RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 KAT14Q9H8E8 782 aa17.61■□□□□ 0.41
PRPF19-203ENST00000539180 MTMR7Q9Y216 660 aa17.61■□□□□ 0.41
PRPF19-203ENST00000539180 FDX1P10109 184 aa17.6■□□□□ 0.41
PRPF19-203ENST00000539180 ERCC3P19447 782 aa17.6■□□□□ 0.41
PRPF19-203ENST00000539180 OAZ1P54368 228 aa17.6■□□□□ 0.41
PRPF19-203ENST00000539180 IFIT1BQ5T764 474 aaKnown RBP17.6■□□□□ 0.41
PRPF19-203ENST00000539180 SAMD1Q6SPF0 538 aaPredicted RBP17.6■□□□□ 0.41
PRPF19-203ENST00000539180 CHURC1Q8WUH1 139 aa17.6■□□□□ 0.41
PRPF19-203ENST00000539180 CHMP4CQ96CF2 233 aa17.6■□□□□ 0.41
PRPF19-203ENST00000539180 ZNF333Q96JL9 665 aa17.6■□□□□ 0.41
PRPF19-203ENST00000539180 TEX13BQ9BXU2 312 aa17.6■□□□□ 0.41
PRPF19-203ENST00000539180 SENP2Q9HC62 589 aa17.6■□□□□ 0.41
PRPF19-203ENST00000539180 PRR12Q9ULL5 1215 aa17.6■□□□□ 0.41
PRPF19-203ENST00000539180 ZNF536O15090 1300 aa17.6■□□□□ 0.41
PRPF19-203ENST00000539180 FRMPD2Q68DX3 1309 aaPredicted RBP17.6■□□□□ 0.41
PRPF19-203ENST00000539180 MYH6P13533 1939 aa17.6■□□□□ 0.41
PRPF19-203ENST00000539180 FRMPD3Q5JV73 1810 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 SLC25A27O95847 323 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 PTPREP23469 700 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 SLC9C1Q4G0N8 1177 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 GPATCH4Q5T3I0 446 aaKnown RBP17.59■□□□□ 0.41
PRPF19-203ENST00000539180 TTBK2Q6IQ55 1244 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.59■□□□□ 0.41
PRPF19-203ENST00000539180 CHST3Q7LGC8 479 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 SLAIN1Q8ND83 568 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 RAET1EQ8TD07 263 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 IGDCC4Q8TDY8 1250 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 PXYLP1Q8TE99 480 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 RANBP17Q9H2T7 1088 aaKnown RBP17.59■□□□□ 0.41
PRPF19-203ENST00000539180 MROH8Q9H579 483 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 SMCHD1A6NHR9 2005 aa17.59■□□□□ 0.41
PRPF19-203ENST00000539180 LRRC37A2A6NM11 1700 aa17.58■□□□□ 0.41
PRPF19-203ENST00000539180 WDR19Q8NEZ3 1342 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 SLC15A5A6NIM6 579 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 SH2B2O14492 632 aaPredicted RBP17.58■□□□□ 0.4
PRPF19-203ENST00000539180 IFIT3O14879 490 aaKnown RBP17.58■□□□□ 0.4
PRPF19-203ENST00000539180 PRC1O43663 620 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 MCM5P33992 734 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 COPB2P35606 906 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 STAT3P40763 770 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 PLS1Q14651 629 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 SART3Q15020 963 aaKnown RBP17.58■□□□□ 0.4
PRPF19-203ENST00000539180 ADCK5Q3MIX3 580 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 SH3TC2Q8TF17 1288 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 APBA2Q99767 749 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 NUDT12Q9BQG2 462 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 LY9Q9HBG7 655 aa17.58■□□□□ 0.4
PRPF19-203ENST00000539180 ISY1Q9ULR0 285 aaKnown RBP17.58■□□□□ 0.4
PRPF19-203ENST00000539180 ADCY3O60266 1144 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 ZBED4O75132 1171 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 HOXC6P09630 235 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 XRCC5P13010 732 aaKnown RBP17.57■□□□□ 0.4
PRPF19-203ENST00000539180 GRK4P32298 578 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 MAP2K5Q13163 448 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 WTAPQ15007 396 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 ASPRV1Q53RT3 343 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 TMEM67Q5HYA8 995 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 SYDE2Q5VT97 1194 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 SNRNP48Q6IEG0 339 aaKnown RBP17.57■□□□□ 0.4
PRPF19-203ENST00000539180 ABRAQ8N0Z2 381 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 TMEM87BQ96K49 555 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 RAVER2Q9HCJ3 691 aaKnown RBP17.57■□□□□ 0.4
PRPF19-203ENST00000539180 GPCPD1Q9NPB8 672 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 RIPK3Q9Y572 518 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 SNX14Q9Y5W7 946 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 CENPFP49454 3210 aa17.57■□□□□ 0.4
PRPF19-203ENST00000539180 ERICH2A1L162 156 aa17.56■□□□□ 0.4
PRPF19-203ENST00000539180 IGHA2P01877 340 aa17.56■□□□□ 0.4
PRPF19-203ENST00000539180 ELNP15502 786 aa17.56■□□□□ 0.4
PRPF19-203ENST00000539180 ZKSCAN1P17029 563 aaPredicted RBP17.56■□□□□ 0.4
PRPF19-203ENST00000539180 SLC16A2P36021 539 aa17.56■□□□□ 0.4
PRPF19-203ENST00000539180 RGS2P41220 211 aa17.56■□□□□ 0.4
PRPF19-203ENST00000539180 TROAPQ12815 778 aa17.56■□□□□ 0.4
PRPF19-203ENST00000539180 IKQ13123 557 aaPredicted RBP17.56■□□□□ 0.4
PRPF19-203ENST00000539180 KRT32Q14532 448 aa17.56■□□□□ 0.4
PRPF19-203ENST00000539180 NCAPG2Q86XI2 1143 aa17.56■□□□□ 0.4
PRPF19-203ENST00000539180 CCAR1Q8IX12 1150 aaKnown RBP17.56■□□□□ 0.4
PRPF19-203ENST00000539180 TRIB2Q92519 343 aa17.56■□□□□ 0.4
PRPF19-203ENST00000539180 NEK1Q96PY6 1258 aa17.56■□□□□ 0.4
PRPF19-203ENST00000539180 GPHNQ9NQX3 736 aaPredicted RBP17.56■□□□□ 0.4
PRPF19-203ENST00000539180 STRNO43815 780 aa17.55■□□□□ 0.4
PRPF19-203ENST00000539180 GOLGA8HP0CJ92 632 aa17.55■□□□□ 0.4
PRPF19-203ENST00000539180 ADORA2AP29274 412 aa17.55■□□□□ 0.4
PRPF19-203ENST00000539180 LIFRP42702 1097 aa17.55■□□□□ 0.4
PRPF19-203ENST00000539180 GRM4Q14833 912 aa17.55■□□□□ 0.4
PRPF19-203ENST00000539180 WDR78Q5VTH9 848 aa17.55■□□□□ 0.4
PRPF19-203ENST00000539180 CPXCR1Q8N123 301 aa17.55■□□□□ 0.4
PRPF19-203ENST00000539180 USP26Q9BXU7 913 aa17.55■□□□□ 0.4
PRPF19-203ENST00000539180 IVNS1ABPQ9Y6Y0 642 aa17.55■□□□□ 0.4
PRPF19-203ENST00000539180 PALM3A6NDB9 673 aaPredicted RBP17.54■□□□□ 0.4
PRPF19-203ENST00000539180 HMGCRP04035 888 aa17.54■□□□□ 0.4
PRPF19-203ENST00000539180 ICAM1P05362 532 aa17.54■□□□□ 0.4
PRPF19-203ENST00000539180 PARP1P09874 1014 aaKnown RBP17.54■□□□□ 0.4
PRPF19-203ENST00000539180 CYP2B6P20813 491 aa17.54■□□□□ 0.4
PRPF19-203ENST00000539180 EXOSC10Q01780 885 aaKnown RBP17.54■□□□□ 0.4
PRPF19-203ENST00000539180 IFFO2Q5TF58 517 aa17.54■□□□□ 0.4
PRPF19-203ENST00000539180 SGMS1Q86VZ5 419 aa17.54■□□□□ 0.4
PRPF19-203ENST00000539180 STAG2Q8N3U4 1231 aa17.54■□□□□ 0.4
PRPF19-203ENST00000539180 CPVLQ9H3G5 476 aa17.54■□□□□ 0.4
PRPF19-203ENST00000539180 CWC22Q9HCG8 908 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms