RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-217ENST00000537162 NBL1P41271 181 aa11.86□□□□□ -0.51
CPSF7-217ENST00000537162 MECOMQ03112 1051 aa11.86□□□□□ -0.51
CPSF7-217ENST00000537162 PKN1Q16512 942 aa11.86□□□□□ -0.51
CPSF7-217ENST00000537162 ZNF792Q3KQV3 632 aa11.86□□□□□ -0.51
CPSF7-217ENST00000537162 ABRAQ8N0Z2 381 aa11.86□□□□□ -0.51
CPSF7-217ENST00000537162 FEZ1Q99689 392 aa11.86□□□□□ -0.51
CPSF7-217ENST00000537162 PI4KBQ9UBF8 816 aa11.86□□□□□ -0.51
CPSF7-217ENST00000537162 ABCF2Q9UG63 623 aa11.86□□□□□ -0.51
CPSF7-217ENST00000537162 COL11A1P12107 1806 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-217ENST00000537162 ZXDAP98168 799 aa11.85□□□□□ -0.51
CPSF7-217ENST00000537162 PLS1Q14651 629 aa11.85□□□□□ -0.51
CPSF7-217ENST00000537162 EP400NLQ6ZTU2 488 aa11.85□□□□□ -0.51
CPSF7-217ENST00000537162 FRMD5Q7Z6J6 570 aa11.85□□□□□ -0.51
CPSF7-217ENST00000537162 ANKRD44Q8N8A2 993 aa11.85□□□□□ -0.51
CPSF7-217ENST00000537162 PHOSPHO2Q8TCD6 241 aa11.85□□□□□ -0.51
CPSF7-217ENST00000537162 LPIN2Q92539 896 aa11.85□□□□□ -0.51
CPSF7-217ENST00000537162 IRF2BPLQ9H1B7 796 aa11.85□□□□□ -0.51
CPSF7-217ENST00000537162 BICC1Q9H694 974 aaKnown RBP11.85□□□□□ -0.51
CPSF7-217ENST00000537162 TPRP12270 2363 aaKnown RBP11.85□□□□□ -0.51
CPSF7-217ENST00000537162 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
CPSF7-217ENST00000537162 ATG2AQ2TAZ0 1938 aa11.84□□□□□ -0.51
CPSF7-217ENST00000537162 DUSP11O75319 330 aaKnown RBP11.84□□□□□ -0.51
CPSF7-217ENST00000537162 SNAI1O95863 264 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-217ENST00000537162 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-217ENST00000537162 FCER1AP12319 257 aa11.84□□□□□ -0.51
CPSF7-217ENST00000537162 BEX3Q00994 111 aa11.84□□□□□ -0.51
CPSF7-217ENST00000537162 CLUL1Q15846 466 aa11.84□□□□□ -0.51
CPSF7-217ENST00000537162 ST3GAL2Q16842 350 aa11.84□□□□□ -0.51
CPSF7-217ENST00000537162 GNASQ5JWF2 1037 aa11.84□□□□□ -0.51
CPSF7-217ENST00000537162 METTL16Q86W50 562 aaKnown RBP11.84□□□□□ -0.51
CPSF7-217ENST00000537162 PCSK9Q8NBP7 692 aaKnown RBP11.84□□□□□ -0.51
CPSF7-217ENST00000537162 SH3RF3Q8TEJ3 882 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-217ENST00000537162 UPF3AQ9H1J1 476 aaKnown RBP11.84□□□□□ -0.51
CPSF7-217ENST00000537162 MROH8Q9H579 483 aa11.84□□□□□ -0.51
CPSF7-217ENST00000537162 C9orf78Q9NZ63 289 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-217ENST00000537162 DENND2AQ9ULE3 1009 aa11.84□□□□□ -0.51
CPSF7-217ENST00000537162 FAM184BQ9ULE4 1060 aa11.84□□□□□ -0.51
CPSF7-217ENST00000537162 ACACBO00763 2458 aa11.84□□□□□ -0.51
CPSF7-217ENST00000537162 PARP14Q460N5 1801 aa11.83□□□□□ -0.51
CPSF7-217ENST00000537162 MAP1BP46821 2468 aaKnown RBP11.83□□□□□ -0.52
CPSF7-217ENST00000537162 TET1Q8NFU7 2136 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 USP24Q9UPU5 2620 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 KIF28PB7ZC32 967 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 KDM4AO75164 1064 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 LTBRP36941 435 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 ERVK-21P61565 698 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 CXCL17Q6UXB2 119 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 TEX11Q8IYF3 940 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 ASIC4Q96FT7 647 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 CHMP4AQ9BY43 222 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 KIAA1683Q9H0B3 1180 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 ZHX1Q9UKY1 873 aaPredicted RBP11.83□□□□□ -0.52
CPSF7-217ENST00000537162 CNPY2Q9Y2B0 182 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 FOCADQ5VW36 1801 aa11.83□□□□□ -0.52
CPSF7-217ENST00000537162 MCM3APO60318 1980 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 PDGFBP01127 241 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-217ENST00000537162 CYP2C9P11712 490 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 PTGS1P23219 599 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 DSG3P32926 999 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 GJA9P57773 515 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 ITGA7Q13683 1181 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 RASGRF1Q13972 1273 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 COG2Q14746 738 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 COL19A1Q14993 1142 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 SMAD2Q15796 467 aaKnown RBP11.82□□□□□ -0.52
CPSF7-217ENST00000537162 TWISTNBQ3B726 338 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-217ENST00000537162 RABL6Q3YEC7 729 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-217ENST00000537162 SLF2Q8IX21 1173 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 PABPC5Q96DU9 382 aaKnown RBP11.82□□□□□ -0.52
CPSF7-217ENST00000537162 MMP19Q99542 508 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 GINM1Q9NU53 330 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 PALD1Q9ULE6 856 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 TANC1Q9C0D5 1861 aa11.82□□□□□ -0.52
CPSF7-217ENST00000537162 FRYLO94915 3013 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 LINC01553A4QN01 128 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 MBTPS2O43462 519 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 GALR2O43603 387 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-217ENST00000537162 PFKMP08237 780 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 ADORA1P30542 326 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 PSMC6P62333 389 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 DLX2Q07687 328 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-217ENST00000537162 TCEAL5Q5H9L2 206 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 KIAA1755Q5JYT7 1200 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 ATG9AQ7Z3C6 839 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 CRACR2BQ8N4Y2 399 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-217ENST00000537162 NKD2Q969F2 451 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-217ENST00000537162 ATG4CQ96DT6 458 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 GNL3LQ9NVN8 582 aaKnown RBP11.81□□□□□ -0.52
CPSF7-217ENST00000537162 FAM50BQ9Y247 325 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 ASTN1O14525 1302 aa11.81□□□□□ -0.52
CPSF7-217ENST00000537162 SETXQ7Z333 2677 aaKnown RBP11.81□□□□□ -0.52
CPSF7-217ENST00000537162 SEMA3EO15041 775 aa11.8□□□□□ -0.52
CPSF7-217ENST00000537162 ACTN1P12814 892 aa11.8□□□□□ -0.52
CPSF7-217ENST00000537162 USP14P54578 494 aa11.8□□□□□ -0.52
CPSF7-217ENST00000537162 DEFB103AP81534 67 aa11.8□□□□□ -0.52
CPSF7-217ENST00000537162 ACAP1Q15027 740 aa11.8□□□□□ -0.52
CPSF7-217ENST00000537162 RAB3GAP1Q15042 981 aa11.8□□□□□ -0.52
CPSF7-217ENST00000537162 FOXP4Q8IVH2 680 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-217ENST00000537162 MAPKAPK5Q8IW41 473 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms