RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 USP17L19D6RCP7 530 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 USP17L20D6RJB6 530 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 CYTH3O43739 400 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 DHX16O60231 1041 aaKnown RBP27.3■■□□□ 1.96
TMEM260-202ENST00000538838 FLOT1O75955 427 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 USP17L24Q0WX57 530 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 FUT2Q10981 343 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 CUL4AQ13619 759 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 BTNL9Q6UXG8 535 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 CATSPERGQ6ZRH7 1159 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 AOC2O75106 756 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 SYDE2Q5VT97 1194 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 PHKBQ93100 1093 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 KIFC2Q96AC6 838 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 PTPN18Q99952 460 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 SLF1Q9BQI6 1058 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 LZTS2Q9BRK4 669 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 THSD7BQ9C0I4 1608 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 TESPA1A2RU30 521 aaPredicted RBP27.29■■□□□ 1.96
TMEM260-202ENST00000538838 IFNAR1P17181 557 aa27.29■■□□□ 1.96
TMEM260-202ENST00000538838 HOXA7P31268 230 aaPredicted RBP27.29■■□□□ 1.96
TMEM260-202ENST00000538838 CPLX2Q6PUV4 134 aaKnown RBP27.29■■□□□ 1.96
TMEM260-202ENST00000538838 FAM160B2Q86V87 743 aa27.29■■□□□ 1.96
TMEM260-202ENST00000538838 ADGRF4Q8IZF3 695 aa27.29■■□□□ 1.96
TMEM260-202ENST00000538838 NSUN7Q8NE18 718 aaKnown RBP27.29■■□□□ 1.96
TMEM260-202ENST00000538838 CHURC1Q8WUH1 139 aa27.29■■□□□ 1.96
TMEM260-202ENST00000538838 SPZ1Q9BXG8 430 aa27.29■■□□□ 1.96
TMEM260-202ENST00000538838 PRR12Q9ULL5 1215 aa27.29■■□□□ 1.96
TMEM260-202ENST00000538838 JAK2O60674 1132 aa27.28■■□□□ 1.96
TMEM260-202ENST00000538838 PLA2G6O60733 806 aa27.28■■□□□ 1.96
TMEM260-202ENST00000538838 HSPA6P17066 643 aa27.28■■□□□ 1.96
TMEM260-202ENST00000538838 NOGQ13253 232 aa27.28■■□□□ 1.96
TMEM260-202ENST00000538838 ANKRD23Q86SG2 305 aa27.28■■□□□ 1.96
TMEM260-202ENST00000538838 FAM43AQ8N2R8 423 aa27.28■■□□□ 1.96
TMEM260-202ENST00000538838 VAT1LQ9HCJ6 419 aa27.28■■□□□ 1.96
TMEM260-202ENST00000538838 PTPDC1A2A3K4 754 aa27.27■■□□□ 1.96
TMEM260-202ENST00000538838 KIF23Q02241 960 aaPredicted RBP27.27■■□□□ 1.96
TMEM260-202ENST00000538838 PIBF1Q8WXW3 757 aa27.27■■□□□ 1.96
TMEM260-202ENST00000538838 RIOX1Q9H6W3 641 aa27.27■■□□□ 1.96
TMEM260-202ENST00000538838 FOXD4L1Q9NU39 408 aa27.27■■□□□ 1.96
TMEM260-202ENST00000538838 PPP1R9AQ9ULJ8 1098 aa27.27■■□□□ 1.96
TMEM260-202ENST00000538838 hCG_1642624A0A1W2PR95 340 aa27.27■■□□□ 1.96
TMEM260-202ENST00000538838 PDHXO00330 501 aa27.27■■□□□ 1.96
TMEM260-202ENST00000538838 IGF2BP3O00425 579 aaKnown RBP eCLIP27.27■■□□□ 1.96
TMEM260-202ENST00000538838 CDKL5O76039 1030 aa27.27■■□□□ 1.96
TMEM260-202ENST00000538838 IRX3P78415 501 aaPredicted RBP27.27■■□□□ 1.96
TMEM260-202ENST00000538838 PABPC4Q13310 644 aaKnown RBP eCLIP27.27■■□□□ 1.96
TMEM260-202ENST00000538838 SLC26A6Q9BXS9 759 aa27.27■■□□□ 1.96
TMEM260-202ENST00000538838 ASCC2Q9H1I8 757 aaPredicted RBP27.27■■□□□ 1.96
TMEM260-202ENST00000538838 JMJD4Q9H9V9 463 aa27.27■■□□□ 1.96
TMEM260-202ENST00000538838 SMARCA1P28370 1054 aa27.26■■□□□ 1.95
TMEM260-202ENST00000538838 SLC4A3P48751 1232 aa27.26■■□□□ 1.95
TMEM260-202ENST00000538838 SNAP25P60880 206 aa27.26■■□□□ 1.95
TMEM260-202ENST00000538838 SREBF2Q12772 1141 aa27.26■■□□□ 1.95
TMEM260-202ENST00000538838 PRPF38AQ8NAV1 312 aaKnown RBP27.26■■□□□ 1.95
TMEM260-202ENST00000538838 ATG4CQ96DT6 458 aa27.26■■□□□ 1.95
TMEM260-202ENST00000538838 WDR33Q9C0J8 1336 aaKnown RBP27.26■■□□□ 1.95
TMEM260-202ENST00000538838 VEGFBP49765 207 aa27.25■■□□□ 1.95
TMEM260-202ENST00000538838 COG2Q14746 738 aa27.25■■□□□ 1.95
TMEM260-202ENST00000538838 HOMER1Q86YM7 354 aa27.25■■□□□ 1.95
TMEM260-202ENST00000538838 LLPHQ9BRT6 129 aaKnown RBP27.25■■□□□ 1.95
TMEM260-202ENST00000538838 SPDYE16A6NNV3 312 aaPredicted RBP27.24■■□□□ 1.95
TMEM260-202ENST00000538838 FMNL1O95466 1100 aaPredicted RBP27.24■■□□□ 1.95
TMEM260-202ENST00000538838 OSBPP22059 807 aa27.24■■□□□ 1.95
TMEM260-202ENST00000538838 DSG3P32926 999 aa27.24■■□□□ 1.95
TMEM260-202ENST00000538838 SPRYD3Q8NCJ5 442 aa27.24■■□□□ 1.95
TMEM260-202ENST00000538838 DDX11Q96FC9 970 aa27.24■■□□□ 1.95
TMEM260-202ENST00000538838 PIGSQ96S52 555 aa27.24■■□□□ 1.95
TMEM260-202ENST00000538838 RNF26Q9BY78 433 aaPredicted RBP27.24■■□□□ 1.95
TMEM260-202ENST00000538838 SLC45A1Q9Y2W3 748 aa27.24■■□□□ 1.95
TMEM260-202ENST00000538838 SSRP1Q08945 709 aaKnown RBP27.23■■□□□ 1.95
TMEM260-202ENST00000538838 CDC37Q16543 378 aaPredicted RBP27.23■■□□□ 1.95
TMEM260-202ENST00000538838 SMARCC2Q8TAQ2 1214 aa27.23■■□□□ 1.95
TMEM260-202ENST00000538838 PNMA3Q9UL41 463 aa27.23■■□□□ 1.95
TMEM260-202ENST00000538838 V9GY48 417 aaPredicted RBP27.23■■□□□ 1.95
TMEM260-202ENST00000538838 MYPNQ86TC9 1320 aa27.23■■□□□ 1.95
TMEM260-202ENST00000538838 HSP90AA1P07900 732 aaKnown RBP27.23■■□□□ 1.95
TMEM260-202ENST00000538838 CYP2C8P10632 490 aa27.23■■□□□ 1.95
TMEM260-202ENST00000538838 INHBEP58166 350 aa27.23■■□□□ 1.95
TMEM260-202ENST00000538838 IFNL1Q8IU54 200 aa27.23■■□□□ 1.95
TMEM260-202ENST00000538838 TRIM22Q8IYM9 498 aa27.23■■□□□ 1.95
TMEM260-202ENST00000538838 MTMR8Q96EF0 704 aa27.23■■□□□ 1.95
TMEM260-202ENST00000538838 RRP36Q96EU6 259 aaKnown RBP27.23■■□□□ 1.95
TMEM260-202ENST00000538838 P2RX7Q99572 595 aaKnown RBP27.23■■□□□ 1.95
TMEM260-202ENST00000538838 RANBP17Q9H2T7 1088 aaKnown RBP27.23■■□□□ 1.95
TMEM260-202ENST00000538838 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.23■■□□□ 1.95
TMEM260-202ENST00000538838 HERVK_113P62684 666 aa27.22■■□□□ 1.95
TMEM260-202ENST00000538838 ORC3Q9UBD5 711 aaPredicted RBP27.22■■□□□ 1.95
TMEM260-202ENST00000538838 STK36Q9NRP7 1315 aa27.22■■□□□ 1.95
TMEM260-202ENST00000538838 SMCHD1A6NHR9 2005 aa27.21■■□□□ 1.95
TMEM260-202ENST00000538838 VWA5AO00534 786 aa27.21■■□□□ 1.95
TMEM260-202ENST00000538838 PRPF3O43395 683 aaKnown RBP27.21■■□□□ 1.95
TMEM260-202ENST00000538838 FDPSP14324 419 aaKnown RBP27.21■■□□□ 1.95
TMEM260-202ENST00000538838 TM4SF4P48230 202 aa27.21■■□□□ 1.95
TMEM260-202ENST00000538838 INTS4Q96HW7 963 aaKnown RBP27.21■■□□□ 1.95
TMEM260-202ENST00000538838 HOXC10Q9NYD6 342 aa27.21■■□□□ 1.95
TMEM260-202ENST00000538838 AKAP17AQ02040 695 aaKnown RBP27.2■■□□□ 1.95
TMEM260-202ENST00000538838 QRICH1Q2TAL8 776 aa27.2■■□□□ 1.95
TMEM260-202ENST00000538838 CCDC174Q6PII3 467 aa27.2■■□□□ 1.95
TMEM260-202ENST00000538838 POTEEQ6S8J3 1075 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms