RNA–Protein interactions for RNA: ENST00000538354.5

TULP3-203, Transcript of tubby like protein 3, humanhuman

TSL 1 (best)

Gene TULP3, Length 1,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-203ENST00000538354 LAMA3Q16787 3333 aa23.21■■□□□ 1.31
TULP3-203ENST00000538354 TAL1P17542 331 aaPredicted RBP23.2■■□□□ 1.3
TULP3-203ENST00000538354 KCTD2Q14681 263 aa23.2■■□□□ 1.3
TULP3-203ENST00000538354 FAM47AQ5JRC9 791 aa23.2■■□□□ 1.3
TULP3-203ENST00000538354 TTC22Q5TAA0 569 aa23.2■■□□□ 1.3
TULP3-203ENST00000538354 RIPK3Q9Y572 518 aa23.2■■□□□ 1.3
TULP3-203ENST00000538354 SDSP20132 328 aa23.19■■□□□ 1.3
TULP3-203ENST00000538354 RTP1P59025 263 aa23.19■■□□□ 1.3
TULP3-203ENST00000538354 ZNF792Q3KQV3 632 aa23.19■■□□□ 1.3
TULP3-203ENST00000538354 MCMDC2Q4G0Z9 681 aa23.19■■□□□ 1.3
TULP3-203ENST00000538354 SNRNP48Q6IEG0 339 aaKnown RBP23.19■■□□□ 1.3
TULP3-203ENST00000538354 TDHQ8IZJ6 230 aa23.19■■□□□ 1.3
TULP3-203ENST00000538354 FAM227BQ96M60 508 aa23.19■■□□□ 1.3
TULP3-203ENST00000538354 ATP11BQ9Y2G3 1177 aa23.19■■□□□ 1.3
TULP3-203ENST00000538354 A0A0D9SFI3 127 aa23.18■■□□□ 1.3
TULP3-203ENST00000538354 GSPT1P15170 499 aaKnown RBP23.18■■□□□ 1.3
TULP3-203ENST00000538354 CPXCR1Q8N123 301 aa23.18■■□□□ 1.3
TULP3-203ENST00000538354 ARRDC4Q8NCT1 418 aa23.18■■□□□ 1.3
TULP3-203ENST00000538354 FERMT2Q96AC1 680 aa23.18■■□□□ 1.3
TULP3-203ENST00000538354 LENG1Q96BZ8 264 aaPredicted RBP23.18■■□□□ 1.3
TULP3-203ENST00000538354 CCDC136Q96JN2 1154 aa23.18■■□□□ 1.3
TULP3-203ENST00000538354 TINF2Q9BSI4 451 aa23.18■■□□□ 1.3
TULP3-203ENST00000538354 NACAP1Q9BZK3 213 aa23.18■■□□□ 1.3
TULP3-203ENST00000538354 NAPBQ9H115 298 aa23.18■■□□□ 1.3
TULP3-203ENST00000538354 MTMR4Q9NYA4 1195 aa23.18■■□□□ 1.3
TULP3-203ENST00000538354 KBTBD13C9JR72 458 aa23.17■■□□□ 1.3
TULP3-203ENST00000538354 HIP1O00291 1037 aa23.17■■□□□ 1.3
TULP3-203ENST00000538354 PPARAQ07869 468 aa23.17■■□□□ 1.3
TULP3-203ENST00000538354 NMIQ13287 307 aaPredicted RBP23.17■■□□□ 1.3
TULP3-203ENST00000538354 LRRC41Q15345 812 aa23.17■■□□□ 1.3
TULP3-203ENST00000538354 KIFC2Q96AC6 838 aa23.17■■□□□ 1.3
TULP3-203ENST00000538354 INCENPQ9NQS7 918 aa23.17■■□□□ 1.3
TULP3-203ENST00000538354 FOXP2O15409 715 aa23.16■■□□□ 1.3
TULP3-203ENST00000538354 TSPY3P0CV98 308 aa23.16■■□□□ 1.3
TULP3-203ENST00000538354 TSPY8P0CW00 308 aa23.16■■□□□ 1.3
TULP3-203ENST00000538354 ADCYAP1R1P41586 468 aa23.16■■□□□ 1.3
TULP3-203ENST00000538354 ERICH6BQ5W0A0 696 aa23.16■■□□□ 1.3
TULP3-203ENST00000538354 TEX13BQ9BXU2 312 aa23.16■■□□□ 1.3
TULP3-203ENST00000538354 ZNF287Q9HBT7 754 aa23.16■■□□□ 1.3
TULP3-203ENST00000538354 RAVER2Q9HCJ3 691 aaKnown RBP23.16■■□□□ 1.3
TULP3-203ENST00000538354 TFAP4Q01664 338 aa23.15■■□□□ 1.3
TULP3-203ENST00000538354 CTDSPL2Q05D32 466 aa23.15■■□□□ 1.3
TULP3-203ENST00000538354 SLC39A5Q6ZMH5 540 aa23.15■■□□□ 1.3
TULP3-203ENST00000538354 Q7L0L9 218 aa23.15■■□□□ 1.3
TULP3-203ENST00000538354 PRPF38AQ8NAV1 312 aaKnown RBP23.15■■□□□ 1.3
TULP3-203ENST00000538354 NEDD1Q8NHV4 660 aa23.15■■□□□ 1.3
TULP3-203ENST00000538354 MKL1Q969V6 931 aa23.15■■□□□ 1.3
TULP3-203ENST00000538354 ISY1Q9ULR0 285 aaKnown RBP23.15■■□□□ 1.3
TULP3-203ENST00000538354 LTBP2Q14767 1821 aa23.15■■□□□ 1.3
TULP3-203ENST00000538354 ZBED4O75132 1171 aa23.14■■□□□ 1.29
TULP3-203ENST00000538354 TTLL1O95922 423 aa23.14■■□□□ 1.29
TULP3-203ENST00000538354 PGK1P00558 417 aa23.14■■□□□ 1.29
TULP3-203ENST00000538354 COPB2P35606 906 aa23.14■■□□□ 1.29
TULP3-203ENST00000538354 PDE4BQ07343 736 aa23.14■■□□□ 1.29
TULP3-203ENST00000538354 TRIM60Q495X7 471 aa23.14■■□□□ 1.29
TULP3-203ENST00000538354 VPS53Q5VIR6 699 aa23.14■■□□□ 1.29
TULP3-203ENST00000538354 SLFN13Q68D06 897 aa23.14■■□□□ 1.29
TULP3-203ENST00000538354 DIAPH3Q9NSV4 1193 aa23.14■■□□□ 1.29
TULP3-203ENST00000538354 DIS3Q9Y2L1 958 aaKnown RBP23.14■■□□□ 1.29
TULP3-203ENST00000538354 CTDP1Q9Y5B0 961 aaPredicted RBP23.14■■□□□ 1.29
TULP3-203ENST00000538354 TACC3Q9Y6A5 838 aa23.14■■□□□ 1.29
TULP3-203ENST00000538354 PLIN4Q96Q06 1357 aa23.14■■□□□ 1.29
TULP3-203ENST00000538354 MCM3APO60318 1980 aa23.13■■□□□ 1.29
TULP3-203ENST00000538354 ZNF865P0CJ78 1059 aaPredicted RBP23.13■■□□□ 1.29
TULP3-203ENST00000538354 RASGRP2Q7LDG7 609 aa23.13■■□□□ 1.29
TULP3-203ENST00000538354 DDX11Q96FC9 970 aa23.13■■□□□ 1.29
TULP3-203ENST00000538354 XPNPEP3Q9NQH7 507 aa23.13■■□□□ 1.29
TULP3-203ENST00000538354 PRDM5Q9NQX1 630 aaPredicted RBP23.13■■□□□ 1.29
TULP3-203ENST00000538354 CCDC171Q6TFL3 1326 aa23.12■■□□□ 1.29
TULP3-203ENST00000538354 SLC3A2P08195 630 aaKnown RBP23.12■■□□□ 1.29
TULP3-203ENST00000538354 RARBP10826 455 aa23.12■■□□□ 1.29
TULP3-203ENST00000538354 MFAP1P55081 439 aaKnown RBP23.12■■□□□ 1.29
TULP3-203ENST00000538354 ALX1Q15699 326 aa23.12■■□□□ 1.29
TULP3-203ENST00000538354 LRIT3Q3SXY7 679 aa23.12■■□□□ 1.29
TULP3-203ENST00000538354 ZNF589Q86UQ0 364 aaPredicted RBP23.12■■□□□ 1.29
TULP3-203ENST00000538354 GMCL1P1Q8NEA9 526 aa23.12■■□□□ 1.29
TULP3-203ENST00000538354 LBHD1Q9BQE6 289 aaPredicted RBP23.12■■□□□ 1.29
TULP3-203ENST00000538354 SLC38A10Q9HBR0 1119 aa23.12■■□□□ 1.29
TULP3-203ENST00000538354 FEM1BQ9UK73 627 aa23.12■■□□□ 1.29
TULP3-203ENST00000538354 TMEM232C9JQI7 657 aa23.11■■□□□ 1.29
TULP3-203ENST00000538354 NMT2O60551 498 aa23.11■■□□□ 1.29
TULP3-203ENST00000538354 BMP3P12645 472 aa23.11■■□□□ 1.29
TULP3-203ENST00000538354 CWC27Q6UX04 472 aaKnown RBP23.11■■□□□ 1.29
TULP3-203ENST00000538354 HOMER2Q9NSB8 354 aa23.11■■□□□ 1.29
TULP3-203ENST00000538354 PRKAG2Q9UGJ0 569 aa23.11■■□□□ 1.29
TULP3-203ENST00000538354 NRBP1Q9UHY1 535 aa23.11■■□□□ 1.29
TULP3-203ENST00000538354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.11■■□□□ 1.29
TULP3-203ENST00000538354 SNAI1O95863 264 aaPredicted RBP23.1■■□□□ 1.29
TULP3-203ENST00000538354 SH3RF1Q7Z6J0 888 aa23.1■■□□□ 1.29
TULP3-203ENST00000538354 DEFB123Q8N688 67 aa23.1■■□□□ 1.29
TULP3-203ENST00000538354 ZHX1Q9UKY1 873 aaPredicted RBP23.1■■□□□ 1.29
TULP3-203ENST00000538354 MTMR7Q9Y216 660 aa23.1■■□□□ 1.29
TULP3-203ENST00000538354 CNPY2Q9Y2B0 182 aa23.1■■□□□ 1.29
TULP3-203ENST00000538354 DNAJC25-GNG10A0A024R161 153 aa23.09■■□□□ 1.29
TULP3-203ENST00000538354 ATP2A1O14983 1001 aa23.09■■□□□ 1.29
TULP3-203ENST00000538354 HSPD1P10809 573 aaKnown RBP23.09■■□□□ 1.29
TULP3-203ENST00000538354 AKR1A1P14550 325 aa23.09■■□□□ 1.29
TULP3-203ENST00000538354 MCCP23508 829 aa23.09■■□□□ 1.29
TULP3-203ENST00000538354 SNAP25P60880 206 aa23.09■■□□□ 1.29
TULP3-203ENST00000538354 SNX17Q15036 470 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms