RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 MDM2Q00987 491 aaPredicted RBP20.84■□□□□ 0.93
HTATSF1-204ENST00000535601 FILIP1Q7Z7B0 1213 aa20.84■□□□□ 0.93
HTATSF1-204ENST00000535601 SMYD4Q8IYR2 804 aaPredicted RBP20.84■□□□□ 0.93
HTATSF1-204ENST00000535601 TTLL6Q8N841 843 aa20.84■□□□□ 0.93
HTATSF1-204ENST00000535601 FAM237AA0A1B0GTK4 181 aa20.83■□□□□ 0.93
HTATSF1-204ENST00000535601 KCNA3P22001 575 aa20.83■□□□□ 0.93
HTATSF1-204ENST00000535601 GNAQP50148 359 aa20.83■□□□□ 0.93
HTATSF1-204ENST00000535601 LARGE2Q8N3Y3 721 aa20.83■□□□□ 0.93
HTATSF1-204ENST00000535601 NUP88Q99567 741 aaPredicted RBP20.83■□□□□ 0.93
HTATSF1-204ENST00000535601 BLZF1Q9H2G9 400 aa20.83■□□□□ 0.93
HTATSF1-204ENST00000535601 SIPA1L1O43166 1804 aa20.83■□□□□ 0.93
HTATSF1-204ENST00000535601 SHTN1A0MZ66 631 aa20.83■□□□□ 0.93
HTATSF1-204ENST00000535601 CCDC178Q5BJE1 867 aa20.83■□□□□ 0.93
HTATSF1-204ENST00000535601 RRP36Q96EU6 259 aaKnown RBP20.83■□□□□ 0.93
HTATSF1-204ENST00000535601 PSMD14O00487 310 aa20.83■□□□□ 0.92
HTATSF1-204ENST00000535601 SEPT2Q15019 361 aa20.83■□□□□ 0.92
HTATSF1-204ENST00000535601 TIGD1Q96MW7 591 aa20.83■□□□□ 0.92
HTATSF1-204ENST00000535601 SEC63Q9UGP8 760 aaKnown RBP20.83■□□□□ 0.92
HTATSF1-204ENST00000535601 TUBE1Q9UJT0 475 aa20.83■□□□□ 0.92
HTATSF1-204ENST00000535601 TTLL1O95922 423 aa20.82■□□□□ 0.92
HTATSF1-204ENST00000535601 ATP2C1P98194 919 aaPredicted RBP20.82■□□□□ 0.92
HTATSF1-204ENST00000535601 NCAPHQ15003 741 aa20.82■□□□□ 0.92
HTATSF1-204ENST00000535601 LETM2Q2VYF4 491 aa20.82■□□□□ 0.92
HTATSF1-204ENST00000535601 MAN1B1Q9UKM7 699 aa20.82■□□□□ 0.92
HTATSF1-204ENST00000535601 SMC2O95347 1197 aa20.82■□□□□ 0.92
HTATSF1-204ENST00000535601 RRP1BQ14684 758 aaKnown RBP20.82■□□□□ 0.92
HTATSF1-204ENST00000535601 NAT10Q9H0A0 1025 aaKnown RBP20.82■□□□□ 0.92
HTATSF1-204ENST00000535601 SMCHD1A6NHR9 2005 aa20.81■□□□□ 0.92
HTATSF1-204ENST00000535601 M0R2N6 131 aa20.81■□□□□ 0.92
HTATSF1-204ENST00000535601 CALML3P27482 149 aa20.81■□□□□ 0.92
HTATSF1-204ENST00000535601 ZNF646O15015 1829 aaPredicted RBP20.81■□□□□ 0.92
HTATSF1-204ENST00000535601 IGKV6D-41A0A0C4DH26 115 aa20.81■□□□□ 0.92
HTATSF1-204ENST00000535601 USP17L10C9JJH3 530 aa20.81■□□□□ 0.92
HTATSF1-204ENST00000535601 SPZ1Q9BXG8 430 aa20.81■□□□□ 0.92
HTATSF1-204ENST00000535601 IFNKQ9P0W0 207 aa20.81■□□□□ 0.92
HTATSF1-204ENST00000535601 PPP1R11O60927 126 aaPredicted RBP20.8■□□□□ 0.92
HTATSF1-204ENST00000535601 IGSF3O75054 1194 aa20.8■□□□□ 0.92
HTATSF1-204ENST00000535601 EEF2P13639 858 aaKnown RBP20.8■□□□□ 0.92
HTATSF1-204ENST00000535601 UBE2SQ16763 222 aa20.8■□□□□ 0.92
HTATSF1-204ENST00000535601 KARSQ15046 597 aaKnown RBP20.8■□□□□ 0.92
HTATSF1-204ENST00000535601 CERKLQ49MI3 558 aaPredicted RBP20.8■□□□□ 0.92
HTATSF1-204ENST00000535601 KLHL10Q6JEL2 608 aa20.8■□□□□ 0.92
HTATSF1-204ENST00000535601 ADGRF4Q8IZF3 695 aa20.8■□□□□ 0.92
HTATSF1-204ENST00000535601 GJA10Q969M2 543 aa20.8■□□□□ 0.92
HTATSF1-204ENST00000535601 HSD3B7Q9H2F3 369 aa20.8■□□□□ 0.92
HTATSF1-204ENST00000535601 FMR1Q06787 632 aaKnown RBP eCLIP20.8■□□□□ 0.928e-11■■□□□ 12.1
HTATSF1-204ENST00000535601 TRIM34Q9BYJ4 488 aa20.8■□□□□ 0.92
HTATSF1-204ENST00000535601 SAMD1Q6SPF0 538 aaPredicted RBP20.79■□□□□ 0.92
HTATSF1-204ENST00000535601 SPICE1Q8N0Z3 855 aa20.79■□□□□ 0.92
HTATSF1-204ENST00000535601 C4orf32Q8N8J7 132 aa20.79■□□□□ 0.92
HTATSF1-204ENST00000535601 XPO4Q9C0E2 1151 aaKnown RBP20.79■□□□□ 0.92
HTATSF1-204ENST00000535601 VEZTQ9HBM0 779 aa20.79■□□□□ 0.92
HTATSF1-204ENST00000535601 CCNT1O60563 726 aaKnown RBP20.79■□□□□ 0.92
HTATSF1-204ENST00000535601 ZNF579Q8NAF0 562 aaKnown RBP20.79■□□□□ 0.92
HTATSF1-204ENST00000535601 DPF2Q92785 391 aa20.79■□□□□ 0.92
HTATSF1-204ENST00000535601 STX17P56962 302 aa20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 JMJD4Q9H9V9 463 aa20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 CCDC148Q8NFR7 591 aa20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 CACTINQ8WUQ7 758 aaKnown RBP20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 SMARCE1Q969G3 411 aa20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 PAGE5Q96GU1 130 aa20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 CSRNP1Q96S65 589 aa20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 FANCLQ9NW38 375 aa20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 RGPD3A6NKT7 1758 aaPredicted RBP20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 RGPD4Q7Z3J3 1758 aa20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 ZNF543Q08ER8 600 aa20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 SWAP70Q9UH65 585 aa20.78■□□□□ 0.92
HTATSF1-204ENST00000535601 CAVIN2O95810 425 aa20.77■□□□□ 0.92
HTATSF1-204ENST00000535601 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
HTATSF1-204ENST00000535601 SOGA3Q5TF21 947 aa20.77■□□□□ 0.92
HTATSF1-204ENST00000535601 CCDC84Q86UT8 332 aaPredicted RBP20.77■□□□□ 0.92
HTATSF1-204ENST00000535601 SIAH1Q8IUQ4 282 aa20.77■□□□□ 0.92
HTATSF1-204ENST00000535601 MTRQ99707 1265 aa20.77■□□□□ 0.92
HTATSF1-204ENST00000535601 ZMYND12Q9H0C1 365 aa20.77■□□□□ 0.92
HTATSF1-204ENST00000535601 SH3GLB2Q9NR46 395 aa20.77■□□□□ 0.92
HTATSF1-204ENST00000535601 PI4KBQ9UBF8 816 aa20.77■□□□□ 0.92
HTATSF1-204ENST00000535601 ZNF500O60304 480 aaPredicted RBP20.77■□□□□ 0.91
HTATSF1-204ENST00000535601 NOVP48745 357 aa20.77■□□□□ 0.91
HTATSF1-204ENST00000535601 MIGA2Q7L4E1 593 aa20.77■□□□□ 0.91
HTATSF1-204ENST00000535601 RASSF8Q8NHQ8 419 aa20.77■□□□□ 0.91
HTATSF1-204ENST00000535601 TBCKQ8TEA7 893 aa20.77■□□□□ 0.91
HTATSF1-204ENST00000535601 FERMT2Q96AC1 680 aa20.77■□□□□ 0.91
HTATSF1-204ENST00000535601 SERPINA10Q9UK55 444 aa20.77■□□□□ 0.91
HTATSF1-204ENST00000535601 GH2P01242 217 aa20.76■□□□□ 0.91
HTATSF1-204ENST00000535601 GOLGA8FQ08AF8 430 aa20.76■□□□□ 0.91
HTATSF1-204ENST00000535601 GOLGA8DPQ0D2H9 430 aa20.76■□□□□ 0.91
HTATSF1-204ENST00000535601 RIOX1Q9H6W3 641 aa20.76■□□□□ 0.91
HTATSF1-204ENST00000535601 C10orf71Q711Q0 1435 aa20.76■□□□□ 0.91
HTATSF1-204ENST00000535601 MED15Q96RN5 788 aa20.76■□□□□ 0.91
HTATSF1-204ENST00000535601 MAPK8IP1Q9UQF2 711 aa20.76■□□□□ 0.91
HTATSF1-204ENST00000535601 R3HCC1Q9Y3T6 440 aaKnown RBP20.76■□□□□ 0.91
HTATSF1-204ENST00000535601 PLIN4Q96Q06 1357 aa20.76■□□□□ 0.91
HTATSF1-204ENST00000535601 LRRC15Q8TF66 581 aa20.75■□□□□ 0.91
HTATSF1-204ENST00000535601 RBM26Q5T8P6 1007 aaKnown RBP20.75■□□□□ 0.91
HTATSF1-204ENST00000535601 LZTS2Q9BRK4 669 aa20.75■□□□□ 0.91
HTATSF1-204ENST00000535601 IDI2Q9BXS1 227 aa20.75■□□□□ 0.91
HTATSF1-204ENST00000535601 CD44P16070 742 aaKnown RBP20.75■□□□□ 0.91
HTATSF1-204ENST00000535601 TNNI2P48788 182 aa20.75■□□□□ 0.91
HTATSF1-204ENST00000535601 CUL4BQ13620 913 aa20.75■□□□□ 0.91
HTATSF1-204ENST00000535601 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms