RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 HMX2A2RU54 273 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 WDR64B1ANS9 1081 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 PDPK1O15530 556 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 TOM1O60784 492 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 SLITRK5O94991 958 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 LONRF2Q1L5Z9 754 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 NBPF9Q3BBW0 867 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 KIAA1211LQ6NV74 962 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 CDH24Q86UP0 819 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 C7orf61Q8IZ16 206 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 FBXL6Q8N531 539 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 BAHD1Q8TBE0 780 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-202ENST00000535689 NETO1Q8TDF5 533 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 MFSD14AQ96MC6 490 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 LNPKQ9C0E8 428 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 SEMA6BQ9H3T3 888 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 LGR6Q9HBX8 967 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 SUGT1Q9Y2Z0 365 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 RAPGEF2Q9Y4G8 1499 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 ZNF865P0CJ78 1059 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-202ENST00000535689 POU4F1Q01851 419 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 CDK5R2Q13319 367 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 AUHQ13825 339 aaKnown RBP4.76□□□□□ -1.65
SNHG1-202ENST00000535689 IFI16Q16666 785 aaKnown RBP4.76□□□□□ -1.65
SNHG1-202ENST00000535689 MTERF2Q49AM1 385 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 UHRF1BP1Q6BDS2 1440 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 SYNPOQ8N3V7 929 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 DNAJB8Q8NHS0 232 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 SHKBP1Q8TBC3 707 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 HNRNPLLQ8WVV9 542 aaKnown RBP4.76□□□□□ -1.65
SNHG1-202ENST00000535689 ASB11Q8WXH4 323 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 DEPDC7Q96QD5 511 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 DPH2Q9BQC3 489 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-202ENST00000535689 DSCC1Q9BVC3 393 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 CFAP74Q9C0B2 1584 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 FER1L4A9Z1Z3 1794 aa4.76□□□□□ -1.65
SNHG1-202ENST00000535689 ABCA9Q8IUA7 1624 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 DENND4BO75064 1496 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-202ENST00000535689 COBLO75128 1261 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 UBOX5O94941 541 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 EOMESO95936 686 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 FOSL1P15407 271 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 CCDC144BQ3MJ40 725 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 SV2CQ496J9 727 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 NKAPLQ5M9Q1 402 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 XP32Q5T750 250 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 TMPRSS7Q7RTY8 843 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 ZNF655Q8N720 491 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-202ENST00000535689 RCC1LQ96I51 464 aaKnown RBP4.75□□□□□ -1.65
SNHG1-202ENST00000535689 SLC26A8Q96RN1 970 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 GPR62Q9BZJ7 368 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 ANTXR1Q9H6X2 564 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 CDK11AQ9UQ88 783 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-202ENST00000535689 STRCQ7RTU9 1775 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 KIAA0556O60303 1618 aa4.75□□□□□ -1.65
SNHG1-202ENST00000535689 EFCAB5A4FU69 1503 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 TRBV23OR9-2A0A075B6M9 112 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 DYRK3O43781 588 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 CBX7O95931 251 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 GSNP06396 782 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 CEACAM5P06731 702 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 NAT1P18440 290 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 CD247P20963 164 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 GRB10Q13322 594 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 HSP90AA2PQ14568 343 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-202ENST00000535689 C6orf15Q6UXA7 325 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-202ENST00000535689 RUFY4Q6ZNE9 571 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 FAM169BQ8N8A8 192 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 DAGLBQ8NCG7 672 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 SYTL5Q8TDW5 730 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-202ENST00000535689 PPP1R13LQ8WUF5 828 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 HRASLS5Q96KN8 279 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 HAUS7Q99871 368 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 SLKQ9H2G2 1235 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-202ENST00000535689 VAV3Q9UKW4 847 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 MSRB2Q9Y3D2 182 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 FHOD1Q9Y613 1164 aa4.74□□□□□ -1.65
SNHG1-202ENST00000535689 FHOD3Q2V2M9 1422 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 SUSD5O60279 629 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 DNAJA2O60884 412 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 GJB6O95452 261 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 CPP00450 1065 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 F13BP05160 661 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 ACRP10323 421 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 ITIH2P19823 946 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 PCBP3P57721 371 aaKnown RBP4.73□□□□□ -1.65
SNHG1-202ENST00000535689 SERINC3Q13530 473 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 ZNF765Q7L2R6 523 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 TMEM192Q8IY95 271 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 BVESQ8NE79 360 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 ZSWIM2Q8NEG5 633 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 THAP3Q8WTV1 239 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-202ENST00000535689 PPP1R14AQ96A00 147 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 ST7Q9NRC1 585 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 CHST7Q9NS84 486 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 BSDC1Q9NW68 430 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-202ENST00000535689 RNF112Q9ULX5 631 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 ABCA8O94911 1581 aa4.73□□□□□ -1.65
SNHG1-202ENST00000535689 TTC37Q6PGP7 1564 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms