RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 ALYREFQ86V81 257 aaKnown RBP6.8□□□□□ -1.32
SNHG1-207ENST00000537965 SAP130Q9H0E3 1048 aa6.8□□□□□ -1.32
SNHG1-207ENST00000537965 MINPP1Q9UNW1 487 aa6.8□□□□□ -1.32
SNHG1-207ENST00000537965 ZNF646O15015 1829 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-207ENST00000537965 COL1A1P02452 1464 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-207ENST00000537965 MYO1BO43795 1136 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 ZNF853P0CG23 659 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 COL8A1P27658 744 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 ADH7P40394 386 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 NBPF9Q3BBW0 867 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 DACT2Q5SW24 774 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 KSR2Q6VAB6 950 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 CAPN12Q6ZSI9 719 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 TTLL11Q8NHH1 800 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 MPHOSPH8Q99549 860 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 STK31Q9BXU1 1019 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 SUV39H2Q9H5I1 410 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 PHAXQ9H814 394 aaKnown RBP6.79□□□□□ -1.32
SNHG1-207ENST00000537965 PPP2R3BQ9Y5P8 575 aa6.79□□□□□ -1.32
SNHG1-207ENST00000537965 COL4A1P02462 1669 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 ELL2O00472 640 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-207ENST00000537965 ZBTB48P10074 688 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-207ENST00000537965 KCNJ4P48050 445 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 PTPN12Q05209 780 aaKnown RBP6.78□□□□□ -1.32
SNHG1-207ENST00000537965 DLGAP5Q15398 846 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 SUPT20HL1Q3ZLR7 823 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 LDLRAD1Q5T700 205 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 PRAMEF18Q5VWM3 479 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 TREML1Q86YW5 311 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 ERO1AQ96HE7 468 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 PNMA5Q96PV4 448 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 MKNK1Q9BUB5 465 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 ANGEL1Q9UNK9 670 aaKnown RBP6.78□□□□□ -1.32
SNHG1-207ENST00000537965 MAP3K2Q9Y2U5 619 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 STARD13Q9Y3M8 1113 aa6.78□□□□□ -1.32
SNHG1-207ENST00000537965 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-207ENST00000537965 ZNF804BA4D1E1 1349 aa6.77□□□□□ -1.32
SNHG1-207ENST00000537965 CENPFP49454 3210 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 PI4KAP2A4QPH2 592 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 WDHD1O75717 1129 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-207ENST00000537965 MAP3K6O95382 1288 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 NFKB1P19838 968 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 BRD2P25440 801 aaKnown RBP6.77□□□□□ -1.33
SNHG1-207ENST00000537965 IREB2P48200 963 aaKnown RBP6.77□□□□□ -1.33
SNHG1-207ENST00000537965 FKBP1AP62942 108 aaKnown RBP6.77□□□□□ -1.33
SNHG1-207ENST00000537965 NAA30Q147X3 362 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-207ENST00000537965 MAP3K11Q16584 847 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 MOB2Q70IA6 237 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 ETFBKMTQ8IXQ9 262 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 PI4KAP1Q8N8J0 262 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 PLA2G12BQ9BX93 195 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 DEFB129Q9H1M3 183 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 MYH16Q9H6N6 1097 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 GREM2Q9H772 168 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 PRDM6Q9NQX0 595 aa6.77□□□□□ -1.33
SNHG1-207ENST00000537965 MKI67P46013 3256 aaKnown RBP6.77□□□□□ -1.33
SNHG1-207ENST00000537965 KRBA1A5PL33 1030 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 M0R082 166 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 APAF1O14727 1248 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 TNFRSF10BO14763 440 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 IGHA1P01876 353 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 DDX10Q13206 875 aaKnown RBP6.76□□□□□ -1.33
SNHG1-207ENST00000537965 TNFAIP1Q13829 316 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 PRKG1Q13976 671 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 PLA2G4EQ3MJ16 856 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 C20orf204Q6ZNR8 217 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 UBE3BQ7Z3V4 1068 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 ZNF804AQ7Z570 1209 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 NBPF11Q86T75 865 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 KIAA0825Q8IV33 1275 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 MICALL1Q8N3F8 863 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 ZNF417Q8TAU3 575 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 JARID2Q92833 1246 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-207ENST00000537965 TRIM11Q96F44 468 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 ZNF587Q96SQ5 575 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-207ENST00000537965 UBE2OQ9C0C9 1292 aaKnown RBP6.76□□□□□ -1.33
SNHG1-207ENST00000537965 CD209Q9NNX6 404 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 NOP53Q9NZM5 478 aaKnown RBP6.76□□□□□ -1.33
SNHG1-207ENST00000537965 TRIM17Q9Y577 477 aa6.76□□□□□ -1.33
SNHG1-207ENST00000537965 A0A1B0GUL6 1792 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 ANKRD18BA2A2Z9 1011 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 SASH1O94885 1247 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 ALBP02768 609 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 ITGB2P05107 769 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 IGKV5-2P06315 115 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 CSF1RP07333 972 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 COL9A3Q14050 684 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-207ENST00000537965 FAM26DQ5JW98 314 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 GPAT2Q6NUI2 795 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 C15orf52Q6ZUT6 534 aaKnown RBP6.75□□□□□ -1.33
SNHG1-207ENST00000537965 OTOP1Q7RTM1 612 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 ANKRD13AQ8IZ07 590 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 C8orf58Q8NAV2 365 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 ZBED3Q96IU2 234 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-207ENST00000537965 WNK4Q96J92 1243 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 IGFLR1Q9H665 355 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 DNAJB12Q9NXW2 375 aaKnown RBP6.75□□□□□ -1.33
SNHG1-207ENST00000537965 ZFATQ9P243 1243 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 SLC6A14Q9UN76 642 aa6.75□□□□□ -1.33
SNHG1-207ENST00000537965 SCAF8Q9UPN6 1271 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms