RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 TOMM22Q9NS69 142 aa16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 ZMYND8Q9ULU4 1186 aaPredicted RBP16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 STX8Q9UNK0 236 aa16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 TACC3Q9Y6A5 838 aa16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 ALPK3Q96L96 1907 aa16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 NMT2O60551 498 aa16.94■□□□□ 0.3
RTN3P1-201ENST00000536295 MSCO60682 206 aa16.94■□□□□ 0.3
RTN3P1-201ENST00000536295 BMP3P12645 472 aa16.94■□□□□ 0.3
RTN3P1-201ENST00000536295 COPB2P35606 906 aa16.94■□□□□ 0.3
RTN3P1-201ENST00000536295 FXR1P51114 621 aaKnown RBP eCLIP16.94■□□□□ 0.3
RTN3P1-201ENST00000536295 RAVER2Q9HCJ3 691 aaKnown RBP16.94■□□□□ 0.3
RTN3P1-201ENST00000536295 FEM1BQ9UK73 627 aa16.94■□□□□ 0.3
RTN3P1-201ENST00000536295 SYNPO2Q9UMS6 1093 aa16.94■□□□□ 0.3
RTN3P1-201ENST00000536295 RIPK3Q9Y572 518 aa16.94■□□□□ 0.3
RTN3P1-201ENST00000536295 TMEM232C9JQI7 657 aa16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 FGAP02671 866 aa16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 MYCNP04198 464 aaPredicted RBP16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 HSPD1P10809 573 aaKnown RBP16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 COL6A1P12109 1028 aa16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 SYN1P17600 705 aa16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 IRX6P78412 446 aaPredicted RBP16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 IKQ13123 557 aaPredicted RBP16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 ALX1Q15699 326 aa16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 RRP12Q5JTH9 1297 aaKnown RBP16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 IL17RBQ9NRM6 502 aa16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 ANAPC4Q9UJX5 808 aa16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 MTMR7Q9Y216 660 aa16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 CCDC171Q6TFL3 1326 aa16.93■□□□□ 0.3
RTN3P1-201ENST00000536295 FRMPD3Q5JV73 1810 aa16.92■□□□□ 0.3
RTN3P1-201ENST00000536295 SDSP20132 328 aa16.92■□□□□ 0.3
RTN3P1-201ENST00000536295 MCCP23508 829 aa16.92■□□□□ 0.3
RTN3P1-201ENST00000536295 SLC1A4P43007 532 aa16.92■□□□□ 0.3
RTN3P1-201ENST00000536295 HAND2P61296 217 aa16.92■□□□□ 0.3
RTN3P1-201ENST00000536295 LRRC26Q2I0M4 334 aa16.92■□□□□ 0.3
RTN3P1-201ENST00000536295 ZNF792Q3KQV3 632 aa16.92■□□□□ 0.3
RTN3P1-201ENST00000536295 SENP6Q9GZR1 1112 aaPredicted RBP16.92■□□□□ 0.3
RTN3P1-201ENST00000536295 SLC38A10Q9HBR0 1119 aa16.92■□□□□ 0.3
RTN3P1-201ENST00000536295 SEPT4O43236 478 aa16.91■□□□□ 0.3
RTN3P1-201ENST00000536295 ORC4O43929 436 aa16.91■□□□□ 0.3
RTN3P1-201ENST00000536295 STAT2P52630 851 aa16.91■□□□□ 0.3
RTN3P1-201ENST00000536295 PPP4R3BQ5MIZ7 849 aa16.91■□□□□ 0.3
RTN3P1-201ENST00000536295 GJC2Q5T442 439 aaPredicted RBP16.91■□□□□ 0.3
RTN3P1-201ENST00000536295 RASGRP2Q7LDG7 609 aa16.91■□□□□ 0.3
RTN3P1-201ENST00000536295 TICAM2Q86XR7 235 aa16.91■□□□□ 0.3
RTN3P1-201ENST00000536295 DDX11Q96FC9 970 aa16.91■□□□□ 0.3
RTN3P1-201ENST00000536295 TINF2Q9BSI4 451 aa16.91■□□□□ 0.3
RTN3P1-201ENST00000536295 OSBPL3Q9H4L5 887 aa16.91■□□□□ 0.3
RTN3P1-201ENST00000536295 PCDH10Q9P2E7 1040 aa16.91■□□□□ 0.3
RTN3P1-201ENST00000536295 ZNFX1Q9P2E3 1918 aaKnown RBP16.9■□□□□ 0.3
RTN3P1-201ENST00000536295 DNM1LO00429 736 aa16.9■□□□□ 0.3
RTN3P1-201ENST00000536295 ATN1P54259 1190 aaPredicted RBP16.9■□□□□ 0.3
RTN3P1-201ENST00000536295 CWC27Q6UX04 472 aaKnown RBP16.9■□□□□ 0.3
RTN3P1-201ENST00000536295 KCTD1Q719H9 257 aa16.9■□□□□ 0.3
RTN3P1-201ENST00000536295 GMCL1Q96IK5 515 aa16.9■□□□□ 0.3
RTN3P1-201ENST00000536295 PRO3102Q9H379 93 aa16.9■□□□□ 0.3
RTN3P1-201ENST00000536295 HOMER2Q9NSB8 354 aa16.9■□□□□ 0.3
RTN3P1-201ENST00000536295 DIAPH3Q9NSV4 1193 aa16.9■□□□□ 0.3
RTN3P1-201ENST00000536295 DIS3Q9Y2L1 958 aaKnown RBP16.9■□□□□ 0.3
RTN3P1-201ENST00000536295 ATP2A1O14983 1001 aa16.89■□□□□ 0.29
RTN3P1-201ENST00000536295 TAL1P17542 331 aaPredicted RBP16.89■□□□□ 0.29
RTN3P1-201ENST00000536295 MFAP1P55081 439 aaKnown RBP16.89■□□□□ 0.29
RTN3P1-201ENST00000536295 FAM160B2Q86V87 743 aa16.89■□□□□ 0.29
RTN3P1-201ENST00000536295 ANKRD35Q8N283 1001 aa16.89■□□□□ 0.29
RTN3P1-201ENST00000536295 ARRDC4Q8NCT1 418 aa16.89■□□□□ 0.29
RTN3P1-201ENST00000536295 CHURC1Q8WUH1 139 aa16.89■□□□□ 0.29
RTN3P1-201ENST00000536295 STAG1Q8WVM7 1258 aa16.89■□□□□ 0.29
RTN3P1-201ENST00000536295 KBTBD13C9JR72 458 aa16.88■□□□□ 0.29
RTN3P1-201ENST00000536295 FGRP09769 529 aa16.88■□□□□ 0.29
RTN3P1-201ENST00000536295 OAZ1P54368 228 aa16.88■□□□□ 0.29
RTN3P1-201ENST00000536295 SNAP25P60880 206 aa16.88■□□□□ 0.29
RTN3P1-201ENST00000536295 CCDC96Q2M329 555 aa16.88■□□□□ 0.29
RTN3P1-201ENST00000536295 RCSD1Q6JBY9 416 aa16.88■□□□□ 0.29
RTN3P1-201ENST00000536295 CNPY2Q9Y2B0 182 aa16.88■□□□□ 0.29
RTN3P1-201ENST00000536295 ZMYM6O95789 1325 aa16.88■□□□□ 0.29
RTN3P1-201ENST00000536295 TRIOBPQ9H2D6 2365 aa16.87■□□□□ 0.29
RTN3P1-201ENST00000536295 PLXNA1Q9UIW2 1896 aa16.87■□□□□ 0.29
RTN3P1-201ENST00000536295 CCDC174Q6PII3 467 aa16.87■□□□□ 0.29
RTN3P1-201ENST00000536295 MFSD6Q6ZSS7 791 aa16.87■□□□□ 0.29
RTN3P1-201ENST00000536295 TBC1D10CQ8IV04 446 aa16.87■□□□□ 0.29
RTN3P1-201ENST00000536295 CHST13Q8NET6 341 aa16.87■□□□□ 0.29
RTN3P1-201ENST00000536295 AGBL1Q96MI9 1066 aa16.87■□□□□ 0.29
RTN3P1-201ENST00000536295 FBXO40Q9UH90 709 aa16.87■□□□□ 0.29
RTN3P1-201ENST00000536295 NRBP1Q9UHY1 535 aa16.87■□□□□ 0.29
RTN3P1-201ENST00000536295 DNAJC25-GNG10A0A024R161 153 aa16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 FDX1P10109 184 aa16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 RARBP10826 455 aa16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 MAGEA10P43363 369 aaPredicted RBP16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 LRRC41Q15345 812 aa16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 AKNAD1Q5T1N1 836 aa16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 FERMT2Q96AC1 680 aa16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 LENG1Q96BZ8 264 aaPredicted RBP16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 GDF15Q99988 308 aa16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 TMEM47Q9BQJ4 181 aa16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 XPNPEP3Q9NQH7 507 aa16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 ZHX1Q9UKY1 873 aaPredicted RBP16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 PRR12Q9ULL5 1215 aa16.86■□□□□ 0.29
RTN3P1-201ENST00000536295 HIP1O00291 1037 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 ZNF213O14771 459 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 PGK1P00558 417 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 ZNF865P0CJ78 1059 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms