RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 NTRK3Q16288 839 aa18.84■□□□□ 0.61
VAMP1-205ENST00000535927 MB21D1Q8N884 522 aa18.84■□□□□ 0.61
VAMP1-205ENST00000535927 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
VAMP1-205ENST00000535927 MYL10Q9BUA6 226 aa18.84■□□□□ 0.61
VAMP1-205ENST00000535927 STK36Q9NRP7 1315 aa18.83■□□□□ 0.61
VAMP1-205ENST00000535927 FAM155AB1AL88 458 aaPredicted RBP18.83■□□□□ 0.6
VAMP1-205ENST00000535927 hCG_1984214I3L0E3 225 aa18.83■□□□□ 0.6
VAMP1-205ENST00000535927 PRPF3O43395 683 aaKnown RBP18.83■□□□□ 0.6
VAMP1-205ENST00000535927 CDC27P30260 824 aa18.83■□□□□ 0.6
VAMP1-205ENST00000535927 ADD1P35611 737 aaKnown RBP18.83■□□□□ 0.6
VAMP1-205ENST00000535927 TM4SF4P48230 202 aa18.83■□□□□ 0.6
VAMP1-205ENST00000535927 SSRP1Q08945 709 aaKnown RBP18.83■□□□□ 0.6
VAMP1-205ENST00000535927 ZYXQ15942 572 aaKnown RBP18.83■□□□□ 0.6
VAMP1-205ENST00000535927 FAM83BQ5T0W9 1011 aa18.83■□□□□ 0.6
VAMP1-205ENST00000535927 LBX2Q6XYB7 198 aa18.83■□□□□ 0.6
VAMP1-205ENST00000535927 NOL8Q76FK4 1167 aaKnown RBP18.83■□□□□ 0.6
VAMP1-205ENST00000535927 SPICE1Q8N0Z3 855 aa18.83■□□□□ 0.6
VAMP1-205ENST00000535927 ZNF713Q8N859 430 aaPredicted RBP18.83■□□□□ 0.6
VAMP1-205ENST00000535927 SLF1Q9BQI6 1058 aa18.83■□□□□ 0.6
VAMP1-205ENST00000535927 MAF1Q9H063 256 aa18.83■□□□□ 0.6
VAMP1-205ENST00000535927 RPAP3Q9H6T3 665 aaPredicted RBP18.83■□□□□ 0.6
VAMP1-205ENST00000535927 CWC22Q9HCG8 908 aaKnown RBP18.83■□□□□ 0.6
VAMP1-205ENST00000535927 ADAMTS5Q9UNA0 930 aa18.83■□□□□ 0.6
VAMP1-205ENST00000535927 CCL15-CCL14A0A0B4J2E2 113 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 ALDH1A1P00352 501 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 OAZ1P54368 228 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 STK3Q13188 491 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 MOGSQ13724 837 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 CCL15Q16663 113 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 KIAA1755Q5JYT7 1200 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 SYDE2Q5VT97 1194 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 GADL1Q6ZQY3 521 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 KCTD1Q719H9 257 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 MTMR8Q96EF0 704 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 RRP36Q96EU6 259 aaKnown RBP18.82■□□□□ 0.6
VAMP1-205ENST00000535927 LARP6Q9BRS8 491 aaKnown RBP18.82■□□□□ 0.6
VAMP1-205ENST00000535927 TANGO6Q9C0B7 1094 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 PPP1R9AQ9ULJ8 1098 aa18.82■□□□□ 0.6
VAMP1-205ENST00000535927 FLOT1O75955 427 aa18.81■□□□□ 0.6
VAMP1-205ENST00000535927 FMNL1O95466 1100 aaPredicted RBP18.81■□□□□ 0.6
VAMP1-205ENST00000535927 HSP90AA1P07900 732 aaKnown RBP18.81■□□□□ 0.6
VAMP1-205ENST00000535927 DSG3P32926 999 aa18.81■□□□□ 0.6
VAMP1-205ENST00000535927 IRX3P78415 501 aaPredicted RBP18.81■□□□□ 0.6
VAMP1-205ENST00000535927 MAP2K1Q02750 393 aaPredicted RBP18.81■□□□□ 0.6
VAMP1-205ENST00000535927 FUT2Q10981 343 aa18.81■□□□□ 0.6
VAMP1-205ENST00000535927 IKQ13123 557 aaPredicted RBP18.81■□□□□ 0.6
VAMP1-205ENST00000535927 CCDC83Q8IWF9 413 aa18.81■□□□□ 0.6
VAMP1-205ENST00000535927 STAG2Q8N3U4 1231 aa18.81■□□□□ 0.6
VAMP1-205ENST00000535927 SRBD1Q8N5C6 995 aaKnown RBP18.81■□□□□ 0.6
VAMP1-205ENST00000535927 SMARCC2Q8TAQ2 1214 aa18.81■□□□□ 0.6
VAMP1-205ENST00000535927 GPCPD1Q9NPB8 672 aa18.81■□□□□ 0.6
VAMP1-205ENST00000535927 SEC63Q9UGP8 760 aaKnown RBP18.81■□□□□ 0.6
VAMP1-205ENST00000535927 MTMR7Q9Y216 660 aa18.81■□□□□ 0.6
VAMP1-205ENST00000535927 PNMA6FA0A0J9YX94 578 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 ATP2A1O14983 1001 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 ZBED4O75132 1171 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 DEXIO95424 95 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 LARGE1O95461 756 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 XBP1P17861 261 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 RXRAP19793 462 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 GCLCP48506 637 aaPredicted RBP18.8■□□□□ 0.6
VAMP1-205ENST00000535927 GPAT2Q6NUI2 795 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 CCDC144CPQ8IYA2 1237 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 ADGRF4Q8IZF3 695 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 NECAB1Q8N987 351 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 NSUN7Q8NE18 718 aaKnown RBP18.8■□□□□ 0.6
VAMP1-205ENST00000535927 CAPNS2Q96L46 248 aa18.8■□□□□ 0.6
VAMP1-205ENST00000535927 FRMPD2Q68DX3 1309 aaPredicted RBP18.79■□□□□ 0.6
VAMP1-205ENST00000535927 MYH6P13533 1939 aa18.79■□□□□ 0.6
VAMP1-205ENST00000535927 ZBTB5O15062 677 aa18.79■□□□□ 0.6
VAMP1-205ENST00000535927 GOLGA8HP0CJ92 632 aa18.79■□□□□ 0.6
VAMP1-205ENST00000535927 PDCP20941 246 aa18.79■□□□□ 0.6
VAMP1-205ENST00000535927 NBPF11Q86T75 865 aa18.79■□□□□ 0.6
VAMP1-205ENST00000535927 BRI3BPQ8WY22 251 aa18.79■□□□□ 0.6
VAMP1-205ENST00000535927 ABHD8Q96I13 439 aa18.79■□□□□ 0.6
VAMP1-205ENST00000535927 NCOA5Q9HCD5 579 aaKnown RBP18.79■□□□□ 0.6
VAMP1-205ENST00000535927 SH3GLB2Q9NR46 395 aa18.79■□□□□ 0.6
VAMP1-205ENST00000535927 PRR12Q9ULL5 1215 aa18.79■□□□□ 0.6
VAMP1-205ENST00000535927 ISY1Q9ULR0 285 aaKnown RBP18.79■□□□□ 0.6
VAMP1-205ENST00000535927 SMC3Q9UQE7 1217 aa18.79■□□□□ 0.6
VAMP1-205ENST00000535927 CTDP1Q9Y5B0 961 aaPredicted RBP18.79■□□□□ 0.6
VAMP1-205ENST00000535927 BAZ2BQ9UIF8 2168 aaKnown RBP18.78■□□□□ 0.6
VAMP1-205ENST00000535927 HSPA8P11142 646 aaKnown RBP18.78■□□□□ 0.6
VAMP1-205ENST00000535927 COPB2P35606 906 aa18.78■□□□□ 0.6
VAMP1-205ENST00000535927 SAMD3Q8N6K7 520 aa18.78■□□□□ 0.6
VAMP1-205ENST00000535927 CCDC12Q8WUD4 166 aaPredicted RBP18.78■□□□□ 0.6
VAMP1-205ENST00000535927 PARK7Q99497 189 aaKnown RBP18.78■□□□□ 0.6
VAMP1-205ENST00000535927 NUP88Q99567 741 aaPredicted RBP18.78■□□□□ 0.6
VAMP1-205ENST00000535927 GLT8D2Q9H1C3 349 aa18.78■□□□□ 0.6
VAMP1-205ENST00000535927 ASCC2Q9H1I8 757 aaPredicted RBP18.78■□□□□ 0.6
VAMP1-205ENST00000535927 RANBP17Q9H2T7 1088 aaKnown RBP18.78■□□□□ 0.6
VAMP1-205ENST00000535927 JMJD4Q9H9V9 463 aa18.78■□□□□ 0.6
VAMP1-205ENST00000535927 SLC38A10Q9HBR0 1119 aa18.78■□□□□ 0.6
VAMP1-205ENST00000535927 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.78■□□□□ 0.6
VAMP1-205ENST00000535927 V9GY48 417 aaPredicted RBP18.78■□□□□ 0.6
VAMP1-205ENST00000535927 CNTNAP5Q8WYK1 1306 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 WDR33Q9C0J8 1336 aaKnown RBP18.77■□□□□ 0.6
VAMP1-205ENST00000535927 PARP14Q460N5 1801 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 BTBD19C9JJ37 291 aa18.77■□□□□ 0.6
VAMP1-205ENST00000535927 PDHXO00330 501 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms