RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 NEDD1Q8NHV4 660 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 RILPL2Q969X0 211 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 NUP88Q99567 741 aaPredicted RBP10.51□□□□□ -0.73
CHD4-204ENST00000535810 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHD4-204ENST00000535810 MTMR4Q9NYA4 1195 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 PPP1R9AQ9ULJ8 1098 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 SYNPO2Q9UMS6 1093 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 ADAMTS5Q9UNA0 930 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHD4-204ENST00000535810 ZMYM6O95789 1325 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 CCDC171Q6TFL3 1326 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 ZNF236Q9UL36 1845 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 SLC15A5A6NIM6 579 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 F5H6K3 240 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 TTLL1O95922 423 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 HOXC6P09630 235 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 TSPY3P0CV98 308 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 TSPY8P0CW00 308 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 HSPD1P10809 573 aaKnown RBP10.5□□□□□ -0.73
CHD4-204ENST00000535810 ERCC3P19447 782 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 SDSP20132 328 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 PTPREP23469 700 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 CTDSPL2Q05D32 466 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 KLRC3Q07444 240 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 TMEM132BQ14DG7 1078 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 ALX1Q15699 326 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 TRMT44Q8IYL2 757 aaKnown RBP10.5□□□□□ -0.73
CHD4-204ENST00000535810 LRRC47Q8N1G4 583 aaKnown RBP10.5□□□□□ -0.73
CHD4-204ENST00000535810 SHCBP1Q8NEM2 672 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 DPF3Q92784 378 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 MKL1Q969V6 931 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 CRISPLD2Q9H0B8 497 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 CLIP2Q9UDT6 1046 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 ANAPC4Q9UJX5 808 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 TACC3Q9Y6A5 838 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 IVNS1ABPQ9Y6Y0 642 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 RPTORQ8N122 1335 aa10.5□□□□□ -0.73
CHD4-204ENST00000535810 MYH4Q9Y623 1939 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 VWA5AO00534 786 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 FARP2O94887 1054 aaPredicted RBP10.49□□□□□ -0.73
CHD4-204ENST00000535810 FGAP02671 866 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 FGRP09769 529 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 PDE4AP27815 886 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 TFAP4Q01664 338 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 PLS1Q14651 629 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 ASTLQ6HA08 431 aaPredicted RBP10.49□□□□□ -0.73
CHD4-204ENST00000535810 GMCL1P1Q8NEA9 526 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 REPS2Q8NFH8 660 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 SLF1Q9BQI6 1058 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 MROH8Q9H579 483 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 HMX1Q9NP08 348 aaPredicted RBP10.49□□□□□ -0.73
CHD4-204ENST00000535810 INCENPQ9NQS7 918 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 FLRT1Q9NZU1 646 aa10.49□□□□□ -0.73
CHD4-204ENST00000535810 ZNF214Q9UL59 606 aaPredicted RBP10.49□□□□□ -0.73
CHD4-204ENST00000535810 TSPY2A6NKD2 308 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 STRNO43815 780 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 ORC4O43929 436 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 IGHA2P01877 340 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 TFRCP02786 760 aaKnown RBP10.48□□□□□ -0.73
CHD4-204ENST00000535810 ADORA2AP29274 412 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 CACNB2Q08289 660 aaPredicted RBP10.48□□□□□ -0.73
CHD4-204ENST00000535810 GPR153Q6NV75 609 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 CWC27Q6UX04 472 aaKnown RBP10.48□□□□□ -0.73
CHD4-204ENST00000535810 NCAPG2Q86XI2 1143 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 ABRAQ8N0Z2 381 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 NPLOC4Q8TAT6 608 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 NBPF3Q9H094 633 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 IL17RBQ9NRM6 502 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 DIAPH3Q9NSV4 1193 aa10.48□□□□□ -0.73
CHD4-204ENST00000535810 COL11A1P12107 1806 aaPredicted RBP10.48□□□□□ -0.73
CHD4-204ENST00000535810 RANBP6O60518 1105 aaKnown RBP10.47□□□□□ -0.73
CHD4-204ENST00000535810 NMT2O60551 498 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 COBLO75128 1261 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 SLC25A27O95847 323 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 GSPT1P15170 499 aaKnown RBP10.47□□□□□ -0.73
CHD4-204ENST00000535810 CAPN2P17655 700 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 CCND3P30281 292 aaPredicted RBP10.47□□□□□ -0.73
CHD4-204ENST00000535810 STAT3P40763 770 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 NOVP48745 357 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 MFAP1P55081 439 aaKnown RBP10.47□□□□□ -0.73
CHD4-204ENST00000535810 PPP4R3BQ5MIZ7 849 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 TTC22Q5TAA0 569 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 SLFN13Q68D06 897 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 RIOX2Q8IUF8 465 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 HTATIP2Q9BUP3 242 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 TEX13BQ9BXU2 312 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 STX8Q9UNK0 236 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 NR2E3Q9Y5X4 410 aa10.47□□□□□ -0.73
CHD4-204ENST00000535810 DNAH12Q6ZR08 3092 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 HIP1O00291 1037 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 NEFLP07196 543 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 PRKCSHP14314 528 aaPredicted RBP10.46□□□□□ -0.73
CHD4-204ENST00000535810 CYP2C19P33261 490 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 HAND2P61296 217 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 MFSD14CQ5VZR4 134 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 OLFML2BQ68BL8 750 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 DPP9Q86TI2 863 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 TBC1D10CQ8IV04 446 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 ANKLE1Q8NAG6 615 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 PRPF38AQ8NAV1 312 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms