RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 RBBP8NLQ8NC74 664 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-207ENST00000536634 SPATA32Q96LK8 384 aa8.63□□□□□ -1.03
CLIP1-207ENST00000536634 SLC6A18Q96N87 628 aa8.63□□□□□ -1.03
CLIP1-207ENST00000536634 RC3H2Q9HBD1 1191 aaKnown RBP8.63□□□□□ -1.03
CLIP1-207ENST00000536634 CLEC3AO75596 197 aa8.62□□□□□ -1.03
CLIP1-207ENST00000536634 TPP2P29144 1249 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-207ENST00000536634 CCNFP41002 786 aa8.62□□□□□ -1.03
CLIP1-207ENST00000536634 NASPP49321 788 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-207ENST00000536634 RNF4P78317 190 aa8.62□□□□□ -1.03
CLIP1-207ENST00000536634 ZYXQ15942 572 aaKnown RBP8.62□□□□□ -1.03
CLIP1-207ENST00000536634 TRIT1Q9H3H1 467 aaKnown RBP8.62□□□□□ -1.03
CLIP1-207ENST00000536634 LMCD1Q9NZU5 365 aa8.62□□□□□ -1.03
CLIP1-207ENST00000536634 SNW1Q13573 536 aaKnown RBP8.61□□□□□ -1.03
CLIP1-207ENST00000536634 NBPF9Q3BBW0 867 aa8.61□□□□□ -1.03
CLIP1-207ENST00000536634 TSPYL5Q86VY4 417 aaPredicted RBP8.61□□□□□ -1.03
CLIP1-207ENST00000536634 CREG2Q8IUH2 290 aa8.61□□□□□ -1.03
CLIP1-207ENST00000536634 TAB3Q8N5C8 712 aaPredicted RBP8.61□□□□□ -1.03
CLIP1-207ENST00000536634 TM9SF2Q99805 663 aa8.61□□□□□ -1.03
CLIP1-207ENST00000536634 IGSF5Q9NSI5 407 aa8.61□□□□□ -1.03
CLIP1-207ENST00000536634 GPATCH2Q9NW75 528 aa8.61□□□□□ -1.03
CLIP1-207ENST00000536634 FER1L4A9Z1Z3 1794 aa8.61□□□□□ -1.03
CLIP1-207ENST00000536634 INTS3Q68E01 1043 aaKnown RBP8.6□□□□□ -1.03
CLIP1-207ENST00000536634 TMPRSS7Q7RTY8 843 aa8.6□□□□□ -1.03
CLIP1-207ENST00000536634 TMC3Q7Z5M5 1100 aa8.6□□□□□ -1.03
CLIP1-207ENST00000536634 YEATS2Q9ULM3 1422 aa8.6□□□□□ -1.03
CLIP1-207ENST00000536634 STRCQ7RTU9 1775 aa8.6□□□□□ -1.03
CLIP1-207ENST00000536634 TTC37Q6PGP7 1564 aa8.6□□□□□ -1.03
CLIP1-207ENST00000536634 GUCY2CP25092 1073 aa8.59□□□□□ -1.03
CLIP1-207ENST00000536634 EIF6P56537 245 aaKnown RBP8.59□□□□□ -1.03
CLIP1-207ENST00000536634 SHDQ96IW2 340 aa8.59□□□□□ -1.03
CLIP1-207ENST00000536634 SRRTQ9BXP5 876 aaKnown RBP8.59□□□□□ -1.03
CLIP1-207ENST00000536634 DUSP13Q9UII6 198 aa8.59□□□□□ -1.03
CLIP1-207ENST00000536634 FANCAO15360 1455 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 DENND4BO75064 1496 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-207ENST00000536634 FHOD3Q2V2M9 1422 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 C9IYK1 514 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 E9PSI1 815 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 PAPLNO95428 1278 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 ITGB5P18084 799 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 GIPRP48546 466 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 NMIQ13287 307 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-207ENST00000536634 TDRD10Q5VZ19 366 aaKnown RBP8.58□□□□□ -1.04
CLIP1-207ENST00000536634 UNC5AQ6ZN44 842 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 PPFIBP1Q86W92 1011 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 SEC16BQ96JE7 1060 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 CRBNQ96SW2 442 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 HDAC8Q9BY41 377 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 PRDM14Q9GZV8 571 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 MKRN2Q9H000 416 aaKnown RBP8.58□□□□□ -1.04
CLIP1-207ENST00000536634 CAPN10Q9HC96 672 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 SUCOQ9UBS9 1254 aaKnown RBP8.58□□□□□ -1.04
CLIP1-207ENST00000536634 PCDHA11Q9Y5I1 949 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 ZMYM4Q5VZL5 1548 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 RAPGEF6Q8TEU7 1601 aa8.58□□□□□ -1.04
CLIP1-207ENST00000536634 AKNAQ7Z591 1439 aa8.57□□□□□ -1.04
CLIP1-207ENST00000536634 PREX1Q8TCU6 1659 aa8.57□□□□□ -1.04
CLIP1-207ENST00000536634 C19orf73Q9NVV2 129 aa8.57□□□□□ -1.04
CLIP1-207ENST00000536634 SLAMF8Q9P0V8 285 aa8.57□□□□□ -1.04
CLIP1-207ENST00000536634 MINPP1Q9UNW1 487 aa8.57□□□□□ -1.04
CLIP1-207ENST00000536634 CTNND2Q9UQB3 1225 aa8.57□□□□□ -1.04
CLIP1-207ENST00000536634 ZFYVE16Q7Z3T8 1539 aa8.57□□□□□ -1.04
CLIP1-207ENST00000536634 PRXQ9BXM0 1461 aa8.57□□□□□ -1.04
CLIP1-207ENST00000536634 DNAJC25-GNG10A0A024R161 153 aa8.56□□□□□ -1.04
CLIP1-207ENST00000536634 ATF4P18848 351 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-207ENST00000536634 LTKP29376 864 aa8.56□□□□□ -1.04
CLIP1-207ENST00000536634 PMS1P54277 932 aaKnown RBP8.56□□□□□ -1.04
CLIP1-207ENST00000536634 EGR3Q06889 387 aa8.56□□□□□ -1.04
CLIP1-207ENST00000536634 CLEC16AQ2KHT3 1053 aa8.56□□□□□ -1.04
CLIP1-207ENST00000536634 RALGPS1Q5JS13 557 aa8.56□□□□□ -1.04
CLIP1-207ENST00000536634 TINF2Q9BSI4 451 aa8.56□□□□□ -1.04
CLIP1-207ENST00000536634 NUP153P49790 1475 aaKnown RBP8.56□□□□□ -1.04
CLIP1-207ENST00000536634 SAMD9Q5K651 1589 aa8.56□□□□□ -1.04
CLIP1-207ENST00000536634 LTBP3Q9NS15 1303 aa8.55□□□□□ -1.04
CLIP1-207ENST00000536634 POGZQ7Z3K3 1410 aa8.55□□□□□ -1.04
CLIP1-207ENST00000536634 ARHGEF12Q9NZN5 1544 aa8.55□□□□□ -1.04
CLIP1-207ENST00000536634 SHOXO15266 292 aa8.55□□□□□ -1.04
CLIP1-207ENST00000536634 PRAMEF1O95521 474 aa8.55□□□□□ -1.04
CLIP1-207ENST00000536634 TTC6Q86TZ1 520 aa8.55□□□□□ -1.04
CLIP1-207ENST00000536634 FAM169BQ8N8A8 192 aa8.55□□□□□ -1.04
CLIP1-207ENST00000536634 SYTL5Q8TDW5 730 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-207ENST00000536634 CPLX3Q8WVH0 158 aa8.55□□□□□ -1.04
CLIP1-207ENST00000536634 DHRS1Q96LJ7 313 aa8.55□□□□□ -1.04
CLIP1-207ENST00000536634 ALPK1Q96QP1 1244 aa8.55□□□□□ -1.04
CLIP1-207ENST00000536634 FAM86C1Q9NVL1 165 aa8.55□□□□□ -1.04
CLIP1-207ENST00000536634 EFCAB5A4FU69 1503 aa8.54□□□□□ -1.04
CLIP1-207ENST00000536634 HECW1Q76N89 1606 aa8.54□□□□□ -1.04
CLIP1-207ENST00000536634 CFAP74Q9C0B2 1584 aa8.54□□□□□ -1.04
CLIP1-207ENST00000536634 A0A1W2PQH9 124 aa8.54□□□□□ -1.04
CLIP1-207ENST00000536634 AUHQ13825 339 aaKnown RBP8.54□□□□□ -1.04
CLIP1-207ENST00000536634 ATG4DQ86TL0 474 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-207ENST00000536634 FLAD1Q8NFF5 587 aa8.54□□□□□ -1.04
CLIP1-207ENST00000536634 ENOX1Q8TC92 643 aaKnown RBP8.54□□□□□ -1.04
CLIP1-207ENST00000536634 ASCC2Q9H1I8 757 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-207ENST00000536634 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLIP1-207ENST00000536634 CEBPAP49715 358 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-207ENST00000536634 AXDND1Q5T1B0 1012 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-207ENST00000536634 DCAF15Q66K64 600 aa8.53□□□□□ -1.04
CLIP1-207ENST00000536634 CCDC144CPQ8IYA2 1237 aa8.53□□□□□ -1.04
CLIP1-207ENST00000536634 OR6P1Q8NGX9 317 aa8.53□□□□□ -1.04
CLIP1-207ENST00000536634 ADAMTS10Q9H324 1103 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms