RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 SBK1Q52WX2 424 aa10.67□□□□□ -0.7
SMAD3-203ENST00000537194 PPP4R3BQ5MIZ7 849 aa10.67□□□□□ -0.7
SMAD3-203ENST00000537194 DIEXFQ68CQ4 756 aaKnown RBP10.67□□□□□ -0.7
SMAD3-203ENST00000537194 SIAH1Q8IUQ4 282 aa10.67□□□□□ -0.7
SMAD3-203ENST00000537194 MIER1Q8N108 512 aa10.67□□□□□ -0.7
SMAD3-203ENST00000537194 ANKRD35Q8N283 1001 aa10.67□□□□□ -0.7
SMAD3-203ENST00000537194 PCSK9Q8NBP7 692 aaKnown RBP10.67□□□□□ -0.7
SMAD3-203ENST00000537194 GLT1D1Q96MS3 346 aa10.67□□□□□ -0.7
SMAD3-203ENST00000537194 GUCD1Q96NT3 240 aa10.67□□□□□ -0.7
SMAD3-203ENST00000537194 ECHDC1Q9NTX5 307 aa10.67□□□□□ -0.7
SMAD3-203ENST00000537194 NYAP2Q9P242 653 aa10.67□□□□□ -0.7
SMAD3-203ENST00000537194 FEM1BQ9UK73 627 aa10.67□□□□□ -0.7
SMAD3-203ENST00000537194 ZHX1Q9UKY1 873 aaPredicted RBP10.67□□□□□ -0.7
SMAD3-203ENST00000537194 A0A1W2PQ45 241 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-203ENST00000537194 A0A1W2PQY0 241 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 F5H6K3 240 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 TLR3O15455 904 aaKnown RBP10.66□□□□□ -0.7
SMAD3-203ENST00000537194 FDX1P10109 184 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 FOSL2P15408 326 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 KLRC3Q07444 240 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 IKQ13123 557 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-203ENST00000537194 C9orf50Q5SZB4 431 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 CPXCR1Q8N123 301 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 STK11IPQ8N1F8 1099 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 MAFAQ8NHW3 353 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-203ENST00000537194 KIFC2Q96AC6 838 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 TOX2Q96NM4 488 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 STRBPQ96SI9 672 aaKnown RBP10.66□□□□□ -0.7
SMAD3-203ENST00000537194 CDX2Q99626 313 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-203ENST00000537194 PUS7LQ9H0K6 701 aaKnown RBP10.66□□□□□ -0.7
SMAD3-203ENST00000537194 SEMA6BQ9H3T3 888 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 CLIP2Q9UDT6 1046 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-203ENST00000537194 RCAN3Q9UKA8 241 aa10.66□□□□□ -0.7
SMAD3-203ENST00000537194 ZNF214Q9UL59 606 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-203ENST00000537194 ROBO3Q96MS0 1386 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 MCM3APO60318 1980 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-203ENST00000537194 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-203ENST00000537194 TRIM43BA6NCK2 446 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 KIAA0355O15063 1070 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 ERC2O15083 957 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 RNF113AO15541 343 aaKnown RBP10.65□□□□□ -0.7
SMAD3-203ENST00000537194 DUSP11O75319 330 aaKnown RBP10.65□□□□□ -0.7
SMAD3-203ENST00000537194 TTLL1O95922 423 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 NDUFB10O96000 172 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 C6orf222P0C671 652 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-203ENST00000537194 ZNF865P0CJ78 1059 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-203ENST00000537194 ACLYP53396 1101 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 PDE4BQ07343 736 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 SLFNL1Q499Z3 407 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 NOL8Q76FK4 1167 aaKnown RBP10.65□□□□□ -0.7
SMAD3-203ENST00000537194 SH3RF1Q7Z6J0 888 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 ZNF467Q7Z7K2 595 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-203ENST00000537194 SIRT2Q8IXJ6 389 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 KBTBD3Q8NAB2 608 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 CHST13Q8NET6 341 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 CHURC1Q8WUH1 139 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 APPBP2Q92624 585 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 SYMPKQ92797 1274 aaKnown RBP10.65□□□□□ -0.7
SMAD3-203ENST00000537194 TRIM43Q96BQ3 446 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-203ENST00000537194 MTIF3Q9H2K0 278 aaKnown RBP10.65□□□□□ -0.7
SMAD3-203ENST00000537194 ABHD16BQ9H3Z7 469 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 SYNPO2Q9UMS6 1093 aa10.65□□□□□ -0.7
SMAD3-203ENST00000537194 ELP1O95163 1332 aa10.64□□□□□ -0.71
SMAD3-203ENST00000537194 ATP2A1O14983 1001 aa10.64□□□□□ -0.71
SMAD3-203ENST00000537194 TSPY3P0CV98 308 aa10.64□□□□□ -0.71
SMAD3-203ENST00000537194 TSPY8P0CW00 308 aa10.64□□□□□ -0.71
SMAD3-203ENST00000537194 TAL1P17542 331 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-203ENST00000537194 RASA1P20936 1047 aa10.64□□□□□ -0.71
SMAD3-203ENST00000537194 OAZ1P54368 228 aa10.64□□□□□ -0.71
SMAD3-203ENST00000537194 PPIGQ13427 754 aaKnown RBP eCLIP10.64□□□□□ -0.712e-8■□□□□ 9.8
SMAD3-203ENST00000537194 ACVR2BQ13705 512 aa10.64□□□□□ -0.71
SMAD3-203ENST00000537194 KCNA10Q16322 511 aa10.64□□□□□ -0.71
SMAD3-203ENST00000537194 MAMDC4Q6UXC1 1216 aa10.64□□□□□ -0.71
SMAD3-203ENST00000537194 ANKRD33Q7Z3H0 272 aa10.64□□□□□ -0.71
SMAD3-203ENST00000537194 TMEM199Q8N511 208 aa10.64□□□□□ -0.71
SMAD3-203ENST00000537194 NUP88Q99567 741 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-203ENST00000537194 COL25A1Q9BXS0 654 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-203ENST00000537194 SYNRGQ9UMZ2 1314 aa10.63□□□□□ -0.71
SMAD3-203ENST00000537194 A0A0U1RQG5 324 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-203ENST00000537194 GSG1L2A8MUP6 293 aa10.63□□□□□ -0.71
SMAD3-203ENST00000537194 GPAA1O43292 621 aa10.63□□□□□ -0.71
SMAD3-203ENST00000537194 SMARCA5O60264 1052 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-203ENST00000537194 ZEB2O60315 1214 aa10.63□□□□□ -0.71
SMAD3-203ENST00000537194 TIMP1P01033 207 aa10.63□□□□□ -0.71
SMAD3-203ENST00000537194 GNASQ5JWF2 1037 aa10.63□□□□□ -0.71
SMAD3-203ENST00000537194 CCDC129Q6ZRS4 1044 aa10.63□□□□□ -0.71
SMAD3-203ENST00000537194 FAM160B2Q86V87 743 aa10.63□□□□□ -0.71
SMAD3-203ENST00000537194 REPS2Q8NFH8 660 aa10.63□□□□□ -0.71
SMAD3-203ENST00000537194 MYLIPQ8WY64 445 aa10.63□□□□□ -0.71
SMAD3-203ENST00000537194 RAVER2Q9HCJ3 691 aaKnown RBP10.63□□□□□ -0.71
SMAD3-203ENST00000537194 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-203ENST00000537194 ASB14A6NK59 587 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 PATL2C9JE40 543 aaKnown RBP10.62□□□□□ -0.71
SMAD3-203ENST00000537194 ADAMTS4O75173 837 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 BMP3P12645 472 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 CST5P28325 142 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-203ENST00000537194 STAT2P52630 851 aa10.62□□□□□ -0.71
SMAD3-203ENST00000537194 TKFCQ3LXA3 575 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms