187Q5TA31 235 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-210ENST00000539303 CDKAL1Q5VV42 579 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 DENND5AQ6IQ26 1287 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 NSMFQ6X4W1 530 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 MFSD4AQ8N468 514 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 TMEM145Q8NBT3 493 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 SLC7A14Q8TBB6 771 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 C1orf159Q96HA4 380 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 HDAC8Q9BY41 377 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 SLKQ9H2G2 1235 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-210ENST00000539303 NKX2-4Q9H2Z4 354 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 SPC25Q9HBM1 224 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 COL4A3BPQ9Y5P4 624 aa4.51□□□□□ -1.69
SNHG1-210ENST00000539303 ASXL2Q76L83 1435 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 ARNTLO00327 626 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 CD3EP07766 207 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 SNRPB2P08579 225 aaKnown RBP4.5□□□□□ -1.69
SNHG1-210ENST00000539303 ECI1P42126 302 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 KCNJ6P48051 423 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 OXCT1P55809 520 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 AMPD3Q01432 767 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 RASSF7Q02833 373 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 SCRN1Q12765 414 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 NKPD1Q17RQ9 610 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 TM4SF20Q53R12 229 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 RNF43Q68DV7 783 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 FGD2Q7Z6J4 655 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 NIM1KQ8IY84 436 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 UBR7Q8N806 425 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 SHKBP1Q8TBC3 707 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 NINJ1Q92982 152 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 DUSP15Q9H1R2 295 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-210ENST00000539303 SLC52A2Q9HAB3 445 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 LRRC4CQ9HCJ2 640 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 GPRC5CQ9NQ84 441 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 NDOR1Q9UHB4 597 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 GTF2IRD1Q9UHL9 959 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 KCNH3Q9ULD8 1083 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 PLAGL2Q9UPG8 496 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 DIS3Q9Y2L1 958 aaKnown RBP4.5□□□□□ -1.69
SNHG1-210ENST00000539303 TRAF6Q9Y4K3 522 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 ST14Q9Y5Y6 855 aa4.5□□□□□ -1.69
SNHG1-210ENST00000539303 A0A087WZG4 1122 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 A0A087X0B3 334 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 FAM83GA6ND36 823 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 WDR64B1ANS9 1081 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 H3BS24 57 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 IGF2BP3O00425 579 aaKnown RBP eCLIP4.49□□□□□ -1.69
SNHG1-210ENST00000539303 PLD2O14939 933 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 DNAJC8O75937 253 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-210ENST00000539303 THBDP07204 575 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 SRFP11831 508 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 MYCLP1P12525 358 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-210ENST00000539303 KIR3DL1P43629 444 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 SUMO1P63165 101 aaKnown RBP4.49□□□□□ -1.69
SNHG1-210ENST00000539303 AMPD2Q01433 879 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 NFIAQ12857 509 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 KCNT2Q6UVM3 1135 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 C22orf34Q6ZV56 151 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 USP53Q70EK8 1073 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 THNSL2Q86YJ6 484 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 SCUBE1Q8IWY4 988 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 SPACA3Q8IXA5 215 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 ANKRD13AQ8IZ07 590 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms