RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 SLC4A3P48751 1232 aa25.62■■□□□ 1.69
SSPN-204ENST00000535504 GPATCH4Q5T3I0 446 aaKnown RBP25.62■■□□□ 1.69
SSPN-204ENST00000535504 RIOX2Q8IUF8 465 aa25.62■■□□□ 1.69
SSPN-204ENST00000535504 CPXCR1Q8N123 301 aa25.62■■□□□ 1.69
SSPN-204ENST00000535504 PNMA1Q8ND90 353 aa25.62■■□□□ 1.69
SSPN-204ENST00000535504 A0A0G2JMZ2 1700 aa25.62■■□□□ 1.69
SSPN-204ENST00000535504 PARP14Q460N5 1801 aa25.61■■□□□ 1.69
SSPN-204ENST00000535504 IFIT3O14879 490 aaKnown RBP25.61■■□□□ 1.69
SSPN-204ENST00000535504 EIF5BO60841 1220 aaKnown RBP25.61■■□□□ 1.69
SSPN-204ENST00000535504 FCER1AP12319 257 aa25.61■■□□□ 1.69
SSPN-204ENST00000535504 PTPREP23469 700 aa25.61■■□□□ 1.69
SSPN-204ENST00000535504 OAZ1P54368 228 aa25.61■■□□□ 1.69
SSPN-204ENST00000535504 CREB3L3Q68CJ9 461 aa25.61■■□□□ 1.69
SSPN-204ENST00000535504 SNRNP48Q6IEG0 339 aaKnown RBP25.61■■□□□ 1.69
SSPN-204ENST00000535504 DPP9Q86TI2 863 aa25.61■■□□□ 1.69
SSPN-204ENST00000535504 ZNF333Q96JL9 665 aa25.61■■□□□ 1.69
SSPN-204ENST00000535504 APBA2Q99767 749 aa25.61■■□□□ 1.69
SSPN-204ENST00000535504 DOCK3Q8IZD9 2030 aa25.61■■□□□ 1.69
SSPN-204ENST00000535504 RLFQ13129 1914 aa25.61■■□□□ 1.69
SSPN-204ENST00000535504 SLC27A2O14975 620 aa25.6■■□□□ 1.69
SSPN-204ENST00000535504 XRCC5P13010 732 aaKnown RBP25.6■■□□□ 1.69
SSPN-204ENST00000535504 MAP2K5Q13163 448 aa25.6■■□□□ 1.69
SSPN-204ENST00000535504 KCTD2Q14681 263 aa25.6■■□□□ 1.69
SSPN-204ENST00000535504 POTEEQ6S8J3 1075 aa25.6■■□□□ 1.69
SSPN-204ENST00000535504 ENAHQ8N8S7 591 aaPredicted RBP25.6■■□□□ 1.69
SSPN-204ENST00000535504 ANKS1AQ92625 1134 aa25.6■■□□□ 1.69
SSPN-204ENST00000535504 SLC38A10Q9HBR0 1119 aa25.6■■□□□ 1.69
SSPN-204ENST00000535504 PNMA2Q9UL42 364 aa25.6■■□□□ 1.69
SSPN-204ENST00000535504 HMGCRP04035 888 aa25.59■■□□□ 1.69
SSPN-204ENST00000535504 PDHBP11177 359 aa25.59■■□□□ 1.69
SSPN-204ENST00000535504 KRT32Q14532 448 aa25.59■■□□□ 1.69
SSPN-204ENST00000535504 WTAPQ15007 396 aa25.59■■□□□ 1.69
SSPN-204ENST00000535504 GPCPD1Q9NPB8 672 aa25.59■■□□□ 1.69
SSPN-204ENST00000535504 FBXO40Q9UH90 709 aa25.59■■□□□ 1.69
SSPN-204ENST00000535504 GJD2Q9UKL4 321 aa25.59■■□□□ 1.69
SSPN-204ENST00000535504 FRMPD2Q68DX3 1309 aaPredicted RBP25.59■■□□□ 1.69
SSPN-204ENST00000535504 ATP2A1O14983 1001 aa25.58■■□□□ 1.69
SSPN-204ENST00000535504 MYCP01106 439 aaPredicted RBP25.58■■□□□ 1.69
SSPN-204ENST00000535504 ELNP15502 786 aa25.58■■□□□ 1.69
SSPN-204ENST00000535504 MCM5P33992 734 aa25.58■■□□□ 1.69
SSPN-204ENST00000535504 SOX10P56693 466 aa25.58■■□□□ 1.69
SSPN-204ENST00000535504 GRB14Q14449 540 aa25.58■■□□□ 1.69
SSPN-204ENST00000535504 NECTIN1Q15223 517 aa25.58■■□□□ 1.69
SSPN-204ENST00000535504 MORN1Q5T089 497 aa25.58■■□□□ 1.69
SSPN-204ENST00000535504 SYDE2Q5VT97 1194 aa25.58■■□□□ 1.69
SSPN-204ENST00000535504 ABRAQ8N0Z2 381 aa25.58■■□□□ 1.69
SSPN-204ENST00000535504 MMP19Q99542 508 aa25.58■■□□□ 1.69
SSPN-204ENST00000535504 ZNF214Q9UL59 606 aaPredicted RBP25.58■■□□□ 1.69
SSPN-204ENST00000535504 COL11A1P12107 1806 aaPredicted RBP25.58■■□□□ 1.68
SSPN-204ENST00000535504 PARP1P09874 1014 aaKnown RBP25.57■■□□□ 1.68
SSPN-204ENST00000535504 ASPRV1Q53RT3 343 aa25.57■■□□□ 1.68
SSPN-204ENST00000535504 TMEM67Q5HYA8 995 aa25.57■■□□□ 1.68
SSPN-204ENST00000535504 CYB5R4Q7L1T6 521 aa25.57■■□□□ 1.68
SSPN-204ENST00000535504 RAVER2Q9HCJ3 691 aaKnown RBP25.57■■□□□ 1.68
SSPN-204ENST00000535504 INHAP05111 366 aa25.56■■□□□ 1.68
SSPN-204ENST00000535504 ADORA2AP29274 412 aa25.56■■□□□ 1.68
SSPN-204ENST00000535504 ZNF543Q08ER8 600 aa25.56■■□□□ 1.68
SSPN-204ENST00000535504 TKFCQ3LXA3 575 aa25.56■■□□□ 1.68
SSPN-204ENST00000535504 MFSD14CQ5VZR4 134 aa25.56■■□□□ 1.68
SSPN-204ENST00000535504 REPS2Q8NFH8 660 aa25.56■■□□□ 1.68
SSPN-204ENST00000535504 MTA3Q9BTC8 594 aa25.56■■□□□ 1.68
SSPN-204ENST00000535504 PRR12Q9ULL5 1215 aa25.56■■□□□ 1.68
SSPN-204ENST00000535504 DHX16O60231 1041 aaKnown RBP25.55■■□□□ 1.68
SSPN-204ENST00000535504 CCDC174Q6PII3 467 aa25.55■■□□□ 1.68
SSPN-204ENST00000535504 BTNL9Q6UXG8 535 aa25.55■■□□□ 1.68
SSPN-204ENST00000535504 CATIPQ7Z7H3 387 aa25.55■■□□□ 1.68
SSPN-204ENST00000535504 TMTC2Q8N394 836 aa25.55■■□□□ 1.68
SSPN-204ENST00000535504 CHST13Q8NET6 341 aa25.55■■□□□ 1.68
SSPN-204ENST00000535504 NKX2-3Q8TAU0 364 aa25.55■■□□□ 1.68
SSPN-204ENST00000535504 DDX11Q96FC9 970 aa25.55■■□□□ 1.68
SSPN-204ENST00000535504 RNF208Q9H0X6 261 aa25.55■■□□□ 1.68
SSPN-204ENST00000535504 PLXNB2O15031 1838 aa25.54■■□□□ 1.68
SSPN-204ENST00000535504 SNHG28P0DPA3 235 aa25.54■■□□□ 1.68
SSPN-204ENST00000535504 NFXL1Q6ZNB6 911 aa25.54■■□□□ 1.68
SSPN-204ENST00000535504 STOX1Q6ZVD7 989 aa25.54■■□□□ 1.68
SSPN-204ENST00000535504 MB21D2Q8IYB1 491 aaPredicted RBP25.54■■□□□ 1.68
SSPN-204ENST00000535504 TMEM87BQ96K49 555 aa25.54■■□□□ 1.68
SSPN-204ENST00000535504 EPB41L2O43491 1005 aaKnown RBP25.53■■□□□ 1.68
SSPN-204ENST00000535504 PRC1O43663 620 aa25.53■■□□□ 1.68
SSPN-204ENST00000535504 HMGB1P09429 215 aaKnown RBP25.53■■□□□ 1.68
SSPN-204ENST00000535504 SLC16A2P36021 539 aa25.53■■□□□ 1.68
SSPN-204ENST00000535504 CCPG1Q9ULG6 757 aa25.53■■□□□ 1.68
SSPN-204ENST00000535504 CCDC69A6NI79 296 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 HOXC6P09630 235 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 CCL5P13501 91 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 SEC23AQ15436 765 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 TTBK2Q6IQ55 1244 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 RASGRP2Q7LDG7 609 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 CHST3Q7LGC8 479 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 ANKRD35Q8N283 1001 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 USP6NLQ92738 828 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 NEK1Q96PY6 1258 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 ACAD9Q9H845 621 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 HMX1Q9NP08 348 aaPredicted RBP25.52■■□□□ 1.68
SSPN-204ENST00000535504 HOMER2Q9NSB8 354 aa25.52■■□□□ 1.68
SSPN-204ENST00000535504 GOLGA8HP0CJ92 632 aa25.51■■□□□ 1.67
SSPN-204ENST00000535504 ALAS1P13196 640 aa25.51■■□□□ 1.67
SSPN-204ENST00000535504 CAPN2P17655 700 aa25.51■■□□□ 1.67
SSPN-204ENST00000535504 FGD1P98174 961 aa25.51■■□□□ 1.67
SSPN-204ENST00000535504 SYNE3Q6ZMZ3 975 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms