RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 USP49Q70CQ1 688 aa16.89■□□□□ 0.29
ATL3-203ENST00000538786 AOPEPQ8N6M6 819 aa16.89■□□□□ 0.29
ATL3-203ENST00000538786 RASGRP4Q8TDF6 673 aa16.89■□□□□ 0.29
ATL3-203ENST00000538786 TRIM5Q9C035 493 aa16.89■□□□□ 0.29
ATL3-203ENST00000538786 SERTAD1Q9UHV2 236 aa16.89■□□□□ 0.29
ATL3-203ENST00000538786 GREB1LQ9C091 1923 aaPredicted RBP16.89■□□□□ 0.29
ATL3-203ENST00000538786 ACTN4O43707 911 aaKnown RBP16.88■□□□□ 0.29
ATL3-203ENST00000538786 POSTNQ15063 836 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 GPATCH4Q5T3I0 446 aaKnown RBP16.88■□□□□ 0.29
ATL3-203ENST00000538786 GMLQ99445 158 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 KANSL2Q9H9L4 492 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 BAZ2BQ9UIF8 2168 aaKnown RBP16.88■□□□□ 0.29
ATL3-203ENST00000538786 VWA3AA6NCI4 1184 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 SMCO2A6NFE2 343 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 SPDYE2BA6NHP3 402 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 GOLGA6L6A8MZA4 724 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 PSMD14O00487 310 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 RAD17O75943 681 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 SPDYE6P0CI01 402 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 SLURP2P0DP57 97 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 KRT25Q7Z3Z0 450 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.88■□□□□ 0.29
ATL3-203ENST00000538786 SYMPKQ92797 1274 aaKnown RBP16.88■□□□□ 0.29
ATL3-203ENST00000538786 MKL1Q969V6 931 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 CCDC34Q96HJ3 373 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 EPSTI1Q96J88 318 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 PIM2Q9P1W9 311 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 NYAP2Q9P242 653 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 HDAC9Q9UKV0 1011 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 PCDHA5Q9Y5H7 936 aa16.88■□□□□ 0.29
ATL3-203ENST00000538786 SIPA1L1O43166 1804 aa16.87■□□□□ 0.29
ATL3-203ENST00000538786 FAM196BA6NMK8 535 aa16.87■□□□□ 0.29
ATL3-203ENST00000538786 TPM3P06753 285 aa16.87■□□□□ 0.29
ATL3-203ENST00000538786 ATP2B2Q01814 1243 aa16.87■□□□□ 0.29
ATL3-203ENST00000538786 PDILTQ8N807 584 aa16.87■□□□□ 0.29
ATL3-203ENST00000538786 C4orf32Q8N8J7 132 aa16.87■□□□□ 0.29
ATL3-203ENST00000538786 GPCPD1Q9NPB8 672 aa16.87■□□□□ 0.29
ATL3-203ENST00000538786 TMOD2Q9NZR1 351 aa16.87■□□□□ 0.29
ATL3-203ENST00000538786 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.87■□□□□ 0.29
ATL3-203ENST00000538786 MYH8P13535 1937 aa16.87■□□□□ 0.29
ATL3-203ENST00000538786 KIF13BQ9NQT8 1826 aa16.87■□□□□ 0.29
ATL3-203ENST00000538786 FOXN1O15353 648 aa16.86■□□□□ 0.29
ATL3-203ENST00000538786 NT5DC1Q5TFE4 455 aa16.86■□□□□ 0.29
ATL3-203ENST00000538786 TMEM179Q6ZVK1 233 aa16.86■□□□□ 0.29
ATL3-203ENST00000538786 OGFOD1Q8N543 542 aa16.86■□□□□ 0.29
ATL3-203ENST00000538786 ZNRF3Q9ULT6 936 aa16.86■□□□□ 0.29
ATL3-203ENST00000538786 COL4A5P29400 1685 aa16.86■□□□□ 0.29
ATL3-203ENST00000538786 PSME4Q14997 1843 aa16.86■□□□□ 0.29
ATL3-203ENST00000538786 PNMA6FA0A0J9YX94 578 aa16.86■□□□□ 0.29
ATL3-203ENST00000538786 SLFN14P0C7P3 912 aa16.86■□□□□ 0.29
ATL3-203ENST00000538786 EEF2P13639 858 aaKnown RBP16.86■□□□□ 0.29
ATL3-203ENST00000538786 LONP1P36776 959 aaKnown RBP16.86■□□□□ 0.29
ATL3-203ENST00000538786 NONOQ15233 471 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATL3-203ENST00000538786 INF2Q27J81 1249 aa16.86■□□□□ 0.29
ATL3-203ENST00000538786 PYM1Q9BRP8 204 aaKnown RBP16.86■□□□□ 0.29
ATL3-203ENST00000538786 JMJD4Q9H9V9 463 aa16.86■□□□□ 0.29
ATL3-203ENST00000538786 A0A087X0B3 334 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 LAD1O00515 517 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 IKBKBO14920 756 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 ZNF500O60304 480 aaPredicted RBP16.85■□□□□ 0.29
ATL3-203ENST00000538786 ZBTB7AO95365 584 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 POLD1P28340 1107 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 CDC25BP30305 580 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 SARSP49591 514 aaKnown RBP16.85■□□□□ 0.29
ATL3-203ENST00000538786 DLGAP5Q15398 846 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 IL17AQ16552 155 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 CCDC96Q2M329 555 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 ABCB5Q2M3G0 1257 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 ISM2Q6H9L7 571 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 NIM1KQ8IY84 436 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 ADGRF4Q8IZF3 695 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 DHX58Q96C10 678 aa16.85■□□□□ 0.29
ATL3-203ENST00000538786 SMTNL1A8MU46 457 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 PRR29P0C7W0 189 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 PPP1R18Q6NYC8 613 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 REXO1Q8N1G1 1221 aaKnown RBP16.84■□□□□ 0.29
ATL3-203ENST00000538786 SPATA20Q8TB22 786 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 DCAF4Q8WV16 495 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 SMARCE1Q969G3 411 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 MRFAP1L1Q96HT8 127 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 CSRNP1Q96S65 589 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 TPM4P67936 248 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 ICA1Q05084 483 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 SEPT2Q15019 361 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 TRIML1Q8N9V2 468 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 SPC24Q8NBT2 197 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 AGBL3Q8NEM8 1001 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 MTFR1LQ9H019 292 aa16.84■□□□□ 0.29
ATL3-203ENST00000538786 ZNF70Q9UC06 446 aaPredicted RBP16.84■□□□□ 0.29
ATL3-203ENST00000538786 HERC5Q9UII4 1024 aaKnown RBP16.84■□□□□ 0.29
ATL3-203ENST00000538786 SMC2O95347 1197 aa16.83■□□□□ 0.28
ATL3-203ENST00000538786 PRPHP41219 470 aa16.83■□□□□ 0.28
ATL3-203ENST00000538786 SHROOM1Q2M3G4 852 aaPredicted RBP16.83■□□□□ 0.28
ATL3-203ENST00000538786 DALRD3Q5D0E6 543 aaKnown RBP16.83■□□□□ 0.28
ATL3-203ENST00000538786 TTBK2Q6IQ55 1244 aa16.83■□□□□ 0.28
ATL3-203ENST00000538786 KCTD1Q719H9 257 aa16.83■□□□□ 0.28
ATL3-203ENST00000538786 SH3RF1Q7Z6J0 888 aa16.83■□□□□ 0.28
ATL3-203ENST00000538786 SIAH1Q8IUQ4 282 aa16.83■□□□□ 0.28
ATL3-203ENST00000538786 MTMR8Q96EF0 704 aa16.83■□□□□ 0.28
ATL3-203ENST00000538786 MAN1B1Q9UKM7 699 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms