RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 FBXO28Q9NVF7 368 aa13.52□□□□□ -0.25
CLPB-208ENST00000538021 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.25
CLPB-208ENST00000538021 DBNLQ9UJU6 430 aaKnown RBP13.52□□□□□ -0.25
CLPB-208ENST00000538021 ARIH1Q9Y4X5 557 aaPredicted RBP13.52□□□□□ -0.25
CLPB-208ENST00000538021 RAD21O60216 631 aa13.51□□□□□ -0.25
CLPB-208ENST00000538021 DUSP11O75319 330 aaKnown RBP13.51□□□□□ -0.25
CLPB-208ENST00000538021 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
CLPB-208ENST00000538021 SNAI1O95863 264 aaPredicted RBP13.51□□□□□ -0.25
CLPB-208ENST00000538021 GNASQ5JWF2 1037 aa13.51□□□□□ -0.25
CLPB-208ENST00000538021 SIAH1Q8IUQ4 282 aa13.51□□□□□ -0.25
CLPB-208ENST00000538021 FAM126BQ8IXS8 530 aa13.51□□□□□ -0.25
CLPB-208ENST00000538021 RIOK1Q9BRS2 568 aaKnown RBP13.51□□□□□ -0.25
CLPB-208ENST00000538021 TMX2Q9Y320 296 aa13.51□□□□□ -0.25
CLPB-208ENST00000538021 GBF1Q92538 1859 aa13.5□□□□□ -0.25
CLPB-208ENST00000538021 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
CLPB-208ENST00000538021 VWA5AO00534 786 aa13.5□□□□□ -0.25
CLPB-208ENST00000538021 ERC2O15083 957 aa13.5□□□□□ -0.25
CLPB-208ENST00000538021 CT47B1P0C2W7 299 aaPredicted RBP13.5□□□□□ -0.25
CLPB-208ENST00000538021 CYP2D6P10635 497 aa13.5□□□□□ -0.25
CLPB-208ENST00000538021 AKR1B1P15121 316 aa13.5□□□□□ -0.25
CLPB-208ENST00000538021 MYOGP15173 224 aa13.5□□□□□ -0.25
CLPB-208ENST00000538021 CST5P28325 142 aaPredicted RBP13.5□□□□□ -0.25
CLPB-208ENST00000538021 COPB2P35606 906 aa13.5□□□□□ -0.25
CLPB-208ENST00000538021 DDX11Q96FC9 970 aa13.5□□□□□ -0.25
CLPB-208ENST00000538021 DYNLL2Q96FJ2 89 aa13.5□□□□□ -0.25
CLPB-208ENST00000538021 CRNKL1Q9BZJ0 848 aaKnown RBP13.5□□□□□ -0.25
CLPB-208ENST00000538021 ADAMTS5Q9UNA0 930 aa13.5□□□□□ -0.25
CLPB-208ENST00000538021 NAV1Q8NEY1 1877 aa13.5□□□□□ -0.25
CLPB-208ENST00000538021 ZBBXA8MT70 800 aa13.49□□□□□ -0.25
CLPB-208ENST00000538021 SLC4A3P48751 1232 aa13.49□□□□□ -0.25
CLPB-208ENST00000538021 CCL23P55773 120 aa13.49□□□□□ -0.25
CLPB-208ENST00000538021 ACVR2BQ13705 512 aa13.49□□□□□ -0.25
CLPB-208ENST00000538021 MSL3Q8N5Y2 521 aaKnown RBP13.49□□□□□ -0.25
CLPB-208ENST00000538021 SDR42E1Q8WUS8 393 aa13.49□□□□□ -0.25
CLPB-208ENST00000538021 ARHGAP45Q92619 1136 aa13.49□□□□□ -0.25
CLPB-208ENST00000538021 HIPK3Q9H422 1215 aa13.49□□□□□ -0.25
CLPB-208ENST00000538021 SWAP70Q9UH65 585 aa13.49□□□□□ -0.25
CLPB-208ENST00000538021 ZNF214Q9UL59 606 aaPredicted RBP13.49□□□□□ -0.25
CLPB-208ENST00000538021 PPP1R9AQ9ULJ8 1098 aa13.49□□□□□ -0.25
CLPB-208ENST00000538021 SLC4A7Q9Y6M7 1214 aa13.49□□□□□ -0.25
CLPB-208ENST00000538021 PARP14Q460N5 1801 aa13.48□□□□□ -0.25
CLPB-208ENST00000538021 UMODL1Q5DID0 1318 aa13.48□□□□□ -0.25
CLPB-208ENST00000538021 RFXAPO00287 272 aa13.48□□□□□ -0.25
CLPB-208ENST00000538021 ADCY6O43306 1168 aa13.48□□□□□ -0.25
CLPB-208ENST00000538021 GTPBP6O43824 516 aaPredicted RBP13.48□□□□□ -0.25
CLPB-208ENST00000538021 RARSP54136 660 aaKnown RBP13.48□□□□□ -0.25
CLPB-208ENST00000538021 GJA9P57773 515 aa13.48□□□□□ -0.25
CLPB-208ENST00000538021 ALYREFQ86V81 257 aaKnown RBP13.48□□□□□ -0.25
CLPB-208ENST00000538021 EAF2Q96CJ1 260 aaPredicted RBP13.48□□□□□ -0.25
CLPB-208ENST00000538021 CERS4Q9HA82 394 aa13.48□□□□□ -0.25
CLPB-208ENST00000538021 FAM86C2PA6NEL3 165 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 BCAR3O75815 825 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 CD4P01730 458 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 EEF2P13639 858 aaKnown RBP13.47□□□□□ -0.25
CLPB-208ENST00000538021 POLA2Q14181 598 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 CCDC144BQ3MJ40 725 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 FAM83BQ5T0W9 1011 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 SNRNP48Q6IEG0 339 aaKnown RBP13.47□□□□□ -0.25
CLPB-208ENST00000538021 TMED8Q6PL24 325 aaPredicted RBP13.47□□□□□ -0.25
CLPB-208ENST00000538021 MAMDC4Q6UXC1 1216 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 TRMT2AQ8IZ69 625 aaKnown RBP13.47□□□□□ -0.25
CLPB-208ENST00000538021 REPS2Q8NFH8 660 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 CLUAP1Q96AJ1 413 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 DCP1AQ9NPI6 582 aaPredicted RBP13.47□□□□□ -0.25
CLPB-208ENST00000538021 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.47□□□□□ -0.25
CLPB-208ENST00000538021 TNNQ9UQP3 1299 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 PCDHA11Q9Y5I1 949 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 MTCH2Q9Y6C9 303 aa13.47□□□□□ -0.25
CLPB-208ENST00000538021 TRANK1O15050 2925 aa13.46□□□□□ -0.25
CLPB-208ENST00000538021 TRIM27P14373 513 aa13.46□□□□□ -0.25
CLPB-208ENST00000538021 BEX3Q00994 111 aa13.46□□□□□ -0.25
CLPB-208ENST00000538021 SLC9C2Q5TAH2 1124 aa13.46□□□□□ -0.25
CLPB-208ENST00000538021 NOL8Q76FK4 1167 aaKnown RBP13.46□□□□□ -0.25
CLPB-208ENST00000538021 RPUSD2Q8IZ73 545 aaKnown RBP13.46□□□□□ -0.25
CLPB-208ENST00000538021 SSH3Q8TE77 659 aa13.46□□□□□ -0.25
CLPB-208ENST00000538021 TEX13BQ9BXU2 312 aa13.46□□□□□ -0.25
CLPB-208ENST00000538021 UPF3AQ9H1J1 476 aaKnown RBP13.46□□□□□ -0.25
CLPB-208ENST00000538021 ABHD16BQ9H3Z7 469 aa13.46□□□□□ -0.25
CLPB-208ENST00000538021 GOPCQ9HD26 462 aa13.46□□□□□ -0.25
CLPB-208ENST00000538021 COG5Q9UP83 839 aa13.46□□□□□ -0.25
CLPB-208ENST00000538021 RIPK3Q9Y572 518 aa13.46□□□□□ -0.25
CLPB-208ENST00000538021 MYH8P13535 1937 aa13.45□□□□□ -0.26
CLPB-208ENST00000538021 IPO8O15397 1037 aaKnown RBP13.45□□□□□ -0.26
CLPB-208ENST00000538021 TLL1O43897 1013 aa13.45□□□□□ -0.26
CLPB-208ENST00000538021 PDE6AP16499 860 aa13.45□□□□□ -0.26
CLPB-208ENST00000538021 ATP2A2P16615 1042 aaKnown RBP13.45□□□□□ -0.26
CLPB-208ENST00000538021 ATP8B2P98198 1209 aa13.45□□□□□ -0.26
CLPB-208ENST00000538021 KRT40Q6A162 431 aa13.45□□□□□ -0.26
CLPB-208ENST00000538021 CXCL17Q6UXB2 119 aa13.45□□□□□ -0.26
CLPB-208ENST00000538021 CPXCR1Q8N123 301 aa13.45□□□□□ -0.26
CLPB-208ENST00000538021 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
CLPB-208ENST00000538021 FRAT1Q92837 279 aaPredicted RBP13.45□□□□□ -0.26
CLPB-208ENST00000538021 CCDC17Q96LX7 622 aa13.45□□□□□ -0.26
CLPB-208ENST00000538021 C1orf115Q9H7X2 142 aa13.45□□□□□ -0.26
CLPB-208ENST00000538021 PRRC2BQ5JSZ5 2229 aaKnown RBP13.45□□□□□ -0.26
CLPB-208ENST00000538021 ZNF532Q9HCE3 1301 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 DNAJC25-GNG10A0A024R161 153 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 GPR37L1O60883 481 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 CA3P07451 260 aa13.44□□□□□ -0.26
CLPB-208ENST00000538021 ITGA7Q13683 1181 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms