RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CTNNAL1Q9UBT7 734 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 MTRF1LQ9UGC7 380 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 PRPF6O94906 941 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 PRLRP16471 622 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 CASP14P31944 242 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 MCM7P33993 719 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 BAG6P46379 1132 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 TBX2Q13207 712 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 RBM26Q5T8P6 1007 aaKnown RBP5.97□□□□□ -1.45
PTPRD-213ENST00000537002 FBXW10Q5XX13 1052 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 LINC00301Q8NCQ3 95 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 TRIM58Q8NG06 486 aa5.97□□□□□ -1.45
PTPRD-213ENST00000537002 LRRD1A4D1F6 860 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 CEP104O60308 925 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 NFATC2IPQ8NCF5 419 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 LMBR1Q8WVP7 490 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 CTDP1Q9Y5B0 961 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-213ENST00000537002 CLIC4Q9Y696 253 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 OVOS2A0A0G2JMS6 1433 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 OVOS2A0A0J9YW53 1432 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 OVOS2Q6IE36 1432 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 E7ENQ6 273 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 TATP17735 454 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-213ENST00000537002 RBL2Q08999 1139 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 TBC1D8BQ0IIM8 1120 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 PAK1Q13153 545 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 SLC39A14Q15043 492 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 MTHFSDQ2M296 383 aaKnown RBP5.96□□□□□ -1.45
PTPRD-213ENST00000537002 FAM133BQ5BKY9 247 aaKnown RBP5.96□□□□□ -1.45
PTPRD-213ENST00000537002 HOOK3Q86VS8 718 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 CCDC63Q8NA47 563 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 MRRFQ96E11 262 aaKnown RBP5.96□□□□□ -1.45
PTPRD-213ENST00000537002 NUP58Q9BVL2 599 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 CCDC61Q9Y6R9 512 aa5.96□□□□□ -1.45
PTPRD-213ENST00000537002 CEP170BQ9Y4F5 1589 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-213ENST00000537002 PPP2R5EQ16537 467 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 GSPT2Q8IYD1 628 aaKnown RBP5.96□□□□□ -1.46
PTPRD-213ENST00000537002 STAMQ92783 540 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 PLEKHG1Q9ULL1 1385 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 FAM170AA1A519 330 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 CETN2P41208 172 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 POLE2P56282 527 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 PDCLQ13371 301 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 SLC4A8Q2Y0W8 1093 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 NCAPD2Q15021 1401 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 JCADQ9P266 1359 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 ENO4A6NNW6 628 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 HIP1RO75146 1068 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 FECHP22830 423 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 CLUL1Q15846 466 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 MYSM1Q5VVJ2 828 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 CAPRIN2Q6IMN6 1127 aaKnown RBP5.96□□□□□ -1.46
PTPRD-213ENST00000537002 TYW1BQ6NUM6 668 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 DDX27Q96GQ7 796 aaKnown RBP5.96□□□□□ -1.46
PTPRD-213ENST00000537002 RNF41Q9H4P4 317 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-213ENST00000537002 SEC63Q9UGP8 760 aaKnown RBP5.96□□□□□ -1.46
PTPRD-213ENST00000537002 ANAPC4Q9UJX5 808 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 KNDC1Q76NI1 1749 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 PPP1R37O75864 691 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 GJC1P36383 396 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 CFAP221Q4G0U5 840 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 KRT40Q6A162 431 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 ZNF365Q70YC5 407 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 PPP1R14CQ8TAE6 165 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 WDR24Q96S15 920 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 CCDC28BQ9BUN5 200 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 CDCA7Q9BWT1 371 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-213ENST00000537002 HOMER2Q9NSB8 354 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 CORO1CQ9ULV4 474 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-213ENST00000537002 TUBGCP6Q96RT7 1819 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 BICDL2A1A5D9 508 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 GGCXP38435 758 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 RAPGEF1Q13905 1077 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 SLC30A9Q6PML9 568 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 CD302Q8IX05 232 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 ARHGAP18Q8N392 663 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 MMGT1Q8N4V1 131 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 ZKSCAN4Q969J2 545 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-213ENST00000537002 MCUR1Q96AQ8 359 aa5.96□□□□□ -1.46
PTPRD-213ENST00000537002 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.96□□□□□ -1.46
PTPRD-213ENST00000537002 BUB1O43683 1085 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 PFDN1O60925 122 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 ATP1A3P13637 1013 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 RXRBP28702 533 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 KRT2P35908 639 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 MAP3K12Q12852 859 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 GRIK3Q13003 919 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 TMED8Q6PL24 325 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-213ENST00000537002 ARHGAP27Q6ZUM4 889 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 NELFBQ8WX92 580 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 CLIC6Q96NY7 704 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 MROH2AA6NES4 1674 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 ALDH3A1P30838 453 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 RANBP1P43487 201 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 TAF11Q15544 211 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 PTPROQ16827 1216 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 LRIG3Q6UXM1 1119 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 KSR1Q8IVT5 923 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 KLHDC4Q8TBB5 520 aa5.95□□□□□ -1.46
PTPRD-213ENST00000537002 CAVIN3Q969G5 261 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms