RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 NBPF11Q86T75 865 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 HOMER1Q86YM7 354 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 ZNF280CQ8ND82 737 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 WASF1Q92558 559 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 CCDC102AQ96A19 550 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 GMCL1Q96IK5 515 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 ZIC5Q96T25 663 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 LZTS2Q9BRK4 669 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 ALG1Q9BT22 464 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 RNF26Q9BY78 433 aaPredicted RBP16.38■□□□□ 0.21
CD4-208ENST00000538827 UBA5Q9GZZ9 404 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
CD4-208ENST00000538827 USP17L10C9JJH3 530 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 H3BQV1 296 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 DEXIO95424 95 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 FDPSP14324 419 aaKnown RBP16.37■□□□□ 0.21
CD4-208ENST00000538827 PDCP20941 246 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 DDIT3P35638 169 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 SLC16A2P36021 539 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 USP14P54578 494 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 GUCY1B3Q02153 619 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 PKP1Q13835 747 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 MAP3K11Q16584 847 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 KIAA1755Q5JYT7 1200 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 C2orf69Q8N8R5 385 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 OTUD5Q96G74 571 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 C8orf76Q96K31 380 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 AIFM3Q96NN9 605 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 WDR18Q9BV38 432 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 SPZ1Q9BXG8 430 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 KIAA1683Q9H0B3 1180 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 VAT1LQ9HCJ6 419 aa16.37■□□□□ 0.21
CD4-208ENST00000538827 TMEM232C9JQI7 657 aa16.36■□□□□ 0.21
CD4-208ENST00000538827 PRPF3O43395 683 aaKnown RBP16.36■□□□□ 0.21
CD4-208ENST00000538827 SYT1P21579 422 aa16.36■□□□□ 0.21
CD4-208ENST00000538827 NUCB2P80303 420 aa16.36■□□□□ 0.21
CD4-208ENST00000538827 FUT2Q10981 343 aa16.36■□□□□ 0.21
CD4-208ENST00000538827 TRIM29Q14134 588 aa16.36■□□□□ 0.21
CD4-208ENST00000538827 RGMBQ6NW40 437 aa16.36■□□□□ 0.21
CD4-208ENST00000538827 RRP36Q96EU6 259 aaKnown RBP16.36■□□□□ 0.21
CD4-208ENST00000538827 RNF186Q9NXI6 227 aa16.36■□□□□ 0.21
CD4-208ENST00000538827 TMOD4Q9NZQ9 345 aa16.36■□□□□ 0.21
CD4-208ENST00000538827 SEC63Q9UGP8 760 aaKnown RBP16.36■□□□□ 0.21
CD4-208ENST00000538827 V9GY48 417 aaPredicted RBP16.36■□□□□ 0.21
CD4-208ENST00000538827 MYH15Q9Y2K3 1946 aa16.36■□□□□ 0.21
CD4-208ENST00000538827 PARP14Q460N5 1801 aa16.35■□□□□ 0.21
CD4-208ENST00000538827 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
CD4-208ENST00000538827 WDR46O15213 610 aaKnown RBP16.35■□□□□ 0.21
CD4-208ENST00000538827 STX6O43752 255 aa16.35■□□□□ 0.21
CD4-208ENST00000538827 TRPA1O75762 1119 aa16.35■□□□□ 0.21
CD4-208ENST00000538827 HMGCS2P54868 508 aa16.35■□□□□ 0.21
CD4-208ENST00000538827 SLC35G1Q2M3R5 365 aa16.35■□□□□ 0.21
CD4-208ENST00000538827 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
CD4-208ENST00000538827 TANGO6Q9C0B7 1094 aa16.35■□□□□ 0.21
CD4-208ENST00000538827 RBM27Q9P2N5 1060 aaKnown RBP16.35■□□□□ 0.21
CD4-208ENST00000538827 FAM155AB1AL88 458 aaPredicted RBP16.34■□□□□ 0.21
CD4-208ENST00000538827 CYTH3O43739 400 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 VCAM1P19320 739 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 STAT2P52630 851 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 BACE1P56817 501 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 FKBP1BP68106 108 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
CD4-208ENST00000538827 SYDE2Q5VT97 1194 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 HEATR3Q7Z4Q2 680 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 ERO1BQ86YB8 467 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 ADGRF4Q8IZF3 695 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 LPAR1Q92633 364 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 GPKOWQ92917 476 aaPredicted RBP eCLIP16.34■□□□□ 0.21
CD4-208ENST00000538827 OPTNQ96CV9 577 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 PIGSQ96S52 555 aa16.34■□□□□ 0.21
CD4-208ENST00000538827 SCG2P13521 617 aa16.33■□□□□ 0.2
CD4-208ENST00000538827 PPATQ06203 517 aa16.33■□□□□ 0.2
CD4-208ENST00000538827 PPIL2Q13356 520 aa16.33■□□□□ 0.2
CD4-208ENST00000538827 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.2
CD4-208ENST00000538827 GADL1Q6ZQY3 521 aa16.33■□□□□ 0.2
CD4-208ENST00000538827 KIFC2Q96AC6 838 aa16.33■□□□□ 0.2
CD4-208ENST00000538827 RPAP3Q9H6T3 665 aaPredicted RBP16.33■□□□□ 0.2
CD4-208ENST00000538827 GJB4Q9NTQ9 266 aa16.33■□□□□ 0.2
CD4-208ENST00000538827 VPS54Q9P1Q0 977 aa16.33■□□□□ 0.2
CD4-208ENST00000538827 MTMR6Q9Y217 621 aa16.33■□□□□ 0.2
CD4-208ENST00000538827 AFG3L2Q9Y4W6 797 aa16.33■□□□□ 0.2
CD4-208ENST00000538827 C19orf81C9J6K1 198 aa16.32■□□□□ 0.2
CD4-208ENST00000538827 XBP1P17861 261 aa16.32■□□□□ 0.2
CD4-208ENST00000538827 SNAP25P60880 206 aa16.32■□□□□ 0.2
CD4-208ENST00000538827 PKN1Q16512 942 aa16.32■□□□□ 0.2
CD4-208ENST00000538827 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
CD4-208ENST00000538827 PFKFB3Q16875 520 aaPredicted RBP16.32■□□□□ 0.2
CD4-208ENST00000538827 LDLRAD1Q5T700 205 aa16.32■□□□□ 0.2
CD4-208ENST00000538827 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
CD4-208ENST00000538827 FAM160B2Q86V87 743 aa16.32■□□□□ 0.2
CD4-208ENST00000538827 SLC10A4Q96EP9 437 aa16.32■□□□□ 0.2
CD4-208ENST00000538827 RIOX1Q9H6W3 641 aa16.32■□□□□ 0.2
CD4-208ENST00000538827 JMJD4Q9H9V9 463 aa16.32■□□□□ 0.2
CD4-208ENST00000538827 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
CD4-208ENST00000538827 BRD1O95696 1058 aa16.31■□□□□ 0.2
CD4-208ENST00000538827 ZSCAN22P10073 491 aaPredicted RBP16.31■□□□□ 0.2
CD4-208ENST00000538827 SMARCA1P28370 1054 aa16.31■□□□□ 0.2
CD4-208ENST00000538827 MKRN3Q13064 507 aaKnown RBP16.31■□□□□ 0.2
CD4-208ENST00000538827 GNL2Q13823 731 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms