RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 LRRC2Q9BYS8 371 aa13.27□□□□□ -0.29
TNFRSF1A-208ENST00000536194 LY9Q9HBG7 655 aa13.27□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SLC38A10Q9HBR0 1119 aa13.27□□□□□ -0.29
TNFRSF1A-208ENST00000536194 GJD2Q9UKL4 321 aa13.27□□□□□ -0.29
TNFRSF1A-208ENST00000536194 PRR12Q9ULL5 1215 aa13.27□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ISY1Q9ULR0 285 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-208ENST00000536194 MYH6P13533 1939 aa13.27□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SH2B2O14492 632 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ZNF536O15090 1300 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ZKSCAN1P17029 563 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ERCC3P19447 782 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 MAPK4P31152 587 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 MCM5P33992 734 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 FLT3LGP49771 235 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SNAP25P60880 206 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CCNA1P78396 465 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 EXOSC10Q01780 885 aaKnown RBP13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 PLS1Q14651 629 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 WTAPQ15007 396 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ARHGEF6Q15052 776 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 BTNL9Q6UXG8 535 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 FAM160B2Q86V87 743 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CHURC1Q8WUH1 139 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CPVLQ9H3G5 476 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 PLXNA1Q9UIW2 1896 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 HPS5Q9UPZ3 1129 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 RIPK3Q9Y572 518 aa13.26□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ERICH2A1L162 156 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ATP2A1O14983 1001 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CPA1P15085 419 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 PRMT2P55345 433 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 TROAPQ12815 778 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 IKQ13123 557 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 KRT32Q14532 448 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 MORN1Q5T089 497 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 PLEKHH3Q7Z736 793 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 RIOX2Q8IUF8 465 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SHCBP1Q8NEM2 672 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 USP6NLQ92738 828 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 COA7Q96BR5 231 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ABHD8Q96I13 439 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 TMEM87BQ96K49 555 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 MTA3Q9BTC8 594 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 RAVER2Q9HCJ3 691 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 LCTP09848 1927 aa13.25□□□□□ -0.29
TNFRSF1A-208ENST00000536194 WDR19Q8NEZ3 1342 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 TAL1P17542 331 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 HOXD10P28358 340 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 STAT3P40763 770 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SART3Q15020 963 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SLC35G1Q2M3R5 365 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 GPATCH4Q5T3I0 446 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SYDE2Q5VT97 1194 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 WDR78Q5VTH9 848 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SNRNP48Q6IEG0 339 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 DHX32Q7L7V1 743 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 NCAPG2Q86XI2 1143 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CPXCR1Q8N123 301 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 JAKMIP1Q96N16 626 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 MYL10Q9BUA6 226 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 TEX13BQ9BXU2 312 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 UBA5Q9GZZ9 404 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 RANBP17Q9H2T7 1088 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 MAD2L2Q9UI95 211 aa13.24□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ZBED4O75132 1171 aa13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 PTPREP23469 700 aa13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 IRF5Q13568 498 aa13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 GRB14Q14449 540 aa13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 GRM4Q14833 912 aa13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ASPRV1Q53RT3 343 aa13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CCAR1Q8IX12 1150 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ZNF654Q8IZM8 581 aa13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 RAET1EQ8TD07 263 aa13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SH3TC2Q8TF17 1288 aa13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 AGBL1Q96MI9 1066 aa13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 MROH8Q9H579 483 aa13.23□□□□□ -0.29
TNFRSF1A-208ENST00000536194 BAZ2BQ9UIF8 2168 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 RBBP6Q7Z6E9 1792 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 PALM3A6NDB9 673 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SLC15A5A6NIM6 579 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SLC25A27O95847 323 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 PARP1P09874 1014 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 FDX1P10109 184 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ELNP15502 786 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 LIFRP42702 1097 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 OAZ1P54368 228 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CCDC174Q6PII3 467 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 NBPF11Q86T75 865 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SGMS1Q86VZ5 419 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ADGRF4Q8IZF3 695 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 NPLOC4Q8TAT6 608 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 SOCS4Q8WXH5 440 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 NUDT12Q9BQG2 462 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 CENPFP49454 3210 aa13.22□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ADCY3O60266 1144 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 COBLO75128 1261 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 DDAH1O94760 285 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 ICAM1P05362 532 aa13.21□□□□□ -0.29
TNFRSF1A-208ENST00000536194 HMGB1P09429 215 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms