RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 CASQ1P31415 396 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 UBE2SQ16763 222 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 ARHGAP29Q52LW3 1261 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 ENOX1Q8TC92 643 aaKnown RBP9.83□□□□□ -0.84
UBE3B-208ENST00000538070 UBXN4Q92575 508 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 RRP36Q96EU6 259 aaKnown RBP9.83□□□□□ -0.84
UBE3B-208ENST00000538070 CDK5RAP3Q96JB5 506 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 ZHX1Q9UKY1 873 aaPredicted RBP9.83□□□□□ -0.84
UBE3B-208ENST00000538070 HSPA1LP34931 641 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 ATP2C1P98194 919 aaPredicted RBP9.83□□□□□ -0.84
UBE3B-208ENST00000538070 NYAP1Q6ZVC0 841 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 TBC1D16Q8TBP0 767 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 TRIM34Q9BYJ4 488 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 TCP11L1Q9NUJ3 509 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 PUF60Q9UHX1 559 aaKnown RBP9.83□□□□□ -0.84
UBE3B-208ENST00000538070 PCDHAC2Q9Y5I4 1007 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 ZSCAN12O43309 604 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 RPN1P04843 607 aaKnown RBP9.83□□□□□ -0.84
UBE3B-208ENST00000538070 ENOX2Q16206 610 aaKnown RBP9.83□□□□□ -0.84
UBE3B-208ENST00000538070 SLC35G1Q2M3R5 365 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 SPATA1Q5VX52 437 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 WDR24Q96S15 920 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 PCDHA6Q9UN73 950 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 PCDHA8Q9Y5H6 950 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 BMP15O95972 392 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 AKR1B1P15121 316 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 ETF1P62495 437 aaKnown RBP9.82□□□□□ -0.84
UBE3B-208ENST00000538070 PAK1Q13153 545 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 TTBK2Q6IQ55 1244 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 ZNF579Q8NAF0 562 aaKnown RBP9.82□□□□□ -0.84
UBE3B-208ENST00000538070 ACRBPQ8NEB7 543 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 TBCKQ8TEA7 893 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 SRRTQ9BXP5 876 aaKnown RBP9.82□□□□□ -0.84
UBE3B-208ENST00000538070 POLD4Q9HCU8 107 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 TBC1D7Q9P0N9 293 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 COL16A1Q07092 1604 aaPredicted RBP9.82□□□□□ -0.84
UBE3B-208ENST00000538070 FLT1P17948 1338 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 TFRCP02786 760 aaKnown RBP9.82□□□□□ -0.84
UBE3B-208ENST00000538070 PRCPP42785 496 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 GNAQP50148 359 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 DDR1Q08345 913 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 SHROOM1Q2M3G4 852 aaPredicted RBP9.82□□□□□ -0.84
UBE3B-208ENST00000538070 TRMT1LQ7Z2T5 733 aaKnown RBP9.82□□□□□ -0.84
UBE3B-208ENST00000538070 DGKHQ86XP1 1220 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 CCDC148Q8NFR7 591 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 UBE2Q2Q8WVN8 375 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 RTFDC1Q9BY42 306 aaPredicted RBP9.82□□□□□ -0.84
UBE3B-208ENST00000538070 ZNF287Q9HBT7 754 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 TFR2Q9UP52 801 aa9.82□□□□□ -0.84
UBE3B-208ENST00000538070 TAL1P17542 331 aaPredicted RBP9.81□□□□□ -0.84
UBE3B-208ENST00000538070 GTF2F1P35269 517 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBE3B-208ENST00000538070 KRT31Q15323 416 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 TC2NQ8N9U0 490 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 MTRQ99707 1265 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 SLF1Q9BQI6 1058 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 C6orf50Q9HD87 102 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 MAGEC2Q9UBF1 373 aaPredicted RBP9.81□□□□□ -0.84
UBE3B-208ENST00000538070 BCL9LQ86UU0 1499 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 ARHGAP6O43182 974 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 ATP2B4P23634 1241 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 PDE4DQ08499 809 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 TXNRD1Q16881 649 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 SBK1Q52WX2 424 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 ZNF569Q5MCW4 686 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 CABP7Q86V35 215 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 SLC39A2Q9NP94 309 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 CICQ96RK0 1608 aaPredicted RBP9.81□□□□□ -0.84
UBE3B-208ENST00000538070 PHLPP1O60346 1717 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 KCNJ18B7U540 433 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 PPP1R3GB7ZBB8 358 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 PPEF1O14829 653 aaPredicted RBP9.81□□□□□ -0.84
UBE3B-208ENST00000538070 PLCG1P19174 1290 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 SARSP49591 514 aaKnown RBP9.81□□□□□ -0.84
UBE3B-208ENST00000538070 CACNB1Q02641 598 aaPredicted RBP9.81□□□□□ -0.84
UBE3B-208ENST00000538070 KCNJ12Q14500 433 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 GRM4Q14833 912 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 NONOQ15233 471 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBE3B-208ENST00000538070 KIF4BQ2VIQ3 1234 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 FBXO38Q6PIJ6 1188 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 HINFPQ9BQA5 517 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 DAGLAQ9Y4D2 1042 aa9.81□□□□□ -0.84
UBE3B-208ENST00000538070 KRT9P35527 623 aa9.8□□□□□ -0.84
UBE3B-208ENST00000538070 MTIF2P46199 727 aaKnown RBP9.8□□□□□ -0.84
UBE3B-208ENST00000538070 FXR1P51114 621 aaKnown RBP eCLIP9.8□□□□□ -0.84
UBE3B-208ENST00000538070 TSR1Q2NL82 804 aaKnown RBP9.8□□□□□ -0.84
UBE3B-208ENST00000538070 POTEDQ86YR6 584 aa9.8□□□□□ -0.84
UBE3B-208ENST00000538070 ZFP91Q96JP5 570 aaPredicted RBP9.8□□□□□ -0.84
UBE3B-208ENST00000538070 GSDMAQ96QA5 445 aa9.8□□□□□ -0.84
UBE3B-208ENST00000538070 MTA3Q9BTC8 594 aa9.8□□□□□ -0.84
UBE3B-208ENST00000538070 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.8□□□□□ -0.84
UBE3B-208ENST00000538070 POTEMA6NI47 508 aa9.8□□□□□ -0.84
UBE3B-208ENST00000538070 PCP11498 1178 aaKnown RBP9.8□□□□□ -0.84
UBE3B-208ENST00000538070 FCER1AP12319 257 aa9.8□□□□□ -0.84
UBE3B-208ENST00000538070 LRRC41Q15345 812 aa9.8□□□□□ -0.84
UBE3B-208ENST00000538070 KMT5BQ4FZB7 885 aa9.8□□□□□ -0.84
UBE3B-208ENST00000538070 REXO1Q8N1G1 1221 aaKnown RBP9.8□□□□□ -0.84
UBE3B-208ENST00000538070 TNFRSF25Q93038 417 aa9.8□□□□□ -0.84
UBE3B-208ENST00000538070 TANGO6Q9C0B7 1094 aa9.8□□□□□ -0.84
UBE3B-208ENST00000538070 MRPL44Q9H9J2 332 aaKnown RBP9.8□□□□□ -0.84
UBE3B-208ENST00000538070 GUCA1BQ9UMX6 200 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms