RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 FOCADQ5VW36 1801 aa12.95□□□□□ -0.34
SLC28A1-204ENST00000538177 PPP1R3GB7ZBB8 358 aa12.95□□□□□ -0.34
SLC28A1-204ENST00000538177 LAD1O00515 517 aa12.95□□□□□ -0.34
SLC28A1-204ENST00000538177 CTIFO43310 598 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-204ENST00000538177 INF2Q27J81 1249 aa12.95□□□□□ -0.34
SLC28A1-204ENST00000538177 DPP8Q6V1X1 898 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-204ENST00000538177 RASGRP2Q7LDG7 609 aa12.95□□□□□ -0.34
SLC28A1-204ENST00000538177 RRP36Q96EU6 259 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-204ENST00000538177 SAMSN1Q9NSI8 373 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-204ENST00000538177 TRMT1Q9NXH9 659 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-204ENST00000538177 MTMR4Q9NYA4 1195 aa12.95□□□□□ -0.34
SLC28A1-204ENST00000538177 IGKV6D-41A0A0C4DH26 115 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 KIF2AO00139 706 aaPredicted RBP12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 TXLNAP40222 546 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 PRPHP41219 470 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 HHIPL2Q6UWX4 724 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 DTHD1Q6ZMT9 781 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 KRT25Q7Z3Z0 450 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 MASTLQ96GX5 879 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 MAP7D2Q96T17 732 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 TMEM60Q9H2L4 133 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 CPVLQ9H3G5 476 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 RIOX1Q9H6W3 641 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 DDX4Q9NQI0 724 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 TTF2Q9UNY4 1162 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 MYO3BQ8WXR4 1341 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 EP400Q96L91 3159 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 QSER1Q2KHR3 1735 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 ESYT2A0FGR8 921 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 USP17L5A8MUK1 530 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 GNA11P29992 359 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 NAPAP54920 295 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 NR1I3Q14994 352 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 MTERF4Q7Z6M4 381 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 PDCL3Q9H2J4 239 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 C6orf50Q9HD87 102 aa12.94□□□□□ -0.34
SLC28A1-204ENST00000538177 A0A1B0GTH6 734 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 SMCO2A6NFE2 343 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 MMP10P09238 476 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 SNHG28P0DPA3 235 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 PDHBP11177 359 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 PICALMQ13492 652 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 HSP90AA4PQ58FG1 418 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 CDKAL1Q5VV42 579 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 APTXQ7Z2E3 356 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 TSC1Q92574 1164 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 STAMQ92783 540 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 CCSER1Q9C0I3 900 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 USP40Q9NVE5 1235 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 SEC63Q9UGP8 760 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 SWAP70Q9UH65 585 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 hCG_1984214I3L0E3 225 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 AKR1B1P15121 316 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 NONOQ15233 471 aaKnown RBP eCLIP12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 ASPRV1Q53RT3 343 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 SPECC1LQ69YQ0 1117 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 ZNF713Q8N859 430 aaPredicted RBP12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 PPP1R13BQ96KQ4 1090 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 PIGSQ96S52 555 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 BLZF1Q9H2G9 400 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 DISC1Q9NRI5 854 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 SERPINB13Q9UIV8 391 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 PARP3Q9Y6F1 533 aa12.93□□□□□ -0.34
SLC28A1-204ENST00000538177 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 APBA3O96018 575 aa12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 CDC25AP30304 524 aa12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 KARSQ15046 597 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 NAALADL2Q58DX5 795 aa12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 KLHL10Q6JEL2 608 aa12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 APOBEC3HQ6NTF7 200 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 CDC42EP5Q6NZY7 148 aa12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 MXD3Q9BW11 206 aa12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 RMND1Q9NWS8 449 aa12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 C10orf71Q711Q0 1435 aa12.92□□□□□ -0.34
SLC28A1-204ENST00000538177 CCP110O43303 1012 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 TUBB4AP04350 444 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 STAT6P42226 847 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 STX17P56962 302 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 ORC2Q13416 577 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 SOGA3Q5TF21 947 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 PODNQ7Z5L7 613 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 FCHSD1Q86WN1 690 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 TMEM139Q8IV31 216 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 SMYD4Q8IYR2 804 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 ZNF710Q8N1W2 664 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 TEKT1Q969V4 418 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 MRIQ9BWK5 157 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 UBA5Q9GZZ9 404 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 RPN1P04843 607 aaKnown RBP12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 MYL1P05976 194 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 SHMT1P34896 483 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 UBA7P41226 1012 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 SCNN1DP51172 638 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 SEMA3FQ13275 785 aa12.91□□□□□ -0.34
SLC28A1-204ENST00000538177 SYCP1Q15431 976 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms