RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 NUDT12Q9BQG2 462 aa9.93□□□□□ -0.82
SPARC-208ENST00000538026 SLF1Q9BQI6 1058 aa9.93□□□□□ -0.82
SPARC-208ENST00000538026 ESYT1Q9BSJ8 1104 aa9.93□□□□□ -0.82
SPARC-208ENST00000538026 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
SPARC-208ENST00000538026 LCTP09848 1927 aa9.93□□□□□ -0.82
SPARC-208ENST00000538026 TMEM232C9JQI7 657 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 ATP2A1O14983 1001 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 PLA2G6O60733 806 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 HMGCRP04035 888 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 PDHBP11177 359 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 TOP1P11387 765 aaKnown RBP9.92□□□□□ -0.82
SPARC-208ENST00000538026 PCP11498 1178 aaKnown RBP9.92□□□□□ -0.82
SPARC-208ENST00000538026 ADORA2AP29274 412 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 GJA8P48165 433 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 CCNA1P78396 465 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 CACNB2Q08289 660 aaPredicted RBP9.92□□□□□ -0.82
SPARC-208ENST00000538026 PLS1Q14651 629 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 SEC23AQ15436 765 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 ENAHQ8N8S7 591 aaPredicted RBP9.92□□□□□ -0.82
SPARC-208ENST00000538026 SOCS4Q8WXH5 440 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 KIFC2Q96AC6 838 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 FGD4Q96M96 766 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 CRISPLD2Q9H0B8 497 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 RNF208Q9H0X6 261 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 CPVLQ9H3G5 476 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 RAVER2Q9HCJ3 691 aaKnown RBP9.92□□□□□ -0.82
SPARC-208ENST00000538026 TOMM22Q9NS69 142 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 FEM1BQ9UK73 627 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 ALPK3Q96L96 1907 aa9.92□□□□□ -0.82
SPARC-208ENST00000538026 DNAJC25-GNG10A0A024R161 153 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 SGPL1O95470 568 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 PGK2P07205 417 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
SPARC-208ENST00000538026 CCND3P30281 292 aaPredicted RBP9.91□□□□□ -0.82
SPARC-208ENST00000538026 CYP2C19P33261 490 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 SLC16A2P36021 539 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 RGS2P41220 211 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 SLC1A4P43007 532 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 ANTXR2P58335 489 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 IMMTQ16891 758 aaKnown RBP9.91□□□□□ -0.82
SPARC-208ENST00000538026 SLC35G1Q2M3R5 365 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 ZNF792Q3KQV3 632 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 WDR78Q5VTH9 848 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 LHX8Q68G74 356 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 BTNL9Q6UXG8 535 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 NCAPG2Q86XI2 1143 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 AGBL1Q96MI9 1066 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 TTC14Q96N46 770 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 DEFB118Q96PH6 123 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 RNF41Q9H4P4 317 aaPredicted RBP9.91□□□□□ -0.82
SPARC-208ENST00000538026 MROH8Q9H579 483 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 GPHNQ9NQX3 736 aaPredicted RBP9.91□□□□□ -0.82
SPARC-208ENST00000538026 BIN2Q9UBW5 565 aaPredicted RBP9.91□□□□□ -0.82
SPARC-208ENST00000538026 CTNNA3Q9UI47 895 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 PRR12Q9ULL5 1215 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 MTMR7Q9Y216 660 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 RBM8AQ9Y5S9 174 aaKnown RBP9.91□□□□□ -0.82
SPARC-208ENST00000538026 FRMPD3Q5JV73 1810 aa9.91□□□□□ -0.82
SPARC-208ENST00000538026 FRMPD2Q68DX3 1309 aaPredicted RBP9.9□□□□□ -0.82
SPARC-208ENST00000538026 E7EWF7 191 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 STRNO43815 780 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 SLC25A27O95847 323 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 UBXN2AP68543 259 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 ZNF543Q08ER8 600 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 NECTIN1Q15223 517 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 PRAMEF19Q5SWL8 479 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 SNRNP48Q6IEG0 339 aaKnown RBP9.9□□□□□ -0.82
SPARC-208ENST00000538026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.9□□□□□ -0.82
SPARC-208ENST00000538026 CHST3Q7LGC8 479 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 DGKHQ86XP1 1220 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 ABRAQ8N0Z2 381 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 CPXCR1Q8N123 301 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 U2AF1L4Q8WU68 220 aaKnown RBP9.9□□□□□ -0.82
SPARC-208ENST00000538026 DCAF4Q8WV16 495 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 RUFY2Q8WXA3 655 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 ESR2Q92731 530 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 ZSCAN10Q96SZ4 725 aaPredicted RBP9.9□□□□□ -0.82
SPARC-208ENST00000538026 APBA2Q99767 749 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 TMEM106CQ9BVX2 250 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 TEX13BQ9BXU2 312 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.9□□□□□ -0.82
SPARC-208ENST00000538026 GPCPD1Q9NPB8 672 aa9.9□□□□□ -0.82
SPARC-208ENST00000538026 U3KPZ7 1027 aaPredicted RBP9.9□□□□□ -0.82
SPARC-208ENST00000538026 TRIOBPQ9H2D6 2365 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 ASTN1O14525 1302 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 TNKSO95271 1327 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 RPTORQ8N122 1335 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 SLC27A2O14975 620 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 ZBED4O75132 1171 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 GOLGA8HP0CJ92 632 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 ZKSCAN1P17029 563 aaPredicted RBP9.89□□□□□ -0.83
SPARC-208ENST00000538026 STAT2P52630 851 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 MUM1L1Q5H9M0 696 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 CCAR1Q8IX12 1150 aaKnown RBP9.89□□□□□ -0.83
SPARC-208ENST00000538026 MB21D2Q8IYB1 491 aaPredicted RBP9.89□□□□□ -0.83
SPARC-208ENST00000538026 RASEFQ8IZ41 740 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 IGDCC4Q8TDY8 1250 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 CHURC1Q8WUH1 139 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 MAML3Q96JK9 1138 aa9.89□□□□□ -0.83
SPARC-208ENST00000538026 RANBP17Q9H2T7 1088 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms