RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 HEATR3Q7Z4Q2 680 aa26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 BRAPQ7Z569 592 aa26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 ANKRD13AQ8IZ07 590 aa26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 ZNF713Q8N859 430 aaPredicted RBP26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 CCDC148Q8NFR7 591 aa26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 BRMS1Q9HCU9 246 aa26.42■■□□□ 1.82
RBFOX1-206ENST00000535565 MCM4P33991 863 aa26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 MTMR2Q13614 643 aa26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 BTNL9Q6UXG8 535 aa26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 CCDC12Q8WUD4 166 aaPredicted RBP26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 PHF20Q9BVI0 1012 aa26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 BARHL2Q9NY43 387 aa26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 SNCAIPQ9Y6H5 919 aa26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 PNMA6FA0A0J9YX94 578 aa26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 WDR46O15213 610 aaKnown RBP26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 BACE1P56817 501 aa26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 SYDE2Q5VT97 1194 aa26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 WWC2Q6AWC2 1192 aa26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 CHURC1Q8WUH1 139 aa26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 GPKOWQ92917 476 aaPredicted RBP eCLIP26.41■■□□□ 1.82
RBFOX1-206ENST00000535565 DDX11L8A8MPP1 907 aa26.4■■□□□ 1.82
RBFOX1-206ENST00000535565 C19orf81C9J6K1 198 aa26.4■■□□□ 1.82
RBFOX1-206ENST00000535565 CALML3P27482 149 aa26.4■■□□□ 1.82
RBFOX1-206ENST00000535565 NLRP5P59047 1200 aa26.4■■□□□ 1.82
RBFOX1-206ENST00000535565 FAM160B2Q86V87 743 aa26.4■■□□□ 1.82
RBFOX1-206ENST00000535565 DIS3L2Q8IYB7 885 aaKnown RBP26.4■■□□□ 1.82
RBFOX1-206ENST00000535565 MTMR8Q96EF0 704 aa26.4■■□□□ 1.82
RBFOX1-206ENST00000535565 TRIM75PA6NK02 468 aa26.39■■□□□ 1.82
RBFOX1-206ENST00000535565 ZBTB5O15062 677 aa26.39■■□□□ 1.82
RBFOX1-206ENST00000535565 PLA2G6O60733 806 aa26.39■■□□□ 1.82
RBFOX1-206ENST00000535565 KRT2P35908 639 aa26.39■■□□□ 1.82
RBFOX1-206ENST00000535565 FOXP1Q9H334 677 aaPredicted RBP26.39■■□□□ 1.82
RBFOX1-206ENST00000535565 FEM1BQ9UK73 627 aa26.39■■□□□ 1.82
RBFOX1-206ENST00000535565 STXBP3O00186 592 aa26.38■■□□□ 1.81
RBFOX1-206ENST00000535565 NCLP19338 710 aaKnown RBP26.38■■□□□ 1.81
RBFOX1-206ENST00000535565 U2AF2P26368 475 aaKnown RBP eCLIP26.38■■□□□ 1.81
RBFOX1-206ENST00000535565 KRT85P78386 507 aa26.38■■□□□ 1.81
RBFOX1-206ENST00000535565 DNM1Q05193 864 aaKnown RBP26.38■■□□□ 1.81
RBFOX1-206ENST00000535565 TRAF5O00463 557 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 NAPAP54920 295 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 RBM46Q8TBY0 533 aaKnown RBP26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 SHISA4Q96DD7 197 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 ZNF408Q9H9D4 720 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 AFG3L2Q9Y4W6 797 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 PTPRFP10586 1907 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 KIF28PB7ZC32 967 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 PTMSP20962 102 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 CDC37Q16543 378 aaPredicted RBP26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 GALNT17Q6IS24 598 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 FAM173BQ6P4H8 233 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 CHAMP1Q96JM3 812 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 ZNF396Q96N95 335 aaPredicted RBP26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 PRR12Q9ULL5 1215 aa26.37■■□□□ 1.81
RBFOX1-206ENST00000535565 BTBD18B2RXH4 712 aa26.36■■□□□ 1.81
RBFOX1-206ENST00000535565 ATL3Q6DD88 541 aa26.36■■□□□ 1.81
RBFOX1-206ENST00000535565 PPP1R18Q6NYC8 613 aa26.36■■□□□ 1.81
RBFOX1-206ENST00000535565 MOB2Q70IA6 237 aa26.36■■□□□ 1.81
RBFOX1-206ENST00000535565 NOSTRINQ8IVI9 506 aa26.36■■□□□ 1.81
RBFOX1-206ENST00000535565 C12orf42Q96LP6 360 aa26.36■■□□□ 1.81
RBFOX1-206ENST00000535565 ELP3Q9H9T3 547 aa26.36■■□□□ 1.81
RBFOX1-206ENST00000535565 EMILIN3Q9NT22 766 aa26.36■■□□□ 1.81
RBFOX1-206ENST00000535565 TMOD4Q9NZQ9 345 aa26.36■■□□□ 1.81
RBFOX1-206ENST00000535565 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.36■■□□□ 1.81
RBFOX1-206ENST00000535565 UNCXA6NJT0 531 aa26.35■■□□□ 1.81
RBFOX1-206ENST00000535565 VCAM1P19320 739 aa26.35■■□□□ 1.81
RBFOX1-206ENST00000535565 PPATQ06203 517 aa26.35■■□□□ 1.81
RBFOX1-206ENST00000535565 CSPP1Q1MSJ5 1256 aa26.35■■□□□ 1.81
RBFOX1-206ENST00000535565 QRICH1Q2TAL8 776 aa26.35■■□□□ 1.81
RBFOX1-206ENST00000535565 ERO1BQ86YB8 467 aa26.35■■□□□ 1.81
RBFOX1-206ENST00000535565 CFAP45Q9UL16 551 aa26.35■■□□□ 1.81
RBFOX1-206ENST00000535565 CNPY2Q9Y2B0 182 aa26.35■■□□□ 1.81
RBFOX1-206ENST00000535565 HMGCS2P54868 508 aa26.34■■□□□ 1.81
RBFOX1-206ENST00000535565 FKBP1BP68106 108 aa26.34■■□□□ 1.81
RBFOX1-206ENST00000535565 KIFC2Q96AC6 838 aa26.34■■□□□ 1.81
RBFOX1-206ENST00000535565 TANGO6Q9C0B7 1094 aa26.34■■□□□ 1.81
RBFOX1-206ENST00000535565 PCDHA4Q9UN74 947 aa26.34■■□□□ 1.81
RBFOX1-206ENST00000535565 TRPM7Q96QT4 1865 aa26.33■■□□□ 1.81
RBFOX1-206ENST00000535565 GNA11P29992 359 aa26.33■■□□□ 1.81
RBFOX1-206ENST00000535565 MYSM1Q5VVJ2 828 aa26.33■■□□□ 1.81
RBFOX1-206ENST00000535565 TYW1BQ6NUM6 668 aa26.33■■□□□ 1.81
RBFOX1-206ENST00000535565 DAGLBQ8NCG7 672 aa26.33■■□□□ 1.81
RBFOX1-206ENST00000535565 CLMNQ96JQ2 1002 aa26.33■■□□□ 1.81
RBFOX1-206ENST00000535565 ZMYND12Q9H0C1 365 aa26.33■■□□□ 1.81
RBFOX1-206ENST00000535565 C6orf50Q9HD87 102 aa26.33■■□□□ 1.81
RBFOX1-206ENST00000535565 PARP14Q460N5 1801 aa26.33■■□□□ 1.81
RBFOX1-206ENST00000535565 ESYT2A0FGR8 921 aa26.33■■□□□ 1.8
RBFOX1-206ENST00000535565 SPDYE5A6NIY4 337 aa26.33■■□□□ 1.8
RBFOX1-206ENST00000535565 TRAF1Q13077 416 aa26.33■■□□□ 1.8
RBFOX1-206ENST00000535565 CHADLQ6NUI6 762 aa26.33■■□□□ 1.8
RBFOX1-206ENST00000535565 BLIDQ8IZY5 108 aa26.33■■□□□ 1.8
RBFOX1-206ENST00000535565 SCAND2PQ9GZW5 306 aaPredicted RBP26.33■■□□□ 1.8
RBFOX1-206ENST00000535565 RPAP3Q9H6T3 665 aaPredicted RBP26.33■■□□□ 1.8
RBFOX1-206ENST00000535565 SMCO2A6NFE2 343 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 FIBPO43427 364 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 NR5A1Q13285 461 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 DGKZQ13574 1117 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 NPY5RQ15761 445 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 SH3D19Q5HYK7 790 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 LDLRAD1Q5T700 205 aa26.32■■□□□ 1.8
RBFOX1-206ENST00000535565 PRPF38AQ8NAV1 312 aaKnown RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms