RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 KIFC2Q96AC6 838 aa14.04□□□□□ -0.16
KNTC1-208ENST00000535410 DDX11Q96FC9 970 aa14.04□□□□□ -0.16
KNTC1-208ENST00000535410 NUP88Q99567 741 aaPredicted RBP14.04□□□□□ -0.16
KNTC1-208ENST00000535410 DDX20Q9UHI6 824 aaKnown RBP14.04□□□□□ -0.16
KNTC1-208ENST00000535410 CTNNA3Q9UI47 895 aa14.04□□□□□ -0.16
KNTC1-208ENST00000535410 ZNF214Q9UL59 606 aaPredicted RBP14.04□□□□□ -0.16
KNTC1-208ENST00000535410 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.04□□□□□ -0.16
KNTC1-208ENST00000535410 A0A0D9SFI3 127 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 PLA2G6O60733 806 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 CCND3P30281 292 aaPredicted RBP14.03□□□□□ -0.16
KNTC1-208ENST00000535410 CYP2C19P33261 490 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 CCDC178Q5BJE1 867 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 VPS53Q5VIR6 699 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 SNRNP48Q6IEG0 339 aaKnown RBP14.03□□□□□ -0.16
KNTC1-208ENST00000535410 RCSD1Q6JBY9 416 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 LRRC47Q8N1G4 583 aaKnown RBP14.03□□□□□ -0.16
KNTC1-208ENST00000535410 CHST13Q8NET6 341 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 STAG1Q8WVM7 1258 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 TTC14Q96N46 770 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 SLC38A10Q9HBR0 1119 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 FLRT1Q9NZU1 646 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 CEP290O15078 2479 aa14.03□□□□□ -0.16
KNTC1-208ENST00000535410 TMEM232C9JQI7 657 aa14.02□□□□□ -0.17
KNTC1-208ENST00000535410 ZNF213O14771 459 aa14.02□□□□□ -0.17
KNTC1-208ENST00000535410 COBLO75128 1261 aa14.02□□□□□ -0.17
KNTC1-208ENST00000535410 RRP12Q5JTH9 1297 aaKnown RBP14.02□□□□□ -0.17
KNTC1-208ENST00000535410 HABP4Q5JVS0 413 aaKnown RBP14.02□□□□□ -0.17
KNTC1-208ENST00000535410 LHX8Q68G74 356 aa14.02□□□□□ -0.17
KNTC1-208ENST00000535410 CPXCR1Q8N123 301 aa14.02□□□□□ -0.17
KNTC1-208ENST00000535410 REPS2Q8NFH8 660 aa14.02□□□□□ -0.17
KNTC1-208ENST00000535410 RUFY2Q8WXA3 655 aa14.02□□□□□ -0.17
KNTC1-208ENST00000535410 MAML3Q96JK9 1138 aa14.02□□□□□ -0.17
KNTC1-208ENST00000535410 TCP11L1Q9NUJ3 509 aa14.02□□□□□ -0.17
KNTC1-208ENST00000535410 PNMA2Q9UL42 364 aa14.02□□□□□ -0.17
KNTC1-208ENST00000535410 FOXP2O15409 715 aa14.01□□□□□ -0.17
KNTC1-208ENST00000535410 SEPT4O43236 478 aa14.01□□□□□ -0.17
KNTC1-208ENST00000535410 TOP1P11387 765 aaKnown RBP14.01□□□□□ -0.17
KNTC1-208ENST00000535410 MCCP23508 829 aa14.01□□□□□ -0.17
KNTC1-208ENST00000535410 SLC4A3P48751 1232 aa14.01□□□□□ -0.17
KNTC1-208ENST00000535410 TKFCQ3LXA3 575 aa14.01□□□□□ -0.17
KNTC1-208ENST00000535410 AKNAD1Q5T1N1 836 aa14.01□□□□□ -0.17
KNTC1-208ENST00000535410 CWC27Q6UX04 472 aaKnown RBP14.01□□□□□ -0.17
KNTC1-208ENST00000535410 DCAF4Q8WV16 495 aa14.01□□□□□ -0.17
KNTC1-208ENST00000535410 ESR2Q92731 530 aa14.01□□□□□ -0.17
KNTC1-208ENST00000535410 CNPY2Q9Y2B0 182 aa14.01□□□□□ -0.17
KNTC1-208ENST00000535410 PLXNB2O15031 1838 aa14□□□□□ -0.17
KNTC1-208ENST00000535410 SLC34A2O95436 690 aa14□□□□□ -0.17
KNTC1-208ENST00000535410 IGHA2P01877 340 aa14□□□□□ -0.17
KNTC1-208ENST00000535410 CYBAP13498 195 aa14□□□□□ -0.17
KNTC1-208ENST00000535410 IMMTQ16891 758 aaKnown RBP14□□□□□ -0.17
KNTC1-208ENST00000535410 ZNF589Q86UQ0 364 aaPredicted RBP14□□□□□ -0.17
KNTC1-208ENST00000535410 ANKRD35Q8N283 1001 aa14□□□□□ -0.17
KNTC1-208ENST00000535410 DIS3LQ8TF46 1054 aaKnown RBP14□□□□□ -0.17
KNTC1-208ENST00000535410 TINF2Q9BSI4 451 aa14□□□□□ -0.17
KNTC1-208ENST00000535410 DSCC1Q9BVC3 393 aa14□□□□□ -0.17
KNTC1-208ENST00000535410 IL17RBQ9NRM6 502 aa14□□□□□ -0.17
KNTC1-208ENST00000535410 KBTBD13C9JR72 458 aa13.99□□□□□ -0.17
KNTC1-208ENST00000535410 DNM1LO00429 736 aa13.99□□□□□ -0.17
KNTC1-208ENST00000535410 PGK2P07205 417 aa13.99□□□□□ -0.17
KNTC1-208ENST00000535410 NOVP48745 357 aa13.99□□□□□ -0.17
KNTC1-208ENST00000535410 ZNF792Q3KQV3 632 aa13.99□□□□□ -0.17
KNTC1-208ENST00000535410 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.99□□□□□ -0.17
KNTC1-208ENST00000535410 ZNF467Q7Z7K2 595 aaPredicted RBP13.99□□□□□ -0.17
KNTC1-208ENST00000535410 IQCA1Q86XH1 822 aa13.99□□□□□ -0.17
KNTC1-208ENST00000535410 RAVER2Q9HCJ3 691 aaKnown RBP13.99□□□□□ -0.17
KNTC1-208ENST00000535410 INCENPQ9NQS7 918 aa13.99□□□□□ -0.17
KNTC1-208ENST00000535410 COLQQ9Y215 455 aaPredicted RBP13.99□□□□□ -0.17
KNTC1-208ENST00000535410 RARBP10826 455 aa13.98□□□□□ -0.17
KNTC1-208ENST00000535410 COL6A1P12109 1028 aa13.98□□□□□ -0.17
KNTC1-208ENST00000535410 HAND2P61296 217 aa13.98□□□□□ -0.17
KNTC1-208ENST00000535410 CCDC96Q2M329 555 aa13.98□□□□□ -0.17
KNTC1-208ENST00000535410 DGKHQ86XP1 1220 aa13.98□□□□□ -0.17
KNTC1-208ENST00000535410 ACAD9Q9H845 621 aa13.98□□□□□ -0.17
KNTC1-208ENST00000535410 CNNM2Q9H8M5 875 aa13.98□□□□□ -0.17
KNTC1-208ENST00000535410 MKI67P46013 3256 aaKnown RBP13.98□□□□□ -0.17
KNTC1-208ENST00000535410 GREB1LQ9C091 1923 aaPredicted RBP13.98□□□□□ -0.17
KNTC1-208ENST00000535410 BRCA2P51587 3418 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 ZNF236Q9UL36 1845 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 SYNGAP1Q96PV0 1343 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 A0A1W2PPC1 479 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 NMT2O60551 498 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
KNTC1-208ENST00000535410 TTC22Q5TAA0 569 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 MAMDC4Q6UXC1 1216 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 CHRDL2Q6WN34 429 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 RNF180Q86T96 592 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 C7orf61Q8IZ16 206 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 TRPV1Q8NER1 839 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 TMEM47Q9BQJ4 181 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 KRT23Q9C075 422 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 SENP6Q9GZR1 1112 aaPredicted RBP13.97□□□□□ -0.17
KNTC1-208ENST00000535410 FAM184BQ9ULE4 1060 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 RIPK3Q9Y572 518 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 A0A0G2JMZ2 1700 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 RLFQ13129 1914 aa13.97□□□□□ -0.17
KNTC1-208ENST00000535410 PFASO15067 1338 aa13.96□□□□□ -0.17
KNTC1-208ENST00000535410 RAD50Q92878 1312 aa13.96□□□□□ -0.17
KNTC1-208ENST00000535410 DNAJC25-GNG10A0A024R161 153 aa13.96□□□□□ -0.17
KNTC1-208ENST00000535410 AKR1A1P14550 325 aa13.96□□□□□ -0.17
KNTC1-208ENST00000535410 KCTD1Q719H9 257 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms