RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CCDC148Q8NFR7 591 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 DISC1Q9NRI5 854 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 MAD2L2Q9UI95 211 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 TTF2Q9UNY4 1162 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 KCNJ18B7U540 433 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 LAD1O00515 517 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 PPP4CP60510 307 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 GSTO1P78417 241 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 KCNJ12Q14500 433 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 WWC2Q6AWC2 1192 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 SMIM5Q71RC9 77 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 GPKOWQ92917 476 aaPredicted RBP eCLIP18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 IRX2Q9BZI1 471 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 FAM205AQ6ZU69 1335 aa18.08■□□□□ 0.49
CHMP1A-202ENST00000535997 PRCPP42785 496 aa18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 KCNB1Q14721 858 aa18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 ZNF771Q7L3S4 317 aaPredicted RBP18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 ZNF444Q8N0Y2 327 aaPredicted RBP18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 LZTS2Q9BRK4 669 aa18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 VPS16Q9H269 839 aa18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 PCDHA6Q9UN73 950 aa18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 JAG2Q9Y219 1238 aa18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 LEMD3Q9Y2U8 911 aa18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 PCDHA8Q9Y5H6 950 aa18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 ROBO3Q96MS0 1386 aa18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 MAST2Q6P0Q8 1798 aa18.08■□□□□ 0.48
CHMP1A-202ENST00000535997 TSPY3P0CV98 308 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 TSPY8P0CW00 308 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 CDC25AP30304 524 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 TUBB4BP68371 445 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 ADSSL1Q8N142 457 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 GOLGA1Q92805 767 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 DYNLL2Q96FJ2 89 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 CCSER1Q9C0I3 900 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 ABHD10Q9NUJ1 306 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 BARHL2Q9NY43 387 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 UBA7P41226 1012 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 FAM98CQ17RN3 349 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 NAALADL2Q58DX5 795 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 JAKMIP3Q5VZ66 844 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 TYW1BQ6NUM6 668 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 CYP26C1Q6V0L0 522 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 CREBRFQ8IUR6 639 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 SH3RF3Q8TEJ3 882 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 ANKIB1Q9P2G1 1089 aa18.07■□□□□ 0.48
CHMP1A-202ENST00000535997 COBLO75128 1261 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 PRPHP41219 470 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 NUP88Q99567 741 aaPredicted RBP18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 ZNF287Q9HBT7 754 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 CDC23Q9UJX2 597 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 PALM3A6NDB9 673 aaPredicted RBP18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 GNPATO15228 680 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 LDHCP07864 332 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 PLA2G4AP47712 749 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 TEX35Q5T0J7 233 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 CCDC24Q8N4L8 307 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 RASGRP4Q8TDF6 673 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 PARD6BQ9BYG5 372 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 KBTBD4Q9NVX7 518 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 TAB2Q9NYJ8 693 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 MYO1AQ9UBC5 1043 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 GDAQ9Y2T3 454 aa18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 RTCBQ9Y3I0 505 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-202ENST00000535997 USP17L3A6NCW0 530 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 USP17L4A6NCW7 530 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 CYTH3O43739 400 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 SLC4A8Q2Y0W8 1093 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 CC2D1AQ6P1N0 951 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 USP17L1Q7RTZ2 530 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 SRGAP1Q7Z6B7 1085 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 CERS3Q8IU89 383 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 CEP112Q8N8E3 955 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 COL24A1Q17RW2 1714 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 EEF1GP26641 437 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 UBXN1Q04323 297 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 STIM1Q13586 685 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 INF2Q27J81 1249 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 ZNF569Q5MCW4 686 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 IRF2BP1Q8IU81 584 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 TMEM47Q9BQJ4 181 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 TMEM60Q9H2L4 133 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 CUEDC2Q9H467 287 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 ARFGAP3Q9NP61 516 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 MAPK8IP1Q9UQF2 711 aa18.05■□□□□ 0.48
CHMP1A-202ENST00000535997 CTAGE9A4FU28 777 aa18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 RNF225M0QZC1 329 aaPredicted RBP18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 STXBP3O00186 592 aa18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 PARP1P09874 1014 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 KRT9P35527 623 aa18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 ERVK-24P63145 666 aa18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 HEATR3Q7Z4Q2 680 aa18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 RASSF8Q8NHQ8 419 aa18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 TGFBRAP1Q8WUH2 860 aa18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 ARHGEF1Q92888 912 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 AK8Q96MA6 479 aa18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 EPC1Q9H2F5 836 aa18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 MYH8P13535 1937 aa18.04■□□□□ 0.48
CHMP1A-202ENST00000535997 A0A1W2PQC6 194 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 RHOBTB3O94955 611 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 CHMP4BP1P59074 171 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms